Gene annotation
Transcriptome id Sobic.010G274300.1
Synonym Sb10g030820
Functional annotation ZOS6-11 - C2H2 zinc finger protein, expressed
UniProt A0A1W0VV54
Pfam PF13912
Panther DB PTHR26374 PTHR26374:SF181
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G35280 : C2H2-like zinc finger protein
RAP-DB (Rice) LOC_Os06g51140.1 : ZOS6-11 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a021387 , Zm00025a039697
Brachypodium KQK14433 , KQK16661 , PNT67863 , KQK15405
Barley -
Wheat TraesCS7A02G548800
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G216800 expressed protein -
2 Sobic.002G211501 - -
3 Sobic.004G105300 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.001G166500 gibberellin 20 oxidase 2, putative, expressed -
5 Sobic.002G291132 - -
6 Sobic.007G172800 ZOS8-13 - C2H2 zinc finger protein, expressed -
7 Sobic.003G302466 - -
8 Sobic.001G203100 expressed protein -
9 Sobic.001G059800 cupin domain containing protein, expressed -
10 Sobic.001G259300 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed -
11 Sobic.009G061800 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
12 Sobic.001G530400 expressed protein -
13 Sobic.003G350900 homeobox domain containing protein, expressed -
14 Sobic.008G154400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
15 Sobic.008G013100 expressed protein -
16 Sobic.001G234000 expressed protein -
17 Sobic.006G059900 "ZmIPT2(Ortholog in maize:Weng et al., 2013)"(PubMedID : 31659896)@IPP transferase, putative, expressed K10760: adenylate dimethylallyltransferase (cytokinin synthase)
18 Sobic.006G036201 - -
19 Sobic.004G068000 expressed protein -
20 Sobic.005G003001 - -


Gene co-expression network
sample Sobic010G274300 Sobic010G274300 Sobic010G216800 Sobic010G216800 Sobic010G274300--Sobic010G216800 Sobic002G211501 Sobic002G211501 Sobic010G274300--Sobic002G211501 Sobic004G105300 Sobic004G105300 Sobic010G274300--Sobic004G105300 Sobic001G166500 Sobic001G166500 Sobic010G274300--Sobic001G166500 Sobic002G291132 Sobic002G291132 Sobic010G274300--Sobic002G291132 Sobic007G172800 Sobic007G172800 Sobic010G274300--Sobic007G172800 Sobic003G302466 Sobic003G302466 Sobic010G274300--Sobic003G302466 Sobic001G203100 Sobic001G203100 Sobic010G274300--Sobic001G203100 Sobic001G059800 Sobic001G059800 Sobic010G274300--Sobic001G059800 Sobic010G216800--Sobic002G211501 Sobic010G216800--Sobic010G274300 Sobic010G216800--Sobic002G291132 Sobic010G010600 Sobic010G010600 Sobic010G216800--Sobic010G010600 Sobic009G061800 Sobic009G061800 Sobic010G216800--Sobic009G061800 Sobic009G086800 Sobic009G086800 Sobic010G216800--Sobic009G086800 Sobic002G088000 Sobic002G088000 Sobic010G216800--Sobic002G088000 Sobic003G350900 Sobic003G350900 Sobic010G216800--Sobic003G350900 Sobic001G259300 Sobic001G259300 Sobic010G216800--Sobic001G259300 Sobic002G211501--Sobic002G291132 Sobic002G211501--Sobic010G216800 Sobic002G211501--Sobic010G274300 Sobic002G211501--Sobic009G086800 Sobic001G234000 Sobic001G234000 Sobic002G211501--Sobic001G234000 Sobic002G211501--Sobic009G061800 Sobic002G211501--Sobic001G259300 Sobic001G530400 Sobic001G530400 Sobic002G211501--Sobic001G530400 Sobic006G036201 Sobic006G036201 Sobic002G211501--Sobic006G036201 Sobic004G105300--Sobic010G274300 Sobic004G105300--Sobic001G166500 Sobic004G105300--Sobic003G302466 Sobic004G105300--Sobic001G203100 Sobic004G105300--Sobic007G172800 Sobic004G105300--Sobic002G211501 Sobic004G068000 Sobic004G068000 Sobic004G105300--Sobic004G068000 Sobic004G105300--Sobic010G216800 Sobic004G105300--Sobic002G291132 Sobic003G438700 Sobic003G438700 Sobic001G166500--Sobic003G438700 Sobic007G036600 Sobic007G036600 Sobic001G166500--Sobic007G036600 Sobic006G154300 Sobic006G154300 Sobic001G166500--Sobic006G154300 Sobic006G059900 Sobic006G059900 Sobic001G166500--Sobic006G059900 Sobic004G313800 Sobic004G313800 Sobic001G166500--Sobic004G313800 Sobic009G231500 Sobic009G231500 Sobic001G166500--Sobic009G231500 Sobic009G010150 Sobic009G010150 Sobic001G166500--Sobic009G010150 Sobic002G274900 Sobic002G274900 Sobic001G166500--Sobic002G274900 Sobic008G013100 Sobic008G013100 Sobic001G166500--Sobic008G013100 Sobic002G291132--Sobic002G211501 Sobic002G291132--Sobic009G061800 Sobic002G291132--Sobic009G086800 Sobic002G291132--Sobic001G530400 Sobic002G291132--Sobic001G259300 Sobic002G291132--Sobic006G036201 Sobic002G291132--Sobic010G216800 Sobic002G291132--Sobic003G350900 Sobic005G188000 Sobic005G188000 Sobic002G291132--Sobic005G188000 Sobic007G172800--Sobic010G274300 Sobic007G172800--Sobic001G166500 Sobic007G172800--Sobic004G105300 Sobic007G172800--Sobic001G203100 Sobic007G172800--Sobic006G059900 Sobic007G172800--Sobic010G216800 Sobic007G172800--Sobic003G438700 Sobic007G172800--Sobic009G231500 Sobic007G172800--Sobic007G036600 Sobic003G302466--Sobic010G274300 Sobic003G302466--Sobic004G105300 Sobic003G302466--Sobic002G211501 Sobic003G302466--Sobic001G059800 Sobic003G302466--Sobic007G172800 Sobic002G059100 Sobic002G059100 Sobic003G302466--Sobic002G059100 Sobic003G302466--Sobic010G216800 Sobic003G302466--Sobic001G203100 Sobic003G302466--Sobic004G068000 Sobic001G203100--Sobic001G166500 Sobic003G342000 Sobic003G342000 Sobic001G203100--Sobic003G342000 Sobic001G203100--Sobic009G231500 Sobic001G203100--Sobic010G274300 Sobic001G203100--Sobic003G438700 Sobic008G154400 Sobic008G154400 Sobic001G203100--Sobic008G154400 Sobic001G203100--Sobic004G105300 Sobic001G203100--Sobic007G036600 Sobic003G101100 Sobic003G101100 Sobic001G203100--Sobic003G101100 Sobic001G297300 Sobic001G297300 Sobic001G059800--Sobic001G297300 Sobic001G059800--Sobic002G059100 Sobic001G059800--Sobic002G211501 Sobic001G059800--Sobic010G216800 Sobic001G059800--Sobic010G010600 Sobic001G059800--Sobic010G274300 Sobic001G059800--Sobic001G234000 Sobic007G123000 Sobic007G123000 Sobic001G059800--Sobic007G123000 Sobic007G209700 Sobic007G209700 Sobic001G059800--Sobic007G209700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.