Gene annotation
Transcriptome id Sobic.004G101400.1
Synonym HSFC1, Sb04g008300, AT-HSFC1
Functional annotation Up-reguralion under drought (PubMedID : 24916767)
HSF-type DNA-binding domain containing protein, expressed
UniProt A0A194YNU0
Pfam PF00447
Panther DB PTHR10015 PTHR10015:SF171
NCBI CDD -
KEGG Orthology K09419; heat shock transcription factor, other eukaryote
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005634nucleus GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT3G24520 : heat shock transcription factor C1
RAP-DB (Rice) LOC_Os02g13800.1 : HSF-type DNA-binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a008110 , Zm00025a020093 , Zm00025a051078
Brachypodium KQK13249 , KQK14978 , KQK14979 , KQK08811 , KQK18031 , KQK18032 , KQK13250 , KQK23525 , KQK23526 , PNT74158 , PNT74157 , PNT74156 , PNT74155 , PNT72425 , KQJ94147 , KQJ90505
Barley HORVU1Hr1G083420.8 , HORVU1Hr1G083420.9 , HORVU1Hr1G083420.4 , HORVU1Hr1G083420.5 , HORVU1Hr1G083420.6 , HORVU1Hr1G083420.7 , HORVU1Hr1G083420.1 , HORVU1Hr1G083420.2 , HORVU1Hr1G083420.3 , HORVU1Hr1G083420.16 , HORVU1Hr1G083420.17 , HORVU1Hr1G083420.14 , HORVU1Hr1G083420.15 , HORVU1Hr1G083420.12 , HORVU1Hr1G083420.13 , HORVU1Hr1G083420.10 , HORVU1Hr1G083420.11 , HORVU7Hr1G088920.2 , HORVU7Hr1G088920.3 , HORVU7Hr1G088920.1 , HORVU3Hr1G088890.2 , HORVU3Hr1G088890.1 , HORVU4Hr1G073650.5 , HORVU4Hr1G073650.4 , HORVU4Hr1G073650.7 , HORVU4Hr1G073650.6 , HORVU4Hr1G073650.1 , HORVU4Hr1G073650.3 , HORVU4Hr1G073650.2 , HORVU3Hr1G055960.4 , HORVU3Hr1G055960.5 , HORVU3Hr1G055960.1 , HORVU3Hr1G055960.2 , HORVU3Hr1G055960.3 , HORVU3Hr1G069590.2 , HORVU3Hr1G069590.3 , HORVU3Hr1G069590.1 , HORVU3Hr1G069590.4
Wheat TraesCS3A02G393200 , TraesCS3A02G280800 , TraesCS1A02G375600 , TraesCS5D02G393200 , TraesCS3D02G386000 , TraesCS1A02G375600 , TraesCS5A02G383800 , TraesCS7A02G355300 , TraesCS7D02G367700 , TraesCS4A02G027700 , TraesCS3A02G229000 , TraesCS3B02G255600 , TraesCS3D02G227200 , TraesCS3D02G280600 , TraesCS7B02G272500 , TraesCS3D02G385900 , TraesCS1D02G382900 , TraesCS1B02G396000
Populus -


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cDNA sequences
Sobic.004G101400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G409400 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@OsRCI2-5 - Putative low temperature and salt responsive protein, expressed -
2 Sobic.002G107400 aldehyde oxidase, putative, expressed -
3 Sobic.009G046200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@peripheral-type benzodiazepine receptor, putative, expressed -
4 Sobic.006G104000 ethylene-insensitive 3, putative, expressed K14514: ethylene-insensitive protein 3
5 Sobic.009G015500 - -
6 Sobic.009G158600 - -
7 Sobic.003G011400 similar to Os01g0225600 protein(PubMedID : 29862293)@late embryogenesis abundant protein, putative, expressed -
8 Sobic.009G006500 integral membrane protein DUF6 containing protein, expressed -
9 Sobic.003G244100 "ABA-Responsive Element (ABRE) -binding factor BZ-1 basic-leucine zipper, maped into a stay green QTL (QSTG12_3"(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under drought(PubMedID : 24916767)@transcription factor, putative, expressed K09060: plant G-box-binding factor
10 Sobic.001G323600 transporter family protein, putative, expressed -
11 Sobic.010G070750 - -
12 Sobic.007G058600 O-methyltransferase, putative, expressed K13066: E2.1.1.68, caffeic acid 3-O-methyltransferase
13 Sobic.005G088700 expressed protein -
14 Sobic.006G142000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
15 Sobic.004G308300 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
16 Sobic.002G141800 expressed protein -
17 Sobic.007G164500 - -
18 Sobic.001G373600 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
19 Sobic.003G024600 CAMK_KIN1/SNF1/Nim1_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
20 Sobic.009G116700 "dehydrin SbDHN1, maps into mapped into a stay green mQTL (QSTG meta1.9)"(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@rab16/17 homolog(PubMedID : 15579713)@dehydrin, putative, expressed -


Gene co-expression network
sample Sobic004G101400 Sobic004G101400 Sobic001G409400 Sobic001G409400 Sobic004G101400--Sobic001G409400 Sobic002G107400 Sobic002G107400 Sobic004G101400--Sobic002G107400 Sobic009G046200 Sobic009G046200 Sobic004G101400--Sobic009G046200 Sobic006G104000 Sobic006G104000 Sobic004G101400--Sobic006G104000 Sobic009G015500 Sobic009G015500 Sobic004G101400--Sobic009G015500 Sobic009G158600 Sobic009G158600 Sobic004G101400--Sobic009G158600 Sobic003G011400 Sobic003G011400 Sobic004G101400--Sobic003G011400 Sobic009G006500 Sobic009G006500 Sobic004G101400--Sobic009G006500 Sobic003G244100 Sobic003G244100 Sobic004G101400--Sobic003G244100 Sobic001G409400--Sobic009G046200 Sobic004G308300 Sobic004G308300 Sobic001G409400--Sobic004G308300 Sobic007G164500 Sobic007G164500 Sobic001G409400--Sobic007G164500 Sobic001G409400--Sobic003G244100 Sobic001G323600 Sobic001G323600 Sobic001G409400--Sobic001G323600 Sobic010G070750 Sobic010G070750 Sobic001G409400--Sobic010G070750 Sobic001G373600 Sobic001G373600 Sobic001G409400--Sobic001G373600 Sobic003G024600 Sobic003G024600 Sobic001G409400--Sobic003G024600 Sobic002G097000 Sobic002G097000 Sobic001G409400--Sobic002G097000 Sobic010G170300 Sobic010G170300 Sobic002G107400--Sobic010G170300 Sobic002G107400--Sobic004G101400 Sobic002G107400--Sobic009G006500 Sobic003G015200 Sobic003G015200 Sobic002G107400--Sobic003G015200 Sobic001G026300 Sobic001G026300 Sobic002G107400--Sobic001G026300 Sobic007G156800 Sobic007G156800 Sobic002G107400--Sobic007G156800 Sobic002G107400--Sobic009G015500 Sobic005G149600 Sobic005G149600 Sobic002G107400--Sobic005G149600 Sobic001G452200 Sobic001G452200 Sobic002G107400--Sobic001G452200 Sobic009G046200--Sobic001G373600 Sobic001G466450 Sobic001G466450 Sobic009G046200--Sobic001G466450 Sobic009G046200--Sobic007G164500 Sobic006G104000--Sobic009G046200 Sobic002G132500 Sobic002G132500 Sobic006G104000--Sobic002G132500 Sobic006G104000--Sobic003G011400 Sobic006G104000--Sobic003G024600 Sobic006G104000--Sobic001G466450 Sobic007G058600 Sobic007G058600 Sobic009G015500--Sobic007G058600 Sobic009G015500--Sobic001G323600 Sobic009G015500--Sobic010G070750 Sobic009G015500--Sobic004G308300 Sobic005G088700 Sobic005G088700 Sobic009G015500--Sobic005G088700 Sobic009G015500--Sobic009G158600 Sobic009G015500--Sobic003G024600 Sobic009G015500--Sobic007G164500 Sobic009G015500--Sobic001G373600 Sobic009G158600--Sobic001G323600 Sobic009G158600--Sobic009G015500 Sobic009G158600--Sobic010G070750 Sobic009G158600--Sobic007G164500 Sobic009G158600--Sobic004G308300 Sobic009G158600--Sobic003G024600 Sobic009G158600--Sobic001G373600 Sobic009G158600--Sobic005G088700 Sobic009G158600--Sobic001G466450 Sobic001G200700 Sobic001G200700 Sobic003G011400--Sobic001G200700 Sobic009G116700 Sobic009G116700 Sobic003G011400--Sobic009G116700 Sobic003G011400--Sobic009G046200 Sobic003G011400--Sobic007G164500 Sobic003G011400--Sobic001G323600 Sobic003G011400--Sobic001G373600 Sobic003G011400--Sobic003G024600 Sobic003G011400--Sobic001G466450 Sobic009G006500--Sobic009G015500 Sobic009G006500--Sobic007G058600 Sobic009G006500--Sobic003G015200 Sobic009G006500--Sobic004G308300 Sobic006G181900 Sobic006G181900 Sobic009G006500--Sobic006G181900 Sobic009G006500--Sobic010G070750 Sobic006G142000 Sobic006G142000 Sobic009G006500--Sobic006G142000 Sobic009G006500--Sobic002G107400 Sobic009G006500--Sobic001G323600 Sobic002G141800 Sobic002G141800 Sobic003G244100--Sobic002G141800 Sobic003G244100--Sobic009G116700 Sobic003G244100--Sobic009G046200 Sobic003G244100--Sobic001G409400 Sobic003G244100--Sobic006G104000 Sobic003G244100--Sobic003G011400 Sobic003G244100--Sobic002G097000 Sobic003G244100--Sobic001G373600 Sobic003G244100--Sobic001G466450
Octagon: transcription factors


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