Gene annotation
Transcriptome id Sobic.006G133000.1
Synonym Sb06g021290
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence (PubMedID : 27586543)
expressed protein
UniProt A0A1B6PLT5
Pfam PF04862
Panther DB PTHR31265 PTHR31265:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G11420 : Protein of unknown function, DUF642
RAP-DB (Rice) LOC_Os04g41740.1 : expressed protein
MaizeGDB (Corn) Zm00025a010850 , Zm00025a010836 , Zm00025a010842 , Zm00025a010843
Brachypodium KQJ84582 , KQK08682
Barley HORVU2Hr1G085370.5 , HORVU2Hr1G085370.4 , HORVU2Hr1G085370.6 , HORVU2Hr1G085370.3 , HORVU2Hr1G085370.2 , HORVU2Hr1G085340.8 , HORVU2Hr1G085340.3 , HORVU2Hr1G085340.4 , HORVU2Hr1G085340.5 , HORVU2Hr1G085340.6 , HORVU2Hr1G085340.7 , HORVU2Hr1G085430.2 , HORVU2Hr1G085430.3 , HORVU2Hr1G085430.1 , HORVU2Hr1G085340.2
Wheat TraesCS2B02G369500 , TraesCS2A02G434700 , TraesCS2D02G349700 , TraesCS2A02G351400 , TraesCS2B02G369300 , TraesCS2A02G351500 , TraesCS2D02G349800 , TraesCS2B02G369800 , TraesCS2D02G349500 , TraesCS2D02G432500 , TraesCS2D02G349200 , TraesCS2A02G351200 , TraesCS2A02G351600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G021132 - -
2 Sobic.009G041100 expressed protein -
3 Sobic.009G169650 - -
4 Sobic.006G151001 - -
5 Sobic.008G161601 - -
6 Sobic.003G331700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@thaumatin, putative, expressed -
7 Sobic.006G096200 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
8 Sobic.008G037000 Ser/Thr protein phosphatase family protein, putative, expressed -
9 Sobic.006G132300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@CHIT3 - Chitinase family protein precursor, expressed K01183: chitinase
10 Sobic.010G237100 expressed protein -
11 Sobic.010G044600 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.008G186700 - -
13 Sobic.005G169300 WIP5 - Wound-induced protein precursor, expressed -
14 Sobic.005G192900 "alpha-kafirin locus, highly digestible high-lysine (hdhl) mutant P721Q"(PubMedID : 23948869)@- -
15 Sobic.005G193260 "alpha-kafirin locus, highly digestible high-lysine (hdhl) mutant P721Q"(PubMedID : 23948869) -
16 Sobic.001G381250 - -
17 Sobic.001G381250 - -
18 Sobic.001G381250 - -
19 Sobic.001G381250 - -
20 Sobic.001G381250 - -


Gene co-expression network
sample Sobic006G133000 Sobic006G133000 Sobic002G021132 Sobic002G021132 Sobic006G133000--Sobic002G021132 Sobic009G041100 Sobic009G041100 Sobic006G133000--Sobic009G041100 Sobic009G169650 Sobic009G169650 Sobic006G133000--Sobic009G169650 Sobic006G151001 Sobic006G151001 Sobic006G133000--Sobic006G151001 Sobic008G161601 Sobic008G161601 Sobic006G133000--Sobic008G161601 Sobic003G331700 Sobic003G331700 Sobic006G133000--Sobic003G331700 Sobic006G096200 Sobic006G096200 Sobic006G133000--Sobic006G096200 Sobic008G037000 Sobic008G037000 Sobic006G133000--Sobic008G037000 Sobic006G132300 Sobic006G132300 Sobic006G133000--Sobic006G132300 Sobic002G021132--Sobic006G096200 Sobic009G231500 Sobic009G231500 Sobic002G021132--Sobic009G231500 Sobic002G021132--Sobic009G041100 Sobic001G166500 Sobic001G166500 Sobic002G021132--Sobic001G166500 Sobic002G021132--Sobic009G169650 Sobic007G075351 Sobic007G075351 Sobic002G021132--Sobic007G075351 Sobic007G036600 Sobic007G036600 Sobic002G021132--Sobic007G036600 Sobic007G029800 Sobic007G029800 Sobic002G021132--Sobic007G029800 Sobic002G021132--Sobic006G132300 Sobic010G237100 Sobic010G237100 Sobic009G041100--Sobic010G237100 Sobic010G044600 Sobic010G044600 Sobic009G041100--Sobic010G044600 Sobic001G381250 Sobic001G381250 Sobic009G041100--Sobic001G381250 Sobic009G169650--Sobic001G381250 Sobic006G151001--Sobic009G041100 Sobic003G376000 Sobic003G376000 Sobic006G151001--Sobic003G376000 Sobic006G151001--Sobic008G037000 Sobic003G062200 Sobic003G062200 Sobic006G151001--Sobic003G062200 Sobic006G151001--Sobic006G096200 Sobic006G151001--Sobic009G169650 Sobic006G244500 Sobic006G244500 Sobic006G151001--Sobic006G244500 Sobic009G009800 Sobic009G009800 Sobic006G151001--Sobic009G009800 Sobic006G151001--Sobic010G044600 Sobic008G161601--Sobic006G132300 Sobic001G413850 Sobic001G413850 Sobic008G161601--Sobic001G413850 Sobic008G186700 Sobic008G186700 Sobic008G161601--Sobic008G186700 Sobic008G161601--Sobic001G381250 Sobic004G270350 Sobic004G270350 Sobic003G331700--Sobic004G270350 Sobic003G331700--Sobic006G132300 Sobic003G242200 Sobic003G242200 Sobic003G331700--Sobic003G242200 Sobic005G087666 Sobic005G087666 Sobic003G331700--Sobic005G087666 Sobic003G331700--Sobic007G036600 Sobic002G362400 Sobic002G362400 Sobic003G331700--Sobic002G362400 Sobic003G331700--Sobic010G044600 Sobic003G331700--Sobic010G237100 Sobic003G331700--Sobic007G029800 Sobic010G136300 Sobic010G136300 Sobic006G096200--Sobic010G136300 Sobic003G438700 Sobic003G438700 Sobic006G096200--Sobic003G438700 Sobic008G013100 Sobic008G013100 Sobic006G096200--Sobic008G013100 Sobic004G313800 Sobic004G313800 Sobic006G096200--Sobic004G313800 Sobic003G105600 Sobic003G105600 Sobic006G096200--Sobic003G105600 Sobic006G154300 Sobic006G154300 Sobic006G096200--Sobic006G154300 Sobic006G059900 Sobic006G059900 Sobic006G096200--Sobic006G059900 Sobic009G010150 Sobic009G010150 Sobic006G096200--Sobic009G010150 Sobic010G031600 Sobic010G031600 Sobic006G096200--Sobic010G031600 Sobic008G037000--Sobic010G136300 Sobic008G037000--Sobic003G376000 Sobic008G037000--Sobic010G031600 Sobic001G277800 Sobic001G277800 Sobic008G037000--Sobic001G277800 Sobic008G037000--Sobic009G009800 Sobic008G037000--Sobic009G041100 Sobic008G037000--Sobic006G096200 Sobic007G156300 Sobic007G156300 Sobic008G037000--Sobic007G156300 Sobic006G031600 Sobic006G031600 Sobic008G037000--Sobic006G031600 Sobic005G169300 Sobic005G169300 Sobic006G132300--Sobic005G169300 Sobic006G132300--Sobic001G381250
Octagon: transcription factors


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