Gene annotation
Transcriptome id
Sobic.003G241400.1 Synonym
Sb03g029830, Functional annotation
Up-reguralion under drought (PubMedID : 24916767 )Up-reguralion under combine stress of drought and heat (PubMedID : 24916767 )UniProt
C5XF97 Pfam
- Panther DB
PTHR36012
PTHR36012:SF2 NCBI CDD
- KEGG Orthology
- Gene Ontology
-
Orthologs (automatic annotation)
JBrowse
Expression pattern by RNA-Seq analysis
FPKM plot
Find similar expressed genes
Top 20 genes with similar expressed profiles
Rank
Gene
Function
KEGG orthology 1
Sobic.006G261000 cytochrome P450, putative, expressed
- 2
Sobic.009G150800 indole-3-acetate beta-glucosyltransferase, putative, expressed
- 3
Sobic.001G388100 Up-reguralion under drought(PubMedID : 24916767)@Late embryogenesis abundant protein 1("PubMedID : 26759170,PubMedID : 24597475")@late embryogenesis abundant protein 1, putative, expressed
- 4
Sobic.001G495850 -
- 5
Sobic.009G214700 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@bHelix-loop-helix transcription factor, putative, expressed
- 6
Sobic.007G075200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bifunctional purine biosynthesis protein purH, putative, expressed
K00602 : phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase 7
Sobic.003G389500 mTERF family protein, expressed
K15032 : mTERF domain-containing protein, mitochondrial8
Sobic.006G196700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@late embryogenesis abundant group 1, putative, expressed
- 9
Sobic.004G196000 late embryogenesis abundant protein D-34, putative, expressed
- 10
Sobic.005G199500 OsFBL58 - F-box domain and LRR containing protein, expressed
- 11
Sobic.006G018500 -
- 12
Sobic.002G213050 -
- 13
Sobic.003G046900 expressed protein
- 14
Sobic.006G262001 -
- 15
Sobic.001G379800 OsFBX72 - F-box domain containing protein, expressed
- 16
Sobic.007G069750 -
- 17
Sobic.001G267950 -
- 18
Sobic.001G528000 SNARE domain containing protein, putative, expressed
K08503 : syntaxin of plants SYP519
Sobic.004G196900 -
- 20
Sobic.008G192100 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein
-
Gene co-expression network
sample
Sobic003G241400
Sobic003G241400
Sobic006G261000
Sobic006G261000
Sobic003G241400--Sobic006G261000
Sobic009G150800
Sobic009G150800
Sobic003G241400--Sobic009G150800
Sobic001G388100
Sobic001G388100
Sobic003G241400--Sobic001G388100
Sobic001G495850
Sobic001G495850
Sobic003G241400--Sobic001G495850
Sobic009G214700
Sobic009G214700
Sobic003G241400--Sobic009G214700
Sobic007G075200
Sobic007G075200
Sobic003G241400--Sobic007G075200
Sobic003G389500
Sobic003G389500
Sobic003G241400--Sobic003G389500
Sobic006G196700
Sobic006G196700
Sobic003G241400--Sobic006G196700
Sobic004G196000
Sobic004G196000
Sobic003G241400--Sobic004G196000
Sobic006G261000--Sobic007G075200
Sobic006G261000--Sobic009G214700
Sobic006G018500
Sobic006G018500
Sobic006G261000--Sobic006G018500
Sobic006G261000--Sobic003G241400
Sobic006G261000--Sobic003G389500
Sobic006G261000--Sobic004G196000
Sobic001G267950
Sobic001G267950
Sobic006G261000--Sobic001G267950
Sobic005G199500
Sobic005G199500
Sobic006G261000--Sobic005G199500
Sobic002G213050
Sobic002G213050
Sobic006G261000--Sobic002G213050
Sobic009G150800--Sobic001G388100
Sobic009G150800--Sobic003G241400
Sobic009G150800--Sobic001G495850
Sobic009G150800--Sobic006G261000
Sobic009G150800--Sobic009G214700
Sobic009G150800--Sobic007G075200
Sobic009G150800--Sobic002G213050
Sobic009G150800--Sobic006G018500
Sobic009G150800--Sobic005G199500
Sobic001G388100--Sobic001G495850
Sobic001G388100--Sobic009G150800
Sobic001G388100--Sobic003G241400
Sobic006G084100
Sobic006G084100
Sobic001G388100--Sobic006G084100
Sobic001G388100--Sobic006G261000
Sobic001G388100--Sobic009G214700
Sobic001G388100--Sobic007G075200
Sobic001G388100--Sobic006G196700
Sobic003G046900
Sobic003G046900
Sobic001G388100--Sobic003G046900
Sobic001G495850--Sobic001G388100
Sobic001G495850--Sobic009G150800
Sobic001G495850--Sobic003G241400
Sobic001G495850--Sobic006G261000
Sobic002G243100
Sobic002G243100
Sobic001G495850--Sobic002G243100
Sobic001G495850--Sobic006G084100
Sobic001G495850--Sobic009G214700
Sobic004G196900
Sobic004G196900
Sobic001G495850--Sobic004G196900
Sobic008G102050
Sobic008G102050
Sobic001G495850--Sobic008G102050
Sobic009G214700--Sobic006G261000
Sobic009G214700--Sobic007G075200
Sobic009G214700--Sobic001G267950
Sobic009G214700--Sobic003G046900
Sobic009G214700--Sobic006G018500
Sobic009G214700--Sobic005G199500
Sobic003G049100
Sobic003G049100
Sobic009G214700--Sobic003G049100
Sobic009G214700--Sobic004G196000
Sobic008G192200
Sobic008G192200
Sobic009G214700--Sobic008G192200
Sobic007G075200--Sobic006G261000
Sobic007G075200--Sobic009G214700
Sobic007G075200--Sobic008G192200
Sobic003G091100
Sobic003G091100
Sobic007G075200--Sobic003G091100
SobicK042700
SobicK042700
Sobic007G075200--SobicK042700
Sobic001G272300
Sobic001G272300
Sobic007G075200--Sobic001G272300
Sobic001G379800
Sobic001G379800
Sobic003G389500--Sobic001G379800
Sobic001G493300
Sobic001G493300
Sobic003G389500--Sobic001G493300
Sobic003G389500--Sobic006G261000
Sobic003G389500--Sobic007G075200
Sobic003G389500--Sobic004G196000
Sobic003G389500--Sobic008G192200
Sobic008G192100
Sobic008G192100
Sobic003G389500--Sobic008G192100
Sobic003G389500--Sobic001G272300
Sobic006G196700--Sobic006G261000
Sobic002G269700
Sobic002G269700
Sobic006G196700--Sobic002G269700
Sobic006G196700--Sobic003G241400
Sobic006G196700--Sobic007G075200
Sobic006G196700--Sobic006G018500
Sobic006G196700--Sobic002G213050
Sobic006G196700--Sobic009G214700
Sobic006G196700--Sobic005G199500
Sobic006G196700--Sobic003G389500
Sobic004G196000--Sobic008G192100
Sobic004G196000--Sobic001G493300
Sobic004G196000--Sobic008G192200
Sobic004G196000--Sobic001G272300
Octagon: transcription factors
