Gene annotation
Transcriptome id Sobic.006G142233.1
Synonym -
Functional annotation -
UniProt A0A1Z5REV5
Pfam -
Panther DB PTHR31852 PTHR31852:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g40650.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G161601 - -
2 Sobic.005G089900 dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
3 Sobic.007G093300 expressed protein -
4 Sobic.006G054400 expressed protein -
5 Sobic.010G049800 strictosidine synthase, putative, expressed -
6 Sobic.010G061700 jp18, putative, expressed -
7 Sobic.008G154801 - -
8 Sobic.006G248600 expressed protein -
9 Sobic.008G070200 trehalose phosphatase, putative, expressed K01087: trehalose 6-phosphate phosphatase
10 Sobic.003G331700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@thaumatin, putative, expressed -
11 Sobic.006G261200 Trihelix Family(PubMedID : 24864043)@GL4(Ortholog in rice:Wu et al. (2017) )(PubMedID : 31659902)@transcription factor, putative, expressed -
12 Sobic.001G369300 cytochrome P450, putative, expressed -
13 Sobic.003G242200 Up-reguralion under drought(PubMedID : 24916767)@protein phosphatase 2C, putative, expressed K14497: protein phosphatase 2C
14 Sobic.006G133000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
15 Sobic.006G064400 desiccation-related protein PCC13-62 precursor, putative, expressed -
16 Sobic.010G180200 transcription factor S-II, central domain containing protein, expressed -
17 Sobic.003G402100 leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed -
18 Sobic.006G132300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@CHIT3 - Chitinase family protein precursor, expressed K01183: chitinase
19 Sobic.007G075351 - -
20 Sobic.004G037300 cycloartenol synthase, putative, expressed -


Gene co-expression network
sample Sobic006G142233 Sobic006G142233 Sobic008G161601 Sobic008G161601 Sobic006G142233--Sobic008G161601 Sobic005G089900 Sobic005G089900 Sobic006G142233--Sobic005G089900 Sobic007G093300 Sobic007G093300 Sobic006G142233--Sobic007G093300 Sobic006G054400 Sobic006G054400 Sobic006G142233--Sobic006G054400 Sobic010G049800 Sobic010G049800 Sobic006G142233--Sobic010G049800 Sobic010G061700 Sobic010G061700 Sobic006G142233--Sobic010G061700 Sobic008G154801 Sobic008G154801 Sobic006G142233--Sobic008G154801 Sobic006G248600 Sobic006G248600 Sobic006G142233--Sobic006G248600 Sobic008G070200 Sobic008G070200 Sobic006G142233--Sobic008G070200 Sobic006G132300 Sobic006G132300 Sobic008G161601--Sobic006G132300 Sobic001G413850 Sobic001G413850 Sobic008G161601--Sobic001G413850 Sobic008G186700 Sobic008G186700 Sobic008G161601--Sobic008G186700 Sobic001G381250 Sobic001G381250 Sobic008G161601--Sobic001G381250 Sobic001G351300 Sobic001G351300 Sobic005G089900--Sobic001G351300 Sobic001G262000 Sobic001G262000 Sobic005G089900--Sobic001G262000 Sobic005G089900--Sobic008G161601 Sobic006G133000 Sobic006G133000 Sobic005G089900--Sobic006G133000 Sobic003G331700 Sobic003G331700 Sobic005G089900--Sobic003G331700 Sobic005G089900--Sobic006G132300 Sobic001G369300 Sobic001G369300 Sobic005G089900--Sobic001G369300 Sobic009G024700 Sobic009G024700 Sobic005G089900--Sobic009G024700 Sobic005G089900--Sobic006G054400 Sobic007G093300--Sobic010G049800 Sobic007G093300--Sobic001G369300 Sobic007G075351 Sobic007G075351 Sobic007G093300--Sobic007G075351 Sobic001G160600 Sobic001G160600 Sobic007G093300--Sobic001G160600 Sobic006G064400 Sobic006G064400 Sobic007G093300--Sobic006G064400 Sobic006G261200 Sobic006G261200 Sobic007G093300--Sobic006G261200 Sobic007G093300--Sobic008G154801 Sobic007G093300--Sobic009G024700 Sobic009G231500 Sobic009G231500 Sobic007G093300--Sobic009G231500 Sobic006G054400--Sobic008G161601 Sobic006G054400--Sobic009G231500 Sobic006G054400--Sobic006G132300 Sobic002G370300 Sobic002G370300 Sobic006G054400--Sobic002G370300 Sobic003G101100 Sobic003G101100 Sobic006G054400--Sobic003G101100 Sobic001G203100 Sobic001G203100 Sobic006G054400--Sobic001G203100 Sobic008G087100 Sobic008G087100 Sobic006G054400--Sobic008G087100 Sobic010G044600 Sobic010G044600 Sobic006G054400--Sobic010G044600 Sobic010G237100 Sobic010G237100 Sobic006G054400--Sobic010G237100 Sobic010G049800--Sobic006G064400 Sobic010G049800--Sobic001G381250 Sobic003G421900 Sobic003G421900 Sobic010G061700--Sobic003G421900 Sobic001G322832 Sobic001G322832 Sobic010G061700--Sobic001G322832 Sobic004G274500 Sobic004G274500 Sobic010G061700--Sobic004G274500 Sobic001G368900 Sobic001G368900 Sobic010G061700--Sobic001G368900 Sobic010G061700--Sobic006G261200 Sobic009G227201 Sobic009G227201 Sobic010G061700--Sobic009G227201 Sobic007G084800 Sobic007G084800 Sobic010G061700--Sobic007G084800 Sobic003G402100 Sobic003G402100 Sobic010G061700--Sobic003G402100 Sobic010G061700--Sobic010G049800 Sobic002G315500 Sobic002G315500 Sobic008G154801--Sobic002G315500 Sobic006G212400 Sobic006G212400 Sobic008G154801--Sobic006G212400 Sobic002G366000 Sobic002G366000 Sobic008G154801--Sobic002G366000 Sobic005G004000 Sobic005G004000 Sobic008G154801--Sobic005G004000 Sobic008G154700 Sobic008G154700 Sobic008G154801--Sobic008G154700 Sobic001G093000 Sobic001G093000 Sobic008G154801--Sobic001G093000 Sobic003G360700 Sobic003G360700 Sobic008G154801--Sobic003G360700 Sobic008G154801--Sobic007G093300 Sobic009G254000 Sobic009G254000 Sobic008G154801--Sobic009G254000 Sobic004G083600 Sobic004G083600 Sobic006G248600--Sobic004G083600 Sobic002G151200 Sobic002G151200 Sobic006G248600--Sobic002G151200 Sobic006G248600--Sobic006G054400 Sobic006G269501 Sobic006G269501 Sobic006G248600--Sobic006G269501 Sobic004G243300 Sobic004G243300 Sobic006G248600--Sobic004G243300 Sobic003G353000 Sobic003G353000 Sobic006G248600--Sobic003G353000 Sobic001G109000 Sobic001G109000 Sobic006G248600--Sobic001G109000 Sobic006G248600--Sobic008G161601 Sobic009G168800 Sobic009G168800 Sobic006G248600--Sobic009G168800 Sobic004G028700 Sobic004G028700 Sobic008G070200--Sobic004G028700 Sobic002G277432 Sobic002G277432 Sobic008G070200--Sobic002G277432 Sobic005G176500 Sobic005G176500 Sobic008G070200--Sobic005G176500 Sobic008G120450 Sobic008G120450 Sobic008G070200--Sobic008G120450 Sobic009G073700 Sobic009G073700 Sobic008G070200--Sobic009G073700 Sobic009G071900 Sobic009G071900 Sobic008G070200--Sobic009G071900 Sobic005G140300 Sobic005G140300 Sobic008G070200--Sobic005G140300 Sobic005G110000 Sobic005G110000 Sobic008G070200--Sobic005G110000 Sobic004G014300 Sobic004G014300 Sobic008G070200--Sobic004G014300
Octagon: transcription factors


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