Gene annotation
Transcriptome id Sobic.003G242200.3,Sobic.003G242200.2,Sobic.003G242200.1
Synonym Sb03g029890, AHG3, ATPP2CA, PP2CA
Functional annotation Up-reguralion under drought (PubMedID : 24916767)
protein phosphatase 2C, putative, expressed
UniProt A0A1B6Q533
Pfam PF00481
Panther DB PTHR13832 PTHR13832:SF326
NCBI CDD KOG0698; Serine/threonine protein phosphatase
KEGG Orthology K14497; protein phosphatase 2C
Gene Ontology GO:0003824; catalytic activity GO:0006470protein dephosphorylation GO:0004722protein serine/threonine phosphatase activity


Orthologs (automatic annotation)
TAIR AT1G72770 : homology to ABI1
RAP-DB (Rice) LOC_Os01g46760.1 : protein phosphatase 2C, putative, expressed
MaizeGDB (Corn) Zm00025a012428 , Zm00025a028197 , Zm00025a036659 , Zm00025a038704 , Zm00025a055673
Brachypodium KQK04770 , KQK17349 , KQK09009 , KQK17350
Barley HORVU7Hr1G008470.2 , HORVU7Hr1G008470.3 , HORVU7Hr1G008520.2 , HORVU7Hr1G008560.2 , HORVU7Hr1G008550.1 , HORVU3Hr1G059170.5 , HORVU3Hr1G059170.2 , HORVU2Hr1G000090.3 , HORVU2Hr1G000090.2 , HORVU2Hr1G000090.1 , HORVU2Hr1G000090.6
Wheat TraesCS4A02G443500 , TraesCS3B02G266200 , TraesCS3B02G266200 , TraesCS7D02G417600 , TraesCS7A02G423900 , TraesCS2D02G000300 , TraesCS3A02G237800 , TraesCS3D02G238000 , TraesCS7B02G326200 , TraesCS2A02G000400 , TraesCS4A02G443400
Populus -


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cDNA sequences
Sobic.003G242200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G156300 similar to Abscisic acid 8'-hydroxylase 2(PubMedID : 29862293)@cytochrome P450, putative, expressed -
2 Sobic.010G136300 osMFT1 MFT-Like1 homologous to Mother of FT and TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
3 Sobic.005G223200 - -
4 Sobic.003G105600 no apical meristem protein, putative, expressed -
5 Sobic.004G313800 - -
6 Sobic.001G326000 expressed protein -
7 Sobic.008G013100 expressed protein -
8 Sobic.006G059900 "ZmIPT2(Ortholog in maize:Weng et al., 2013)"(PubMedID : 31659896)@IPP transferase, putative, expressed K10760: adenylate dimethylallyltransferase (cytokinin synthase)
9 Sobic.003G438700 AWPM-19-like membrane family protein, putative, expressed -
10 Sobic.006G154300 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@KUN1 - Kunitz-type trypsin inhibitor precursor, expressed -
11 Sobic.006G031600 expressed protein -
12 Sobic.010G142300 - -
13 Sobic.009G010150 - -
14 Sobic.002G344900 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
15 Sobic.002G077500 LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.003G392500 cytochrome P450, putative, expressed -
17 Sobic.009G010000 expressed protein -
18 Sobic.009G186400 SSA1 - 2S albumin seed storage family protein precursor, expressed -
19 Sobic.007G001600 LTPL151 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
20 Sobic.005G187100 - -


Gene co-expression network
sample Sobic003G242200 Sobic003G242200 Sobic007G156300 Sobic007G156300 Sobic003G242200--Sobic007G156300 Sobic010G136300 Sobic010G136300 Sobic003G242200--Sobic010G136300 Sobic005G223200 Sobic005G223200 Sobic003G242200--Sobic005G223200 Sobic003G105600 Sobic003G105600 Sobic003G242200--Sobic003G105600 Sobic004G313800 Sobic004G313800 Sobic003G242200--Sobic004G313800 Sobic001G326000 Sobic001G326000 Sobic003G242200--Sobic001G326000 Sobic008G013100 Sobic008G013100 Sobic003G242200--Sobic008G013100 Sobic006G059900 Sobic006G059900 Sobic003G242200--Sobic006G059900 Sobic003G438700 Sobic003G438700 Sobic003G242200--Sobic003G438700 Sobic006G031600 Sobic006G031600 Sobic007G156300--Sobic006G031600 Sobic007G156300--Sobic001G326000 Sobic007G156300--Sobic005G223200 Sobic007G156300--Sobic004G313800 Sobic003G392500 Sobic003G392500 Sobic007G156300--Sobic003G392500 Sobic005G112066 Sobic005G112066 Sobic007G156300--Sobic005G112066 Sobic002G077500 Sobic002G077500 Sobic007G156300--Sobic002G077500 Sobic010G142300 Sobic010G142300 Sobic007G156300--Sobic010G142300 Sobic009G009900 Sobic009G009900 Sobic007G156300--Sobic009G009900 Sobic010G136300--Sobic001G326000 Sobic010G136300--Sobic007G156300 Sobic010G136300--Sobic006G031600 Sobic010G136300--Sobic004G313800 Sobic010G136300--Sobic005G223200 Sobic010G136300--Sobic002G077500 Sobic010G136300--Sobic003G105600 Sobic010G136300--Sobic005G112066 Sobic010G136300--Sobic009G009900 Sobic005G223200--Sobic010G142300 Sobic005G223200--Sobic004G313800 Sobic005G223200--Sobic006G031600 Sobic006G034275 Sobic006G034275 Sobic005G223200--Sobic006G034275 Sobic005G223200--Sobic007G156300 Sobic005G223200--Sobic003G392500 Sobic005G223200--Sobic009G009900 Sobic009G010000 Sobic009G010000 Sobic005G223200--Sobic009G010000 Sobic006G154300 Sobic006G154300 Sobic005G223200--Sobic006G154300 Sobic009G186400 Sobic009G186400 Sobic003G105600--Sobic009G186400 Sobic003G105600--Sobic001G326000 Sobic003G105600--Sobic002G077500 Sobic003G105600--Sobic008G013100 Sobic009G022700 Sobic009G022700 Sobic003G105600--Sobic009G022700 Sobic003G105600--Sobic007G156300 Sobic003G105600--Sobic006G059900 SobicK043500 SobicK043500 Sobic003G105600--SobicK043500 Sobic003G105600--Sobic005G112066 Sobic004G313800--Sobic003G438700 Sobic004G313800--Sobic006G154300 Sobic009G010150 Sobic009G010150 Sobic004G313800--Sobic009G010150 Sobic004G313800--Sobic005G223200 Sobic004G313800--Sobic009G009900 Sobic004G313800--Sobic009G010000 Sobic007G001600 Sobic007G001600 Sobic004G313800--Sobic007G001600 Sobic004G313800--Sobic003G392500 Sobic004G313800--Sobic007G156300 Sobic001G326000--Sobic002G077500 Sobic001G326000--Sobic007G156300 Sobic001G326000--Sobic005G112066 Sobic001G326000--Sobic009G186400 Sobic001G326000--Sobic003G105600 Sobic001G326000--Sobic006G031600 Sobic001G326000--Sobic004G313800 Sobic001G326000--Sobic005G223200 Sobic002G344900 Sobic002G344900 Sobic001G326000--Sobic002G344900 Sobic008G013100--Sobic003G105600 Sobic008G013100--Sobic006G059900 Sobic008G013100--Sobic009G022700 Sobic008G013100--Sobic001G326000 Sobic008G013100--Sobic003G438700 Sobic008G013100--Sobic009G186400 Sobic003G323000 Sobic003G323000 Sobic008G013100--Sobic003G323000 Sobic008G013100--Sobic004G313800 Sobic005G187100 Sobic005G187100 Sobic008G013100--Sobic005G187100 Sobic006G059900--Sobic003G438700 Sobic006G059900--Sobic004G313800 Sobic006G059900--Sobic008G013100 Sobic006G059900--Sobic005G223200 Sobic006G059900--Sobic003G105600 Sobic006G059900--Sobic001G326000 Sobic006G059900--Sobic006G154300 Sobic006G059900--Sobic007G156300 Sobic006G059900--Sobic009G010150 Sobic003G438700--Sobic004G313800 Sobic003G438700--Sobic006G154300 Sobic003G438700--Sobic009G010150 Sobic002G274900 Sobic002G274900 Sobic003G438700--Sobic002G274900 Sobic003G438700--Sobic007G001600 Sobic003G438700--Sobic006G059900 Sobic003G226000 Sobic003G226000 Sobic003G438700--Sobic003G226000 Sobic003G438700--Sobic005G223200 Sobic003G438700--Sobic009G009900
Octagon: transcription factors


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