Gene annotation
Transcriptome id Sobic.006G054400.1
Synonym Sb06g014270
Functional annotation expressed protein
UniProt A0A1B6PKE4
Pfam PF15249
Panther DB PTHR15572 PTHR15572:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G17510 : -
RAP-DB (Rice) LOC_Os04g32250.1 : expressed protein
MaizeGDB (Corn) Zm00025a055911 , Zm00025a011732
Brachypodium PNT60934
Barley HORVU2Hr1G070620.1
Wheat TraesCS2B02G302500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G161601 - -
2 Sobic.009G231500 expressed protein -
3 Sobic.006G132300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@CHIT3 - Chitinase family protein precursor, expressed K01183: chitinase
4 Sobic.002G370300 pectinesterase, putative, expressed K01051: pectinesterase
5 Sobic.003G101100 no apical meristem protein, putative, expressed -
6 Sobic.001G203100 expressed protein -
7 Sobic.008G087100 DNA-binding storekeeper protein-related, putative, expressed -
8 Sobic.010G044600 GDSL-like lipase/acylhydrolase, putative, expressed -
9 Sobic.010G237100 expressed protein -
10 Sobic.007G172800 ZOS8-13 - C2H2 zinc finger protein, expressed -
11 Sobic.001G413850 - -
12 Sobic.003G226000 polygalacturonase, putative, expressed K01184: polygalacturonase
13 Sobic.007G036600 expressed protein -
14 Sobic.006G064400 desiccation-related protein PCC13-62 precursor, putative, expressed -
15 Sobic.005G110000 LTPL151 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.007G029800 LTPL24 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.002G362400 uncharacterized 50.6 kDa protein in the 5region of gyrA and gyrB, putative, expressed -
18 Sobic.010G069700 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
19 Sobic.005G169300 WIP5 - Wound-induced protein precursor, expressed -
20 Sobic.002G274900 harpin-induced protein 1 domain containing protein, expressed -


Gene co-expression network
sample Sobic006G054400 Sobic006G054400 Sobic008G161601 Sobic008G161601 Sobic006G054400--Sobic008G161601 Sobic009G231500 Sobic009G231500 Sobic006G054400--Sobic009G231500 Sobic006G132300 Sobic006G132300 Sobic006G054400--Sobic006G132300 Sobic002G370300 Sobic002G370300 Sobic006G054400--Sobic002G370300 Sobic003G101100 Sobic003G101100 Sobic006G054400--Sobic003G101100 Sobic001G203100 Sobic001G203100 Sobic006G054400--Sobic001G203100 Sobic008G087100 Sobic008G087100 Sobic006G054400--Sobic008G087100 Sobic010G044600 Sobic010G044600 Sobic006G054400--Sobic010G044600 Sobic010G237100 Sobic010G237100 Sobic006G054400--Sobic010G237100 Sobic008G161601--Sobic006G132300 Sobic001G413850 Sobic001G413850 Sobic008G161601--Sobic001G413850 Sobic008G186700 Sobic008G186700 Sobic008G161601--Sobic008G186700 Sobic001G381250 Sobic001G381250 Sobic008G161601--Sobic001G381250 Sobic009G231500--Sobic010G044600 Sobic009G231500--Sobic003G101100 Sobic007G036600 Sobic007G036600 Sobic009G231500--Sobic007G036600 Sobic009G231500--Sobic002G370300 Sobic009G231500--Sobic010G237100 Sobic002G362400 Sobic002G362400 Sobic009G231500--Sobic002G362400 Sobic007G029800 Sobic007G029800 Sobic009G231500--Sobic007G029800 Sobic003G226000 Sobic003G226000 Sobic009G231500--Sobic003G226000 Sobic002G274900 Sobic002G274900 Sobic009G231500--Sobic002G274900 Sobic005G169300 Sobic005G169300 Sobic006G132300--Sobic005G169300 Sobic006G132300--Sobic001G381250 Sobic002G370300--Sobic003G226000 Sobic005G199300 Sobic005G199300 Sobic002G370300--Sobic005G199300 Sobic002G370300--Sobic003G101100 Sobic007G001600 Sobic007G001600 Sobic002G370300--Sobic007G001600 Sobic002G370300--Sobic002G274900 Sobic002G370300--Sobic002G362400 Sobic009G010000 Sobic009G010000 Sobic002G370300--Sobic009G010000 Sobic003G392500 Sobic003G392500 Sobic002G370300--Sobic003G392500 Sobic009G010150 Sobic009G010150 Sobic002G370300--Sobic009G010150 Sobic003G101100--Sobic002G370300 Sobic003G101100--Sobic005G199300 Sobic003G101100--Sobic003G226000 Sobic003G101100--Sobic007G001600 Sobic003G101100--Sobic009G010000 Sobic003G101100--Sobic002G274900 Sobic003G101100--Sobic003G392500 Sobic003G101100--Sobic002G362400 Sobic006G154300 Sobic006G154300 Sobic003G101100--Sobic006G154300 Sobic001G166500 Sobic001G166500 Sobic001G203100--Sobic001G166500 Sobic003G342000 Sobic003G342000 Sobic001G203100--Sobic003G342000 Sobic001G203100--Sobic009G231500 Sobic010G274300 Sobic010G274300 Sobic001G203100--Sobic010G274300 Sobic003G438700 Sobic003G438700 Sobic001G203100--Sobic003G438700 Sobic008G154400 Sobic008G154400 Sobic001G203100--Sobic008G154400 Sobic004G105300 Sobic004G105300 Sobic001G203100--Sobic004G105300 Sobic001G203100--Sobic007G036600 Sobic001G203100--Sobic003G101100 Sobic008G087100--Sobic003G101100 Sobic008G087100--Sobic002G370300 Sobic008G087100--Sobic002G362400 Sobic008G087100--Sobic010G044600 Sobic008G087100--Sobic003G226000 Sobic005G110000 Sobic005G110000 Sobic008G087100--Sobic005G110000 Sobic008G087100--Sobic005G199300 Sobic008G087100--Sobic010G237100 Sobic003G213300 Sobic003G213300 Sobic008G087100--Sobic003G213300 Sobic010G044600--Sobic002G362400 Sobic010G044600--Sobic005G110000 Sobic010G044600--Sobic010G237100 Sobic010G044600--Sobic005G169300 Sobic005G192901 Sobic005G192901 Sobic010G044600--Sobic005G192901 Sobic005G192801 Sobic005G192801 Sobic010G044600--Sobic005G192801 Sobic005G193100 Sobic005G193100 Sobic010G044600--Sobic005G193100 Sobic010G044600--Sobic001G381250 Sobic010G237100--Sobic010G044600 Sobic010G237100--Sobic005G110000 Sobic010G237100--Sobic002G362400 Sobic005G087666 Sobic005G087666 Sobic010G237100--Sobic005G087666 Sobic010G237100--Sobic005G169300 Sobic010G237100--Sobic002G370300 Sobic010G237100--Sobic001G381250
Octagon: transcription factors


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