Gene annotation
Transcriptome id Sobic.003G389500.1
Synonym
Functional annotation mTERF family protein, expressed
UniProt A0A1B6Q7L6
Pfam PF02536
Panther DB PTHR13068 PTHR13068:SF39
NCBI CDD -
KEGG Orthology K15032; mTERF domain-containing protein, mitochondrial
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005739mitochondrion GO:0003690double-stranded DNA binding


Orthologs (automatic annotation)
TAIR AT5G07900 : Mitochondrial transcription termination factor family protein
RAP-DB (Rice) LOC_Os02g51460.1 : mTERF family protein, expressed
MaizeGDB (Corn) Zm00025a022173
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G379800 OsFBX72 - F-box domain containing protein, expressed -
2 Sobic.001G493300 glycerol-3-phosphate acyltransferase, putative, expressed -
3 Sobic.006G261000 cytochrome P450, putative, expressed -
4 Sobic.007G075200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bifunctional purine biosynthesis protein purH, putative, expressed K00602: phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase
5 Sobic.004G196000 late embryogenesis abundant protein D-34, putative, expressed -
6 Sobic.008G192200 - -
7 Sobic.008G192100 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
8 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
9 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
10 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
11 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
12 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
13 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
14 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
15 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
16 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
17 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
18 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
19 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
20 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic003G389500 Sobic003G389500 Sobic001G379800 Sobic001G379800 Sobic003G389500--Sobic001G379800 Sobic001G493300 Sobic001G493300 Sobic003G389500--Sobic001G493300 Sobic006G261000 Sobic006G261000 Sobic003G389500--Sobic006G261000 Sobic007G075200 Sobic007G075200 Sobic003G389500--Sobic007G075200 Sobic004G196000 Sobic004G196000 Sobic003G389500--Sobic004G196000 Sobic008G192200 Sobic008G192200 Sobic003G389500--Sobic008G192200 Sobic008G192100 Sobic008G192100 Sobic003G389500--Sobic008G192100 Sobic001G272300 Sobic001G272300 Sobic003G389500--Sobic001G272300 Sobic001G379800--Sobic004G196000 Sobic001G379800--Sobic001G493300 Sobic001G379800--Sobic008G192100 Sobic001G379800--Sobic008G192200 Sobic001G379800--Sobic001G272300 Sobic001G493300--Sobic008G192200 Sobic001G493300--Sobic001G272300 Sobic006G261000--Sobic007G075200 Sobic009G214700 Sobic009G214700 Sobic006G261000--Sobic009G214700 Sobic006G018500 Sobic006G018500 Sobic006G261000--Sobic006G018500 Sobic003G241400 Sobic003G241400 Sobic006G261000--Sobic003G241400 Sobic006G261000--Sobic003G389500 Sobic006G261000--Sobic004G196000 Sobic001G267950 Sobic001G267950 Sobic006G261000--Sobic001G267950 Sobic005G199500 Sobic005G199500 Sobic006G261000--Sobic005G199500 Sobic002G213050 Sobic002G213050 Sobic006G261000--Sobic002G213050 Sobic007G075200--Sobic006G261000 Sobic007G075200--Sobic009G214700 Sobic007G075200--Sobic008G192200 Sobic003G091100 Sobic003G091100 Sobic007G075200--Sobic003G091100 SobicK042700 SobicK042700 Sobic007G075200--SobicK042700 Sobic007G075200--Sobic001G272300 Sobic004G196000--Sobic008G192100 Sobic004G196000--Sobic001G493300 Sobic004G196000--Sobic008G192200 Sobic004G196000--Sobic001G272300 Sobic008G192200--Sobic001G272300 Sobic008G192100--Sobic001G493300 Sobic002G302400 Sobic002G302400 Sobic008G192100--Sobic002G302400 Sobic008G192100--Sobic008G192200 Sobic008G192100--Sobic001G272300 Sobic001G272300--Sobic001G272300
Octagon: transcription factors


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