Gene annotation
| Transcriptome id | Sobic.001G450100.1 |
|---|---|
| Synonym | Sb01g042310, CYP94D2 |
| Functional annotation | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543) cytochrome P450 protein, putative, expressed |
| UniProt | C5WSL5 |
| Pfam | PF00067 |
| Panther DB | PTHR24296 PTHR24296:SF0 |
| NCBI CDD | KOG0157; Cytochrome P450 CYP4/CYP19/CYP26 subfamilies |
| KEGG Orthology | - |
| Gene Ontology | GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding |
Orthologs (automatic annotation)
| TAIR | AT3G56630 : cytochrome P450, family 94, subfamily D, polypeptide 2 |
|---|---|
| RAP-DB (Rice) | LOC_Os03g12260.1 : cytochrome P450 protein, putative, expressed |
| MaizeGDB (Corn) | Zm00025a001389 , Zm00025a049885 , Zm00025a001368 |
| Brachypodium | KQK22828 , KQK10207 |
| Barley | HORVU4Hr1G066870.1 , HORVU4Hr1G066880.2 , HORVU4Hr1G066880.1 , HORVU3Hr1G078810.1 , HORVU2Hr1G124430.1 , HORVU2Hr1G124430.2 |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.003G063600 | expressed protein | - |
| 2 | Sobic.001G379800 | OsFBX72 - F-box domain containing protein, expressed | - |
| 3 | Sobic.004G196000 | late embryogenesis abundant protein D-34, putative, expressed | - |
| 4 | Sobic.008G032850 | - | - |
| 5 | Sobic.004G067850 | - | - |
| 6 | Sobic.008G192100 | Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein | - |
| 7 | Sobic.001G493300 | glycerol-3-phosphate acyltransferase, putative, expressed | - |
| 8 | Sobic.003G058400 | annexin, putative, expressed | - |
| 9 | Sobic.002G302400 | SAM dependent carboxyl methyltransferase, putative, expressed | - |
| 10 | Sobic.003G141550 | - | - |
| 11 | Sobic.008G192200 | - | - |
| 12 | Sobic.004G289700 | C2 domain containing protein, putative, expressed | - |
| 13 | Sobic.K042700 | OsMADS70 - MADS-box family gene with M-alpha type-box, expressed | - |
| 14 | Sobic.007G100275 | - | - |
| 15 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 16 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 17 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 18 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 19 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
| 20 | Sobic.001G272300 | OsFBX356 - F-box domain containing protein, expressed | - |
Gene co-expression network
Octagon: transcription factors
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