Gene annotation
Transcriptome id Sobic.002G089300.2
Synonym
Functional annotation LTPL54 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed
UniProt A0A1W0W316
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g14140.1 : LTPL54 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK20268
Barley -
Wheat TraesCS2A02G118200 , TraesCS2D02G116800 , TraesCS2B02G138300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G196900 - -
2 Sobic.006G229400 PB1 domain containing protein, expressed -
3 Sobic.001G379800 OsFBX72 - F-box domain containing protein, expressed -
4 Sobic.004G196000 late embryogenesis abundant protein D-34, putative, expressed -
5 Sobic.001G450100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450 protein, putative, expressed -
6 Sobic.003G389500 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
7 Sobic.003G063600 expressed protein -
8 Sobic.005G029300 - -
9 Sobic.006G236100 - -
10 Sobic.009G185000 - -
11 Sobic.008G192100 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
12 Sobic.001G493300 glycerol-3-phosphate acyltransferase, putative, expressed -
13 Sobic.003G241400 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@seed maturation protein PM41, putative, expressed -
14 Sobic.006G261000 cytochrome P450, putative, expressed -
15 Sobic.008G192200 - -
16 Sobic.004G295200 expressed protein -
17 Sobic.002G143600 expressed protein -
18 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
19 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
20 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic002G089300 Sobic002G089300 Sobic004G196900 Sobic004G196900 Sobic002G089300--Sobic004G196900 Sobic006G229400 Sobic006G229400 Sobic002G089300--Sobic006G229400 Sobic001G379800 Sobic001G379800 Sobic002G089300--Sobic001G379800 Sobic004G196000 Sobic004G196000 Sobic002G089300--Sobic004G196000 Sobic001G450100 Sobic001G450100 Sobic002G089300--Sobic001G450100 Sobic003G389500 Sobic003G389500 Sobic002G089300--Sobic003G389500 Sobic003G063600 Sobic003G063600 Sobic002G089300--Sobic003G063600 Sobic005G029300 Sobic005G029300 Sobic002G089300--Sobic005G029300 Sobic006G236100 Sobic006G236100 Sobic002G089300--Sobic006G236100 Sobic004G196900--Sobic002G089300 Sobic002G243100 Sobic002G243100 Sobic004G196900--Sobic002G243100 Sobic004G196900--Sobic006G229400 Sobic003G241400 Sobic003G241400 Sobic004G196900--Sobic003G241400 Sobic004G196900--Sobic001G379800 Sobic004G196900--Sobic004G196000 Sobic001G495850 Sobic001G495850 Sobic004G196900--Sobic001G495850 Sobic004G196900--Sobic006G236100 Sobic006G261000 Sobic006G261000 Sobic004G196900--Sobic006G261000 Sobic006G229400--Sobic002G089300 Sobic006G229400--Sobic004G196900 Sobic009G185000 Sobic009G185000 Sobic006G229400--Sobic009G185000 Sobic006G229400--Sobic001G379800 Sobic006G229400--Sobic003G063600 Sobic006G229400--Sobic004G196000 Sobic006G229400--Sobic003G389500 Sobic006G229400--Sobic005G029300 Sobic006G178200 Sobic006G178200 Sobic006G229400--Sobic006G178200 Sobic001G379800--Sobic004G196000 Sobic001G493300 Sobic001G493300 Sobic001G379800--Sobic001G493300 Sobic008G192100 Sobic008G192100 Sobic001G379800--Sobic008G192100 Sobic008G192200 Sobic008G192200 Sobic001G379800--Sobic008G192200 Sobic001G272300 Sobic001G272300 Sobic001G379800--Sobic001G272300 Sobic004G196000--Sobic008G192100 Sobic004G196000--Sobic001G493300 Sobic004G196000--Sobic008G192200 Sobic004G196000--Sobic001G272300 Sobic001G450100--Sobic003G063600 Sobic001G450100--Sobic001G379800 Sobic001G450100--Sobic004G196000 Sobic008G032850 Sobic008G032850 Sobic001G450100--Sobic008G032850 Sobic004G067850 Sobic004G067850 Sobic001G450100--Sobic004G067850 Sobic001G450100--Sobic008G192100 Sobic001G450100--Sobic001G493300 Sobic003G058400 Sobic003G058400 Sobic001G450100--Sobic003G058400 Sobic002G302400 Sobic002G302400 Sobic001G450100--Sobic002G302400 Sobic003G389500--Sobic001G379800 Sobic003G389500--Sobic001G493300 Sobic003G389500--Sobic006G261000 Sobic007G075200 Sobic007G075200 Sobic003G389500--Sobic007G075200 Sobic003G389500--Sobic004G196000 Sobic003G389500--Sobic008G192200 Sobic003G389500--Sobic008G192100 Sobic003G389500--Sobic001G272300 Sobic003G063600--Sobic001G493300 Sobic003G063600--Sobic003G058400 Sobic004G289700 Sobic004G289700 Sobic003G063600--Sobic004G289700 Sobic001G452400 Sobic001G452400 Sobic003G063600--Sobic001G452400 Sobic003G141550 Sobic003G141550 Sobic003G063600--Sobic003G141550 Sobic003G063600--Sobic004G196000 Sobic003G063600--Sobic008G192100 Sobic003G063600--Sobic008G192200 Sobic002G081000 Sobic002G081000 Sobic003G063600--Sobic002G081000 Sobic005G029300--Sobic002G089300 Sobic005G029300--Sobic004G196900 Sobic005G029300--Sobic006G229400 Sobic005G029300--Sobic009G185000 Sobic005G029300--Sobic001G379800 Sobic002G282800 Sobic002G282800 Sobic005G029300--Sobic002G282800 Sobic005G029300--Sobic001G450100 Sobic005G102600 Sobic005G102600 Sobic005G029300--Sobic005G102600 Sobic001G090900 Sobic001G090900 Sobic005G029300--Sobic001G090900 Sobic006G236100--Sobic001G379800 Sobic006G236100--Sobic004G196000 Sobic006G236100--Sobic001G493300 Sobic002G069601 Sobic002G069601 Sobic006G236100--Sobic002G069601 Sobic006G236100--Sobic008G192200 Sobic004G023733 Sobic004G023733 Sobic006G236100--Sobic004G023733 Sobic002G035766 Sobic002G035766 Sobic006G236100--Sobic002G035766 Sobic006G236100--Sobic003G141550 Sobic006G236100--Sobic003G058400
Octagon: transcription factors


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