Gene annotation
Transcriptome id Sobic.003G331700.1
Synonym Sb03g037720, OSM34, ATOSM34
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
thaumatin, putative, expressed
UniProt C5XN52
Pfam PF00314
Panther DB PTHR31048 PTHR31048:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G11650 : osmotin 34
RAP-DB (Rice) LOC_Os12g43490.1 : thaumatin, putative, expressed
MaizeGDB (Corn) Zm00025a027128
Brachypodium KQK13878 , PNT62577 , KQJ86239
Barley HORVU5Hr1G051970.5 , HORVU5Hr1G051970.4 , HORVU5Hr1G051970.7 , HORVU5Hr1G051970.6 , HORVU5Hr1G051970.1 , HORVU5Hr1G051970.3 , HORVU5Hr1G051970.2 , HORVU5Hr1G005180.5 , HORVU5Hr1G005180.4 , HORVU5Hr1G005180.6 , HORVU5Hr1G005180.1 , HORVU5Hr1G005180.3 , HORVU5Hr1G005180.2
Wheat -
Populus -


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cDNA sequences
Sobic.003G331700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G270350 - -
2 Sobic.006G132300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@CHIT3 - Chitinase family protein precursor, expressed K01183: chitinase
3 Sobic.003G242200 Up-reguralion under drought(PubMedID : 24916767)@protein phosphatase 2C, putative, expressed K14497: protein phosphatase 2C
4 Sobic.005G087666 - K17506: PPM1L, protein phosphatase 1L
5 Sobic.007G036600 expressed protein -
6 Sobic.002G362400 uncharacterized 50.6 kDa protein in the 5region of gyrA and gyrB, putative, expressed -
7 Sobic.010G044600 GDSL-like lipase/acylhydrolase, putative, expressed -
8 Sobic.010G237100 expressed protein -
9 Sobic.007G029800 LTPL24 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.003G226000 polygalacturonase, putative, expressed K01184: polygalacturonase
11 Sobic.005G169300 WIP5 - Wound-induced protein precursor, expressed -
12 Sobic.005G110000 LTPL151 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.002G274900 harpin-induced protein 1 domain containing protein, expressed -
14 Sobic.005G193100 "alpha-kafirin locus, highly digestible high-lysine (hdhl) mutant P721Q"(PubMedID : 23948869)@- -
15 Sobic.005G185600 - -
16 Sobic.005G192801 "alpha-kafirin locus, highly digestible high-lysine (hdhl) mutant P721Q"(PubMedID : 23948869) -
17 Sobic.005G192901 "alpha-kafirin locus, highly digestible high-lysine (hdhl) mutant P721Q"(PubMedID : 23948869) -
18 Sobic.001G381250 - -
19 Sobic.001G381250 - -
20 Sobic.001G381250 - -


Gene co-expression network
sample Sobic003G331700 Sobic003G331700 Sobic004G270350 Sobic004G270350 Sobic003G331700--Sobic004G270350 Sobic006G132300 Sobic006G132300 Sobic003G331700--Sobic006G132300 Sobic003G242200 Sobic003G242200 Sobic003G331700--Sobic003G242200 Sobic005G087666 Sobic005G087666 Sobic003G331700--Sobic005G087666 Sobic007G036600 Sobic007G036600 Sobic003G331700--Sobic007G036600 Sobic002G362400 Sobic002G362400 Sobic003G331700--Sobic002G362400 Sobic010G044600 Sobic010G044600 Sobic003G331700--Sobic010G044600 Sobic010G237100 Sobic010G237100 Sobic003G331700--Sobic010G237100 Sobic007G029800 Sobic007G029800 Sobic003G331700--Sobic007G029800 Sobic001G381250 Sobic001G381250 Sobic004G270350--Sobic001G381250 Sobic005G169300 Sobic005G169300 Sobic006G132300--Sobic005G169300 Sobic006G132300--Sobic001G381250 Sobic007G156300 Sobic007G156300 Sobic003G242200--Sobic007G156300 Sobic010G136300 Sobic010G136300 Sobic003G242200--Sobic010G136300 Sobic005G223200 Sobic005G223200 Sobic003G242200--Sobic005G223200 Sobic003G105600 Sobic003G105600 Sobic003G242200--Sobic003G105600 Sobic004G313800 Sobic004G313800 Sobic003G242200--Sobic004G313800 Sobic001G326000 Sobic001G326000 Sobic003G242200--Sobic001G326000 Sobic008G013100 Sobic008G013100 Sobic003G242200--Sobic008G013100 Sobic006G059900 Sobic006G059900 Sobic003G242200--Sobic006G059900 Sobic003G438700 Sobic003G438700 Sobic003G242200--Sobic003G438700 Sobic005G087666--Sobic002G362400 Sobic005G110000 Sobic005G110000 Sobic005G087666--Sobic005G110000 Sobic005G087666--Sobic010G044600 Sobic005G087666--Sobic010G237100 Sobic005G199300 Sobic005G199300 Sobic005G087666--Sobic005G199300 Sobic003G226000 Sobic003G226000 Sobic005G087666--Sobic003G226000 Sobic002G370300 Sobic002G370300 Sobic005G087666--Sobic002G370300 Sobic007G001600 Sobic007G001600 Sobic005G087666--Sobic007G001600 Sobic002G274900 Sobic002G274900 Sobic005G087666--Sobic002G274900 Sobic007G036600--Sobic002G274900 Sobic007G036600--Sobic003G226000 Sobic007G036600--Sobic002G362400 Sobic009G010150 Sobic009G010150 Sobic007G036600--Sobic009G010150 Sobic006G154300 Sobic006G154300 Sobic007G036600--Sobic006G154300 Sobic007G036600--Sobic005G199300 Sobic007G036600--Sobic007G001600 Sobic007G036600--Sobic002G370300 Sobic007G036600--Sobic010G044600 Sobic002G362400--Sobic005G110000 Sobic002G362400--Sobic003G226000 Sobic002G362400--Sobic005G199300 Sobic002G362400--Sobic010G044600 Sobic002G362400--Sobic002G274900 Sobic002G362400--Sobic002G370300 Sobic002G362400--Sobic007G001600 Sobic002G362400--Sobic005G087666 Sobic002G362400--Sobic010G237100 Sobic010G044600--Sobic002G362400 Sobic010G044600--Sobic005G110000 Sobic010G044600--Sobic010G237100 Sobic010G044600--Sobic005G169300 Sobic005G192901 Sobic005G192901 Sobic010G044600--Sobic005G192901 Sobic005G192801 Sobic005G192801 Sobic010G044600--Sobic005G192801 Sobic005G193100 Sobic005G193100 Sobic010G044600--Sobic005G193100 Sobic010G044600--Sobic001G381250 Sobic010G237100--Sobic010G044600 Sobic010G237100--Sobic005G110000 Sobic010G237100--Sobic002G362400 Sobic010G237100--Sobic005G087666 Sobic010G237100--Sobic005G169300 Sobic010G237100--Sobic002G370300 Sobic010G237100--Sobic001G381250 Sobic005G185600 Sobic005G185600 Sobic007G029800--Sobic005G185600 Sobic007G029800--Sobic005G192901 Sobic007G029800--Sobic005G192801 Sobic007G029800--Sobic005G193100 Sobic005G192700 Sobic005G192700 Sobic007G029800--Sobic005G192700 Sobic007G029800--Sobic005G169300 Sobic007G029800--Sobic001G381250
Octagon: transcription factors


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