Gene annotation
Transcriptome id Sobic.001G388100.1
Synonym Sb01g036790, ECP63, ATECP63
Functional annotation Up-reguralion under drought (PubMedID : 24916767)
Late embryogenesis abundant protein 1( (PubMedID : 26759170,(PubMedID : 24597475)
late embryogenesis abundant protein 1, putative, expressed
UniProt C5X1S0
Pfam PF02987
Panther DB PTHR23241 PTHR23241:SF11
NCBI CDD KOG4744; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G36640 : embryonic cell protein 63
RAP-DB (Rice) LOC_Os03g20680.1 : late embryogenesis abundant protein 1, putative, expressed
MaizeGDB (Corn) Zm00025a052478
Brachypodium KQK21898
Barley HORVU4Hr1G051780.2 , HORVU4Hr1G051780.1
Wheat TraesCS4D02G177500 , TraesCS4A02G129100 , TraesCS4B02G175600
Populus -


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cDNA sequences
Sobic.001G388100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G495850 - -
2 Sobic.009G150800 indole-3-acetate beta-glucosyltransferase, putative, expressed -
3 Sobic.003G241400 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@seed maturation protein PM41, putative, expressed -
4 Sobic.006G084100 expressed protein -
5 Sobic.006G261000 cytochrome P450, putative, expressed -
6 Sobic.009G214700 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@bHelix-loop-helix transcription factor, putative, expressed -
7 Sobic.007G075200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bifunctional purine biosynthesis protein purH, putative, expressed K00602: phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase
8 Sobic.006G196700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@late embryogenesis abundant group 1, putative, expressed -
9 Sobic.003G046900 expressed protein -
10 Sobic.003G429101 - -
11 Sobic.002G243100 expressed protein -
12 Sobic.008G102050 - -
13 Sobic.003G242600 - -
14 Sobic.006G278950 - -
15 Sobic.002G213050 - -
16 Sobic.006G018500 - -
17 Sobic.005G199500 OsFBL58 - F-box domain and LRR containing protein, expressed -
18 Sobic.004G196000 late embryogenesis abundant protein D-34, putative, expressed -
19 Sobic.004G196900 - -
20 Sobic.007G069750 - -


Gene co-expression network
sample Sobic001G388100 Sobic001G388100 Sobic001G495850 Sobic001G495850 Sobic001G388100--Sobic001G495850 Sobic009G150800 Sobic009G150800 Sobic001G388100--Sobic009G150800 Sobic003G241400 Sobic003G241400 Sobic001G388100--Sobic003G241400 Sobic006G084100 Sobic006G084100 Sobic001G388100--Sobic006G084100 Sobic006G261000 Sobic006G261000 Sobic001G388100--Sobic006G261000 Sobic009G214700 Sobic009G214700 Sobic001G388100--Sobic009G214700 Sobic007G075200 Sobic007G075200 Sobic001G388100--Sobic007G075200 Sobic006G196700 Sobic006G196700 Sobic001G388100--Sobic006G196700 Sobic003G046900 Sobic003G046900 Sobic001G388100--Sobic003G046900 Sobic001G495850--Sobic001G388100 Sobic001G495850--Sobic009G150800 Sobic001G495850--Sobic003G241400 Sobic001G495850--Sobic006G261000 Sobic002G243100 Sobic002G243100 Sobic001G495850--Sobic002G243100 Sobic001G495850--Sobic006G084100 Sobic001G495850--Sobic009G214700 Sobic004G196900 Sobic004G196900 Sobic001G495850--Sobic004G196900 Sobic008G102050 Sobic008G102050 Sobic001G495850--Sobic008G102050 Sobic009G150800--Sobic001G388100 Sobic009G150800--Sobic003G241400 Sobic009G150800--Sobic001G495850 Sobic009G150800--Sobic006G261000 Sobic009G150800--Sobic009G214700 Sobic009G150800--Sobic007G075200 Sobic002G213050 Sobic002G213050 Sobic009G150800--Sobic002G213050 Sobic006G018500 Sobic006G018500 Sobic009G150800--Sobic006G018500 Sobic005G199500 Sobic005G199500 Sobic009G150800--Sobic005G199500 Sobic003G241400--Sobic006G261000 Sobic003G241400--Sobic009G150800 Sobic003G241400--Sobic001G388100 Sobic003G241400--Sobic001G495850 Sobic003G241400--Sobic009G214700 Sobic003G241400--Sobic007G075200 Sobic003G389500 Sobic003G389500 Sobic003G241400--Sobic003G389500 Sobic003G241400--Sobic006G196700 Sobic004G196000 Sobic004G196000 Sobic003G241400--Sobic004G196000 Sobic006G084100--Sobic001G388100 Sobic006G278950 Sobic006G278950 Sobic006G084100--Sobic006G278950 Sobic001G211000 Sobic001G211000 Sobic006G084100--Sobic001G211000 Sobic006G084100--Sobic001G495850 Sobic003G242600 Sobic003G242600 Sobic006G084100--Sobic003G242600 Sobic010G090800 Sobic010G090800 Sobic006G084100--Sobic010G090800 Sobic001G311200 Sobic001G311200 Sobic006G084100--Sobic001G311200 Sobic006G084100--Sobic009G150800 Sobic007G004900 Sobic007G004900 Sobic006G084100--Sobic007G004900 Sobic006G261000--Sobic007G075200 Sobic006G261000--Sobic009G214700 Sobic006G261000--Sobic006G018500 Sobic006G261000--Sobic003G241400 Sobic006G261000--Sobic003G389500 Sobic006G261000--Sobic004G196000 Sobic001G267950 Sobic001G267950 Sobic006G261000--Sobic001G267950 Sobic006G261000--Sobic005G199500 Sobic006G261000--Sobic002G213050 Sobic009G214700--Sobic006G261000 Sobic009G214700--Sobic007G075200 Sobic009G214700--Sobic001G267950 Sobic009G214700--Sobic003G046900 Sobic009G214700--Sobic006G018500 Sobic009G214700--Sobic005G199500 Sobic003G049100 Sobic003G049100 Sobic009G214700--Sobic003G049100 Sobic009G214700--Sobic004G196000 Sobic008G192200 Sobic008G192200 Sobic009G214700--Sobic008G192200 Sobic007G075200--Sobic006G261000 Sobic007G075200--Sobic009G214700 Sobic007G075200--Sobic008G192200 Sobic003G091100 Sobic003G091100 Sobic007G075200--Sobic003G091100 SobicK042700 SobicK042700 Sobic007G075200--SobicK042700 Sobic001G272300 Sobic001G272300 Sobic007G075200--Sobic001G272300 Sobic006G196700--Sobic006G261000 Sobic002G269700 Sobic002G269700 Sobic006G196700--Sobic002G269700 Sobic006G196700--Sobic003G241400 Sobic006G196700--Sobic007G075200 Sobic006G196700--Sobic006G018500 Sobic006G196700--Sobic002G213050 Sobic006G196700--Sobic009G214700 Sobic006G196700--Sobic005G199500 Sobic006G196700--Sobic003G389500 Sobic003G046900--Sobic004G196000 Sobic003G046900--Sobic008G192200 Sobic003G046900--Sobic001G272300
Octagon: transcription factors


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