Gene annotation
Transcriptome id Sobic.001G166500.1
Synonym Sb01g014560
Functional annotation gibberellin 20 oxidase 2, putative, expressed
UniProt A0A1B6QJC4
Pfam PF03171 PF14226
Panther DB PTHR10209 PTHR10209:SF98
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT3G19010 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os03g42130.1 : gibberellin 20 oxidase 2, putative, expressed
MaizeGDB (Corn) Zm00025a007402 , Zm00025a017303
Brachypodium -
Barley HORVU4Hr1G013840.2 , HORVU4Hr1G013840.3 , HORVU4Hr1G013840.1 , HORVU4Hr1G013840.4 , HORVU4Hr1G013840.5
Wheat TraesCS4D02G079900 , TraesCS4B02G081200 , TraesCS4B02G328300 , TraesCS4A02G234100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G438700 AWPM-19-like membrane family protein, putative, expressed -
2 Sobic.007G036600 expressed protein -
3 Sobic.006G154300 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@KUN1 - Kunitz-type trypsin inhibitor precursor, expressed -
4 Sobic.006G059900 "ZmIPT2(Ortholog in maize:Weng et al., 2013)"(PubMedID : 31659896)@IPP transferase, putative, expressed K10760: adenylate dimethylallyltransferase (cytokinin synthase)
5 Sobic.004G313800 - -
6 Sobic.009G231500 expressed protein -
7 Sobic.009G010150 - -
8 Sobic.002G274900 harpin-induced protein 1 domain containing protein, expressed -
9 Sobic.008G013100 expressed protein -
10 Sobic.003G226000 polygalacturonase, putative, expressed K01184: polygalacturonase
11 Sobic.007G001600 LTPL151 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.006G096200 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
13 Sobic.005G199300 expressed protein -
14 Sobic.003G101100 no apical meristem protein, putative, expressed -
15 Sobic.002G370300 pectinesterase, putative, expressed K01051: pectinesterase
16 Sobic.003G105600 no apical meristem protein, putative, expressed -
17 Sobic.009G022700 - -
18 Sobic.001G259300 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed -
19 Sobic.001G203100 expressed protein -
20 Sobic.005G223200 - -


Gene co-expression network
sample Sobic001G166500 Sobic001G166500 Sobic003G438700 Sobic003G438700 Sobic001G166500--Sobic003G438700 Sobic007G036600 Sobic007G036600 Sobic001G166500--Sobic007G036600 Sobic006G154300 Sobic006G154300 Sobic001G166500--Sobic006G154300 Sobic006G059900 Sobic006G059900 Sobic001G166500--Sobic006G059900 Sobic004G313800 Sobic004G313800 Sobic001G166500--Sobic004G313800 Sobic009G231500 Sobic009G231500 Sobic001G166500--Sobic009G231500 Sobic009G010150 Sobic009G010150 Sobic001G166500--Sobic009G010150 Sobic002G274900 Sobic002G274900 Sobic001G166500--Sobic002G274900 Sobic008G013100 Sobic008G013100 Sobic001G166500--Sobic008G013100 Sobic003G438700--Sobic004G313800 Sobic003G438700--Sobic006G154300 Sobic003G438700--Sobic009G010150 Sobic003G438700--Sobic002G274900 Sobic007G001600 Sobic007G001600 Sobic003G438700--Sobic007G001600 Sobic003G438700--Sobic006G059900 Sobic003G226000 Sobic003G226000 Sobic003G438700--Sobic003G226000 Sobic005G223200 Sobic005G223200 Sobic003G438700--Sobic005G223200 Sobic009G009900 Sobic009G009900 Sobic003G438700--Sobic009G009900 Sobic007G036600--Sobic002G274900 Sobic007G036600--Sobic003G226000 Sobic002G362400 Sobic002G362400 Sobic007G036600--Sobic002G362400 Sobic007G036600--Sobic009G010150 Sobic007G036600--Sobic006G154300 Sobic005G199300 Sobic005G199300 Sobic007G036600--Sobic005G199300 Sobic007G036600--Sobic007G001600 Sobic002G370300 Sobic002G370300 Sobic007G036600--Sobic002G370300 Sobic010G044600 Sobic010G044600 Sobic007G036600--Sobic010G044600 Sobic006G154300--Sobic009G010150 Sobic006G154300--Sobic002G274900 Sobic006G154300--Sobic007G001600 Sobic006G154300--Sobic004G313800 Sobic006G154300--Sobic003G226000 Sobic006G154300--Sobic003G438700 Sobic006G154300--Sobic005G199300 Sobic009G010000 Sobic009G010000 Sobic006G154300--Sobic009G010000 Sobic006G154300--Sobic009G009900 Sobic006G059900--Sobic003G438700 Sobic006G059900--Sobic004G313800 Sobic006G059900--Sobic008G013100 Sobic006G059900--Sobic005G223200 Sobic003G105600 Sobic003G105600 Sobic006G059900--Sobic003G105600 Sobic001G326000 Sobic001G326000 Sobic006G059900--Sobic001G326000 Sobic006G059900--Sobic006G154300 Sobic007G156300 Sobic007G156300 Sobic006G059900--Sobic007G156300 Sobic006G059900--Sobic009G010150 Sobic004G313800--Sobic003G438700 Sobic004G313800--Sobic006G154300 Sobic004G313800--Sobic009G010150 Sobic004G313800--Sobic005G223200 Sobic004G313800--Sobic009G009900 Sobic004G313800--Sobic009G010000 Sobic004G313800--Sobic007G001600 Sobic003G392500 Sobic003G392500 Sobic004G313800--Sobic003G392500 Sobic004G313800--Sobic007G156300 Sobic009G231500--Sobic010G044600 Sobic003G101100 Sobic003G101100 Sobic009G231500--Sobic003G101100 Sobic009G231500--Sobic007G036600 Sobic009G231500--Sobic002G370300 Sobic010G237100 Sobic010G237100 Sobic009G231500--Sobic010G237100 Sobic009G231500--Sobic002G362400 Sobic007G029800 Sobic007G029800 Sobic009G231500--Sobic007G029800 Sobic009G231500--Sobic003G226000 Sobic009G231500--Sobic002G274900 Sobic009G010150--Sobic006G154300 Sobic009G010150--Sobic002G274900 Sobic009G010150--Sobic007G001600 Sobic009G010150--Sobic003G226000 Sobic009G010150--Sobic005G199300 Sobic009G010150--Sobic009G010000 Sobic009G010150--Sobic004G313800 Sobic009G010150--Sobic007G036600 Sobic009G010150--Sobic003G438700 Sobic002G274900--Sobic003G226000 Sobic002G274900--Sobic007G001600 Sobic002G274900--Sobic009G010150 Sobic002G274900--Sobic005G199300 Sobic002G274900--Sobic006G154300 Sobic002G274900--Sobic002G362400 Sobic002G274900--Sobic002G370300 Sobic002G274900--Sobic009G010000 Sobic002G274900--Sobic007G036600 Sobic008G013100--Sobic003G105600 Sobic008G013100--Sobic006G059900 Sobic009G022700 Sobic009G022700 Sobic008G013100--Sobic009G022700 Sobic008G013100--Sobic001G326000 Sobic008G013100--Sobic003G438700 Sobic009G186400 Sobic009G186400 Sobic008G013100--Sobic009G186400 Sobic003G323000 Sobic003G323000 Sobic008G013100--Sobic003G323000 Sobic008G013100--Sobic004G313800 Sobic005G187100 Sobic005G187100 Sobic008G013100--Sobic005G187100
Octagon: transcription factors


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