Gene annotation
Transcriptome id Sobic.001G109000.1
Synonym Sb01g009730
Functional annotation Up-reguralion under drought (PubMedID : 24916767)
expressed protein
UniProt C5WMW4
Pfam -
Panther DB PTHR36410 PTHR36410:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G66780 : -
RAP-DB (Rice) LOC_Os03g51350.1 : expressed protein
MaizeGDB (Corn) Zm00025a016915
Brachypodium KQK13464
Barley HORVU4Hr1G008990.1
Wheat TraesCS4A02G260500 , TraesCS4D02G054100 , TraesCS4B02G053900
Populus -


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cDNA sequences
Sobic.001G109000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G492000 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@embryonic protein DC-8, putative, expressed -
2 Sobic.001G354800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.009G215700 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@late embryogenesis abundant protein, group 3, putative, expressed -
4 Sobic.002G151200 seed maturation protein LEA 4, putative, expressed -
5 Sobic.009G168800 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@phosphatidylethanolamine-binding protein, putative, expressed K06910: PEBP1, phosphatidylethanolamine-binding protein
6 Sobic.006G104000 ethylene-insensitive 3, putative, expressed K14514: ethylene-insensitive protein 3
7 Sobic.001G307000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.001G200700 expressed protein -
9 Sobic.004G142500 Up-reguralion under drought(PubMedID : 24916767)@late embryogenesis abundant protein D-34, putative, expressed -
10 Sobic.004G047900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed -
11 Sobic.006G269501 - -
12 Sobic.002G132500 - -
13 Sobic.006G118500 OsFBDUF36 - F-box and DUF domain containing protein, expressed -
14 Sobic.004G243300 expressed protein -
15 Sobic.005G138500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.003G194400 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
17 Sobic.003G011400 similar to Os01g0225600 protein(PubMedID : 29862293)@late embryogenesis abundant protein, putative, expressed -
18 Sobic.004G101400 Up-reguralion under drought(PubMedID : 24916767)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
19 Sobic.006G248600 expressed protein -
20 Sobic.007G088300 late embryogenesis abundant group 1, putative, expressed -


Gene co-expression network
sample Sobic001G109000 Sobic001G109000 Sobic001G492000 Sobic001G492000 Sobic001G109000--Sobic001G492000 Sobic001G354800 Sobic001G354800 Sobic001G109000--Sobic001G354800 Sobic009G215700 Sobic009G215700 Sobic001G109000--Sobic009G215700 Sobic002G151200 Sobic002G151200 Sobic001G109000--Sobic002G151200 Sobic009G168800 Sobic009G168800 Sobic001G109000--Sobic009G168800 Sobic006G104000 Sobic006G104000 Sobic001G109000--Sobic006G104000 Sobic001G307000 Sobic001G307000 Sobic001G109000--Sobic001G307000 Sobic001G200700 Sobic001G200700 Sobic001G109000--Sobic001G200700 Sobic004G142500 Sobic004G142500 Sobic001G109000--Sobic004G142500 Sobic001G492000--Sobic001G109000 Sobic001G492000--Sobic009G215700 Sobic001G492000--Sobic002G151200 Sobic001G492000--Sobic001G354800 Sobic001G492000--Sobic004G142500 Sobic007G088300 Sobic007G088300 Sobic001G492000--Sobic007G088300 Sobic001G492000--Sobic009G168800 Sobic006G269501 Sobic006G269501 Sobic001G492000--Sobic006G269501 Sobic006G118500 Sobic006G118500 Sobic001G492000--Sobic006G118500 Sobic001G354800--Sobic001G109000 Sobic001G354800--Sobic001G492000 Sobic001G354800--Sobic009G168800 Sobic001G354800--Sobic004G142500 Sobic001G354800--Sobic002G151200 Sobic001G354800--Sobic006G269501 Sobic001G354800--Sobic001G307000 Sobic005G138500 Sobic005G138500 Sobic001G354800--Sobic005G138500 Sobic001G354800--Sobic009G215700 Sobic009G215700--Sobic001G492000 Sobic009G215700--Sobic002G151200 Sobic009G215700--Sobic001G109000 Sobic009G215700--Sobic006G269501 Sobic009G215700--Sobic001G354800 Sobic009G215700--Sobic001G200700 Sobic002G132500 Sobic002G132500 Sobic009G215700--Sobic002G132500 Sobic009G215700--Sobic006G118500 Sobic009G215700--Sobic006G104000 Sobic002G151200--Sobic006G269501 Sobic002G151200--Sobic001G492000 Sobic002G151200--Sobic009G215700 Sobic002G151200--Sobic001G109000 Sobic002G151200--Sobic005G138500 Sobic002G151200--Sobic001G354800 Sobic004G243300 Sobic004G243300 Sobic002G151200--Sobic004G243300 Sobic002G383500 Sobic002G383500 Sobic002G151200--Sobic002G383500 Sobic007G004900 Sobic007G004900 Sobic002G151200--Sobic007G004900 Sobic009G168800--Sobic001G354800 Sobic009G168800--Sobic001G109000 Sobic009G168800--Sobic001G492000 Sobic009G168800--Sobic004G142500 Sobic009G168800--Sobic002G151200 Sobic009G168800--Sobic006G269501 Sobic009G168800--Sobic005G138500 Sobic009G168800--Sobic001G307000 Sobic004G047900 Sobic004G047900 Sobic009G168800--Sobic004G047900 Sobic009G046200 Sobic009G046200 Sobic006G104000--Sobic009G046200 Sobic006G104000--Sobic002G132500 Sobic003G011400 Sobic003G011400 Sobic006G104000--Sobic003G011400 Sobic003G024600 Sobic003G024600 Sobic006G104000--Sobic003G024600 Sobic001G466450 Sobic001G466450 Sobic006G104000--Sobic001G466450 Sobic001G307000--Sobic004G047900 Sobic003G292400 Sobic003G292400 Sobic001G307000--Sobic003G292400 Sobic003G194400 Sobic003G194400 Sobic001G307000--Sobic003G194400 Sobic010G101300 Sobic010G101300 Sobic001G307000--Sobic010G101300 Sobic001G307000--Sobic001G200700 Sobic001G307000--Sobic004G243300 Sobic006G114700 Sobic006G114700 Sobic001G307000--Sobic006G114700 Sobic001G307000--Sobic006G104000 Sobic001G307000--Sobic003G011400 Sobic001G200700--Sobic003G011400 Sobic001G200700--Sobic003G194400 Sobic001G200700--Sobic003G292400 Sobic001G200700--Sobic010G101300 Sobic001G200700--Sobic002G132500 Sobic001G200700--Sobic009G046200 Sobic001G200700--Sobic006G104000 Sobic005G183200 Sobic005G183200 Sobic001G200700--Sobic005G183200 Sobic009G116700 Sobic009G116700 Sobic001G200700--Sobic009G116700 Sobic004G142500--Sobic001G354800 Sobic004G142500--Sobic001G492000 Sobic004G142500--Sobic009G168800 Sobic003G271800 Sobic003G271800 Sobic004G142500--Sobic003G271800 Sobic004G142500--Sobic001G109000 Sobic004G142500--Sobic002G383500 Sobic004G142500--Sobic005G138500 Sobic004G142500--Sobic006G269501 Sobic004G142500--Sobic002G151200
Octagon: transcription factors


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