Gene annotation
Transcriptome id Sobic.004G196900.1
Synonym Sb04g024380
Functional annotation -
UniProt C5XWD8
Pfam -
Panther DB PTHR37389
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G196900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G089300 LTPL54 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
2 Sobic.002G243100 expressed protein -
3 Sobic.006G229400 PB1 domain containing protein, expressed -
4 Sobic.003G241400 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@seed maturation protein PM41, putative, expressed -
5 Sobic.001G379800 OsFBX72 - F-box domain containing protein, expressed -
6 Sobic.004G196000 late embryogenesis abundant protein D-34, putative, expressed -
7 Sobic.001G495850 - -
8 Sobic.006G236100 - -
9 Sobic.006G261000 cytochrome P450, putative, expressed -
10 Sobic.003G389500 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
11 Sobic.001G450100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450 protein, putative, expressed -
12 Sobic.003G063600 expressed protein -
13 Sobic.009G150800 indole-3-acetate beta-glucosyltransferase, putative, expressed -
14 Sobic.001G388100 Up-reguralion under drought(PubMedID : 24916767)@Late embryogenesis abundant protein 1("PubMedID : 26759170,PubMedID : 24597475")@late embryogenesis abundant protein 1, putative, expressed -
15 Sobic.008G192100 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
16 Sobic.009G185000 - -
17 Sobic.007G088300 late embryogenesis abundant group 1, putative, expressed -
18 Sobic.003G046900 expressed protein -
19 Sobic.005G029300 - -
20 Sobic.004G295200 expressed protein -


Gene co-expression network
sample Sobic004G196900 Sobic004G196900 Sobic002G089300 Sobic002G089300 Sobic004G196900--Sobic002G089300 Sobic002G243100 Sobic002G243100 Sobic004G196900--Sobic002G243100 Sobic006G229400 Sobic006G229400 Sobic004G196900--Sobic006G229400 Sobic003G241400 Sobic003G241400 Sobic004G196900--Sobic003G241400 Sobic001G379800 Sobic001G379800 Sobic004G196900--Sobic001G379800 Sobic004G196000 Sobic004G196000 Sobic004G196900--Sobic004G196000 Sobic001G495850 Sobic001G495850 Sobic004G196900--Sobic001G495850 Sobic006G236100 Sobic006G236100 Sobic004G196900--Sobic006G236100 Sobic006G261000 Sobic006G261000 Sobic004G196900--Sobic006G261000 Sobic002G089300--Sobic004G196900 Sobic002G089300--Sobic006G229400 Sobic002G089300--Sobic001G379800 Sobic002G089300--Sobic004G196000 Sobic001G450100 Sobic001G450100 Sobic002G089300--Sobic001G450100 Sobic003G389500 Sobic003G389500 Sobic002G089300--Sobic003G389500 Sobic003G063600 Sobic003G063600 Sobic002G089300--Sobic003G063600 Sobic005G029300 Sobic005G029300 Sobic002G089300--Sobic005G029300 Sobic002G089300--Sobic006G236100 Sobic002G243100--Sobic004G196900 Sobic002G243100--Sobic001G495850 Sobic001G388100 Sobic001G388100 Sobic002G243100--Sobic001G388100 Sobic002G243100--Sobic003G241400 Sobic001G515700 Sobic001G515700 Sobic002G243100--Sobic001G515700 Sobic007G088300 Sobic007G088300 Sobic002G243100--Sobic007G088300 Sobic009G150800 Sobic009G150800 Sobic002G243100--Sobic009G150800 Sobic002G243100--Sobic002G089300 Sobic001G090900 Sobic001G090900 Sobic002G243100--Sobic001G090900 Sobic006G229400--Sobic002G089300 Sobic006G229400--Sobic004G196900 Sobic009G185000 Sobic009G185000 Sobic006G229400--Sobic009G185000 Sobic006G229400--Sobic001G379800 Sobic006G229400--Sobic003G063600 Sobic006G229400--Sobic004G196000 Sobic006G229400--Sobic003G389500 Sobic006G229400--Sobic005G029300 Sobic006G178200 Sobic006G178200 Sobic006G229400--Sobic006G178200 Sobic003G241400--Sobic006G261000 Sobic003G241400--Sobic009G150800 Sobic003G241400--Sobic001G388100 Sobic003G241400--Sobic001G495850 Sobic009G214700 Sobic009G214700 Sobic003G241400--Sobic009G214700 Sobic007G075200 Sobic007G075200 Sobic003G241400--Sobic007G075200 Sobic003G241400--Sobic003G389500 Sobic006G196700 Sobic006G196700 Sobic003G241400--Sobic006G196700 Sobic003G241400--Sobic004G196000 Sobic001G379800--Sobic004G196000 Sobic001G493300 Sobic001G493300 Sobic001G379800--Sobic001G493300 Sobic008G192100 Sobic008G192100 Sobic001G379800--Sobic008G192100 Sobic008G192200 Sobic008G192200 Sobic001G379800--Sobic008G192200 Sobic001G272300 Sobic001G272300 Sobic001G379800--Sobic001G272300 Sobic004G196000--Sobic008G192100 Sobic004G196000--Sobic001G493300 Sobic004G196000--Sobic008G192200 Sobic004G196000--Sobic001G272300 Sobic001G495850--Sobic001G388100 Sobic001G495850--Sobic009G150800 Sobic001G495850--Sobic003G241400 Sobic001G495850--Sobic006G261000 Sobic001G495850--Sobic002G243100 Sobic006G084100 Sobic006G084100 Sobic001G495850--Sobic006G084100 Sobic001G495850--Sobic009G214700 Sobic001G495850--Sobic004G196900 Sobic008G102050 Sobic008G102050 Sobic001G495850--Sobic008G102050 Sobic006G236100--Sobic001G379800 Sobic006G236100--Sobic004G196000 Sobic006G236100--Sobic001G493300 Sobic002G069601 Sobic002G069601 Sobic006G236100--Sobic002G069601 Sobic006G236100--Sobic008G192200 Sobic004G023733 Sobic004G023733 Sobic006G236100--Sobic004G023733 Sobic002G035766 Sobic002G035766 Sobic006G236100--Sobic002G035766 Sobic003G141550 Sobic003G141550 Sobic006G236100--Sobic003G141550 Sobic003G058400 Sobic003G058400 Sobic006G236100--Sobic003G058400 Sobic006G261000--Sobic007G075200 Sobic006G261000--Sobic009G214700 Sobic006G018500 Sobic006G018500 Sobic006G261000--Sobic006G018500 Sobic006G261000--Sobic003G241400 Sobic006G261000--Sobic003G389500 Sobic006G261000--Sobic004G196000 Sobic001G267950 Sobic001G267950 Sobic006G261000--Sobic001G267950 Sobic005G199500 Sobic005G199500 Sobic006G261000--Sobic005G199500 Sobic002G213050 Sobic002G213050 Sobic006G261000--Sobic002G213050
Octagon: transcription factors


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