Gene annotation
Transcriptome id Sobic.006G248600.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6PNR7
Pfam -
Panther DB PTHR33181 PTHR33181:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G43150 : -
RAP-DB (Rice) LOC_Os04g56309.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK23020 , KQK07653
Barley HORVU0Hr1G039080.2 , HORVU0Hr1G039080.1 , HORVU0Hr1G039080.6 , HORVU0Hr1G039080.7 , HORVU0Hr1G039080.4 , HORVU0Hr1G039080.5
Wheat TraesCS2D02G501900 , TraesCS2B02G529500 , TraesCS2A02G501400
Populus -


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cDNA sequences
Sobic.006G248600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G083600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
2 Sobic.002G151200 seed maturation protein LEA 4, putative, expressed -
3 Sobic.006G054400 expressed protein -
4 Sobic.006G269501 - -
5 Sobic.004G243300 expressed protein -
6 Sobic.003G353000 WRKY56, expressed -
7 Sobic.001G109000 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
8 Sobic.008G161601 - -
9 Sobic.009G168800 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@phosphatidylethanolamine-binding protein, putative, expressed K06910: PEBP1, phosphatidylethanolamine-binding protein
10 Sobic.001G241000 late embryogenesis abundant protein D-34, putative, expressed -
11 Sobic.009G115200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
12 Sobic.005G138500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.005G089900 dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
14 Sobic.003G019300 GDSL-like lipase/acylhydrolase, putative, expressed -
15 Sobic.006G142233 - -
16 Sobic.003G302466 - -
17 Sobic.001G492000 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@embryonic protein DC-8, putative, expressed -
18 Sobic.007G172800 ZOS8-13 - C2H2 zinc finger protein, expressed -
19 Sobic.009G227300 "BG3(Ortholog in rice:Xiao et al., 2018)"(PubMedID : 31659926)@purine permease, putative, expressed -
20 Sobic.009G215700 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@late embryogenesis abundant protein, group 3, putative, expressed -


Gene co-expression network
sample Sobic006G248600 Sobic006G248600 Sobic004G083600 Sobic004G083600 Sobic006G248600--Sobic004G083600 Sobic002G151200 Sobic002G151200 Sobic006G248600--Sobic002G151200 Sobic006G054400 Sobic006G054400 Sobic006G248600--Sobic006G054400 Sobic006G269501 Sobic006G269501 Sobic006G248600--Sobic006G269501 Sobic004G243300 Sobic004G243300 Sobic006G248600--Sobic004G243300 Sobic003G353000 Sobic003G353000 Sobic006G248600--Sobic003G353000 Sobic001G109000 Sobic001G109000 Sobic006G248600--Sobic001G109000 Sobic008G161601 Sobic008G161601 Sobic006G248600--Sobic008G161601 Sobic009G168800 Sobic009G168800 Sobic006G248600--Sobic009G168800 Sobic009G115200 Sobic009G115200 Sobic004G083600--Sobic009G115200 Sobic009G191801 Sobic009G191801 Sobic004G083600--Sobic009G191801 Sobic004G195900 Sobic004G195900 Sobic004G083600--Sobic004G195900 Sobic001G241000 Sobic001G241000 Sobic004G083600--Sobic001G241000 Sobic004G111500 Sobic004G111500 Sobic004G083600--Sobic004G111500 Sobic001G088600 Sobic001G088600 Sobic004G083600--Sobic001G088600 Sobic009G227300 Sobic009G227300 Sobic004G083600--Sobic009G227300 Sobic002G111400 Sobic002G111400 Sobic004G083600--Sobic002G111400 Sobic006G093500 Sobic006G093500 Sobic004G083600--Sobic006G093500 Sobic002G151200--Sobic006G269501 Sobic001G492000 Sobic001G492000 Sobic002G151200--Sobic001G492000 Sobic009G215700 Sobic009G215700 Sobic002G151200--Sobic009G215700 Sobic002G151200--Sobic001G109000 Sobic005G138500 Sobic005G138500 Sobic002G151200--Sobic005G138500 Sobic001G354800 Sobic001G354800 Sobic002G151200--Sobic001G354800 Sobic002G151200--Sobic004G243300 Sobic002G383500 Sobic002G383500 Sobic002G151200--Sobic002G383500 Sobic007G004900 Sobic007G004900 Sobic002G151200--Sobic007G004900 Sobic006G054400--Sobic008G161601 Sobic009G231500 Sobic009G231500 Sobic006G054400--Sobic009G231500 Sobic006G132300 Sobic006G132300 Sobic006G054400--Sobic006G132300 Sobic002G370300 Sobic002G370300 Sobic006G054400--Sobic002G370300 Sobic003G101100 Sobic003G101100 Sobic006G054400--Sobic003G101100 Sobic001G203100 Sobic001G203100 Sobic006G054400--Sobic001G203100 Sobic008G087100 Sobic008G087100 Sobic006G054400--Sobic008G087100 Sobic010G044600 Sobic010G044600 Sobic006G054400--Sobic010G044600 Sobic010G237100 Sobic010G237100 Sobic006G054400--Sobic010G237100 Sobic006G269501--Sobic002G151200 Sobic006G269501--Sobic005G138500 Sobic006G269501--Sobic004G243300 Sobic002G143300 Sobic002G143300 Sobic006G269501--Sobic002G143300 Sobic009G171400 Sobic009G171400 Sobic006G269501--Sobic009G171400 Sobic001G396900 Sobic001G396900 Sobic006G269501--Sobic001G396900 Sobic006G050600 Sobic006G050600 Sobic006G269501--Sobic006G050600 Sobic006G269501--Sobic001G354800 Sobic006G269501--Sobic001G492000 Sobic003G194400 Sobic003G194400 Sobic004G243300--Sobic003G194400 Sobic010G101300 Sobic010G101300 Sobic004G243300--Sobic010G101300 Sobic003G292400 Sobic003G292400 Sobic004G243300--Sobic003G292400 Sobic001G200700 Sobic001G200700 Sobic004G243300--Sobic001G200700 Sobic004G243300--Sobic009G171400 Sobic006G114700 Sobic006G114700 Sobic004G243300--Sobic006G114700 Sobic004G047900 Sobic004G047900 Sobic004G243300--Sobic004G047900 Sobic004G243300--Sobic005G138500 Sobic004G243300--Sobic006G269501 Sobic010G216800 Sobic010G216800 Sobic003G353000--Sobic010G216800 Sobic010G274300 Sobic010G274300 Sobic003G353000--Sobic010G274300 Sobic002G211501 Sobic002G211501 Sobic003G353000--Sobic002G211501 Sobic001G166500 Sobic001G166500 Sobic003G353000--Sobic001G166500 Sobic004G105300 Sobic004G105300 Sobic003G353000--Sobic004G105300 Sobic003G302466 Sobic003G302466 Sobic003G353000--Sobic003G302466 Sobic002G291132 Sobic002G291132 Sobic003G353000--Sobic002G291132 Sobic001G259300 Sobic001G259300 Sobic003G353000--Sobic001G259300 Sobic003G353000--Sobic001G203100 Sobic001G109000--Sobic001G492000 Sobic001G109000--Sobic001G354800 Sobic001G109000--Sobic009G215700 Sobic001G109000--Sobic002G151200 Sobic001G109000--Sobic009G168800 Sobic006G104000 Sobic006G104000 Sobic001G109000--Sobic006G104000 Sobic001G307000 Sobic001G307000 Sobic001G109000--Sobic001G307000 Sobic001G109000--Sobic001G200700 Sobic004G142500 Sobic004G142500 Sobic001G109000--Sobic004G142500 Sobic008G161601--Sobic006G132300 Sobic001G413850 Sobic001G413850 Sobic008G161601--Sobic001G413850 Sobic008G186700 Sobic008G186700 Sobic008G161601--Sobic008G186700 Sobic001G381250 Sobic001G381250 Sobic008G161601--Sobic001G381250 Sobic009G168800--Sobic001G354800 Sobic009G168800--Sobic001G109000 Sobic009G168800--Sobic001G492000 Sobic009G168800--Sobic004G142500 Sobic009G168800--Sobic002G151200 Sobic009G168800--Sobic006G269501 Sobic009G168800--Sobic005G138500 Sobic009G168800--Sobic001G307000 Sobic009G168800--Sobic004G047900
Octagon: transcription factors


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