Gene annotation
| Transcriptome id | Sobic.007G075200.1,Sobic.007G075200.2 |
|---|---|
| Synonym | Sb07g006010 |
| Functional annotation | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543) bifunctional purine biosynthesis protein purH, putative, expressed |
| UniProt | C5YIJ5 , A0A1Z5R9F2 |
| Pfam | PF02142 PF01808 |
| Panther DB | PTHR11692 |
| NCBI CDD | - |
| KEGG Orthology | K00602; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase |
| Gene Ontology | GO:0006164; purine nucleotide biosynthetic process GO:0004643phosphoribosylaminoimidazolecarboxamide formyltransferase activity GO:0003937IMP cyclohydrolase activity |
Orthologs (automatic annotation)
| TAIR | AT2G35040 : AICARFT/IMPCHase bienzyme family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os08g10570.2 : bifunctional purine biosynthesis protein purH, putative, expressed |
| MaizeGDB (Corn) | Zm00025a054857 , Zm00025a009811 |
| Brachypodium | KQJ89323 , PNT66870 , KQJ95570 , KQJ95571 , PNT66869 |
| Barley | HORVU3Hr1G098870.9 , HORVU3Hr1G098870.8 , HORVU3Hr1G098870.5 , HORVU3Hr1G098870.4 , HORVU3Hr1G098870.7 , HORVU3Hr1G098870.6 , HORVU3Hr1G098870.1 , HORVU3Hr1G098870.3 , HORVU3Hr1G098870.2 , HORVU3Hr1G098870.10 |
| Wheat | TraesCS1A02G288300 , TraesCS1A02G288300 , TraesCS1A02G288300 , TraesCS1D02G287300 , TraesCS1D02G287300 , TraesCS1D02G287300 , TraesCS1D02G287300 , TraesCS3B02G499300 , TraesCS3B02G499300 , TraesCS3A02G459600 , TraesCS3D02G452400 , TraesCS3D02G452400 , TraesCS3D02G452400 , TraesCS3A02G459600 , TraesCS1B02G297700 , TraesCS1B02G297700 , TraesCS1B02G297700 |
| Populus | PNT15969 , PNT15968 |
JBrowse
| Sobic.007G075200 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
 |
| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.006G261000 | cytochrome P450, putative, expressed | - |
| 2 | Sobic.009G214700 | Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@bHelix-loop-helix transcription factor, putative, expressed | - |
| 3 | Sobic.008G192200 | - | - |
| 4 | Sobic.003G091100 | seven in absentia protein family domain containing protein, expressed | - |
| 5 | Sobic.K042700 | OsMADS70 - MADS-box family gene with M-alpha type-box, expressed | - |
| 6 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 7 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 8 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 9 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 10 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 11 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 12 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 13 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 14 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 15 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 16 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 17 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 18 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 19 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 20 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
Gene co-expression network
Octagon: transcription factors
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