Gene annotation
Transcriptome id Sobic.003G353000.2,Sobic.003G353000.3,Sobic.003G353000.1
Synonym WRKY49, ATWRKY49, Sb03g039550
Functional annotation WRKY56, expressed
UniProt A0A1W0W0D9 , A0A1W0W0F2 , A0A1W0W0E7
Pfam PF03106
Panther DB PTHR31221 PTHR31221:SF38
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT5G43290 : WRKY DNA-binding protein 49
RAP-DB (Rice) LOC_Os01g62514.1 : WRKY56, expressed
MaizeGDB (Corn) Zm00025a026889 , Zm00025a039676 , Zm00025a039677
Brachypodium KQK00570 , KQK10532 , KQK10533
Barley -
Wheat TraesCS3D02G354700 , TraesCS3A02G360900 , TraesCS3B02G393300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G216800 expressed protein -
2 Sobic.010G274300 ZOS6-11 - C2H2 zinc finger protein, expressed -
3 Sobic.002G211501 - -
4 Sobic.001G166500 gibberellin 20 oxidase 2, putative, expressed -
5 Sobic.004G105300 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.003G302466 - -
7 Sobic.002G291132 - -
8 Sobic.001G259300 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed -
9 Sobic.001G203100 expressed protein -
10 Sobic.007G172800 ZOS8-13 - C2H2 zinc finger protein, expressed -
11 Sobic.008G154400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
12 Sobic.001G059800 cupin domain containing protein, expressed -
13 Sobic.009G061800 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
14 Sobic.005G188000 no apical meristem protein, putative, expressed -
15 Sobic.003G350900 homeobox domain containing protein, expressed -
16 Sobic.003G438700 AWPM-19-like membrane family protein, putative, expressed -
17 Sobic.009G022700 - -
18 Sobic.006G059900 "ZmIPT2(Ortholog in maize:Weng et al., 2013)"(PubMedID : 31659896)@IPP transferase, putative, expressed K10760: adenylate dimethylallyltransferase (cytokinin synthase)
19 Sobic.002G088000 cytokinin-N-glucosyltransferase 1, putative, expressed -
20 Sobic.003G105600 no apical meristem protein, putative, expressed -


Gene co-expression network
sample Sobic003G353000 Sobic003G353000 Sobic010G216800 Sobic010G216800 Sobic003G353000--Sobic010G216800 Sobic010G274300 Sobic010G274300 Sobic003G353000--Sobic010G274300 Sobic002G211501 Sobic002G211501 Sobic003G353000--Sobic002G211501 Sobic001G166500 Sobic001G166500 Sobic003G353000--Sobic001G166500 Sobic004G105300 Sobic004G105300 Sobic003G353000--Sobic004G105300 Sobic003G302466 Sobic003G302466 Sobic003G353000--Sobic003G302466 Sobic002G291132 Sobic002G291132 Sobic003G353000--Sobic002G291132 Sobic001G259300 Sobic001G259300 Sobic003G353000--Sobic001G259300 Sobic001G203100 Sobic001G203100 Sobic003G353000--Sobic001G203100 Sobic010G216800--Sobic002G211501 Sobic010G216800--Sobic010G274300 Sobic010G216800--Sobic002G291132 Sobic010G010600 Sobic010G010600 Sobic010G216800--Sobic010G010600 Sobic009G061800 Sobic009G061800 Sobic010G216800--Sobic009G061800 Sobic009G086800 Sobic009G086800 Sobic010G216800--Sobic009G086800 Sobic002G088000 Sobic002G088000 Sobic010G216800--Sobic002G088000 Sobic003G350900 Sobic003G350900 Sobic010G216800--Sobic003G350900 Sobic010G216800--Sobic001G259300 Sobic010G274300--Sobic010G216800 Sobic010G274300--Sobic002G211501 Sobic010G274300--Sobic004G105300 Sobic010G274300--Sobic001G166500 Sobic010G274300--Sobic002G291132 Sobic007G172800 Sobic007G172800 Sobic010G274300--Sobic007G172800 Sobic010G274300--Sobic003G302466 Sobic010G274300--Sobic001G203100 Sobic001G059800 Sobic001G059800 Sobic010G274300--Sobic001G059800 Sobic002G211501--Sobic002G291132 Sobic002G211501--Sobic010G216800 Sobic002G211501--Sobic010G274300 Sobic002G211501--Sobic009G086800 Sobic001G234000 Sobic001G234000 Sobic002G211501--Sobic001G234000 Sobic002G211501--Sobic009G061800 Sobic002G211501--Sobic001G259300 Sobic001G530400 Sobic001G530400 Sobic002G211501--Sobic001G530400 Sobic006G036201 Sobic006G036201 Sobic002G211501--Sobic006G036201 Sobic003G438700 Sobic003G438700 Sobic001G166500--Sobic003G438700 Sobic007G036600 Sobic007G036600 Sobic001G166500--Sobic007G036600 Sobic006G154300 Sobic006G154300 Sobic001G166500--Sobic006G154300 Sobic006G059900 Sobic006G059900 Sobic001G166500--Sobic006G059900 Sobic004G313800 Sobic004G313800 Sobic001G166500--Sobic004G313800 Sobic009G231500 Sobic009G231500 Sobic001G166500--Sobic009G231500 Sobic009G010150 Sobic009G010150 Sobic001G166500--Sobic009G010150 Sobic002G274900 Sobic002G274900 Sobic001G166500--Sobic002G274900 Sobic008G013100 Sobic008G013100 Sobic001G166500--Sobic008G013100 Sobic004G105300--Sobic010G274300 Sobic004G105300--Sobic001G166500 Sobic004G105300--Sobic003G302466 Sobic004G105300--Sobic001G203100 Sobic004G105300--Sobic007G172800 Sobic004G105300--Sobic002G211501 Sobic004G068000 Sobic004G068000 Sobic004G105300--Sobic004G068000 Sobic004G105300--Sobic010G216800 Sobic004G105300--Sobic002G291132 Sobic003G302466--Sobic010G274300 Sobic003G302466--Sobic004G105300 Sobic003G302466--Sobic002G211501 Sobic003G302466--Sobic001G059800 Sobic003G302466--Sobic007G172800 Sobic002G059100 Sobic002G059100 Sobic003G302466--Sobic002G059100 Sobic003G302466--Sobic010G216800 Sobic003G302466--Sobic001G203100 Sobic003G302466--Sobic004G068000 Sobic002G291132--Sobic002G211501 Sobic002G291132--Sobic009G061800 Sobic002G291132--Sobic009G086800 Sobic002G291132--Sobic001G530400 Sobic002G291132--Sobic001G259300 Sobic002G291132--Sobic006G036201 Sobic002G291132--Sobic010G216800 Sobic002G291132--Sobic003G350900 Sobic005G188000 Sobic005G188000 Sobic002G291132--Sobic005G188000 Sobic003G323000 Sobic003G323000 Sobic001G259300--Sobic003G323000 Sobic001G259300--Sobic003G350900 Sobic001G259300--Sobic005G188000 Sobic001G259300--Sobic009G061800 Sobic001G259300--Sobic008G013100 Sobic003G105600 Sobic003G105600 Sobic001G259300--Sobic003G105600 Sobic009G022700 Sobic009G022700 Sobic001G259300--Sobic009G022700 Sobic009G186400 Sobic009G186400 Sobic001G259300--Sobic009G186400 Sobic008G064000 Sobic008G064000 Sobic001G259300--Sobic008G064000 Sobic001G203100--Sobic001G166500 Sobic003G342000 Sobic003G342000 Sobic001G203100--Sobic003G342000 Sobic001G203100--Sobic009G231500 Sobic001G203100--Sobic010G274300 Sobic001G203100--Sobic003G438700 Sobic008G154400 Sobic008G154400 Sobic001G203100--Sobic008G154400 Sobic001G203100--Sobic004G105300 Sobic001G203100--Sobic007G036600 Sobic003G101100 Sobic003G101100 Sobic001G203100--Sobic003G101100
Octagon: transcription factors


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