Gene annotation
Transcriptome id Sobic.009G115200.1
Synonym Sb09g018250
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
harpin-induced protein 1 domain containing protein, expressed
UniProt A0A1Z5R2A3
Pfam -
Panther DB PTHR31415 PTHR31415:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G01410 : Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
RAP-DB (Rice) LOC_Os05g30490.1 : harpin-induced protein 1 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a043340
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G115200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G191801 - -
2 Sobic.004G083600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
3 Sobic.006G121700 expressed protein -
4 Sobic.001G088600 universal stress protein domain containing protein, putative, expressed -
5 Sobic.001G243666 - -
6 Sobic.002G111400 heavy metal-associated domain containing protein, expressed -
7 Sobic.004G195900 late embryogenesis abundant protein D-34, putative, expressed -
8 Sobic.009G227300 "BG3(Ortholog in rice:Xiao et al., 2018)"(PubMedID : 31659926)@purine permease, putative, expressed -
9 Sobic.004G190200 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
10 Sobic.009G209400 ubiquinone oxidoreductase, putative, expressed K03940: NADH dehydrogenase (ubiquinone) Fe-S protein 7
11 Sobic.001G241000 late embryogenesis abundant protein D-34, putative, expressed -
12 Sobic.010G164100 aquaporin protein, putative, expressed K09874: aquaporin NIP
13 Sobic.007G075301 - -
14 Sobic.006G093500 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
15 Sobic.002G317500 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
16 Sobic.001G534900 - -
17 Sobic.004G294500 expansin precursor, putative, expressed -
18 Sobic.003G302466 - -
19 Sobic.001G324700 cysteine proteinase inhibitor 8 precursor, putative, expressed -
20 Sobic.007G172800 ZOS8-13 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic009G115200 Sobic009G115200 Sobic009G191801 Sobic009G191801 Sobic009G115200--Sobic009G191801 Sobic004G083600 Sobic004G083600 Sobic009G115200--Sobic004G083600 Sobic006G121700 Sobic006G121700 Sobic009G115200--Sobic006G121700 Sobic001G088600 Sobic001G088600 Sobic009G115200--Sobic001G088600 Sobic001G243666 Sobic001G243666 Sobic009G115200--Sobic001G243666 Sobic002G111400 Sobic002G111400 Sobic009G115200--Sobic002G111400 Sobic004G195900 Sobic004G195900 Sobic009G115200--Sobic004G195900 Sobic009G227300 Sobic009G227300 Sobic009G115200--Sobic009G227300 Sobic004G190200 Sobic004G190200 Sobic009G115200--Sobic004G190200 Sobic009G191801--Sobic009G115200 Sobic009G191801--Sobic006G121700 Sobic009G191801--Sobic001G088600 Sobic009G191801--Sobic001G243666 Sobic009G191801--Sobic002G111400 Sobic009G191801--Sobic004G190200 Sobic009G209400 Sobic009G209400 Sobic009G191801--Sobic009G209400 Sobic010G164100 Sobic010G164100 Sobic009G191801--Sobic010G164100 Sobic002G302300 Sobic002G302300 Sobic009G191801--Sobic002G302300 Sobic004G083600--Sobic009G115200 Sobic004G083600--Sobic009G191801 Sobic004G083600--Sobic004G195900 Sobic001G241000 Sobic001G241000 Sobic004G083600--Sobic001G241000 Sobic004G111500 Sobic004G111500 Sobic004G083600--Sobic004G111500 Sobic004G083600--Sobic001G088600 Sobic004G083600--Sobic009G227300 Sobic004G083600--Sobic002G111400 Sobic006G093500 Sobic006G093500 Sobic004G083600--Sobic006G093500 Sobic006G121700--Sobic001G243666 Sobic006G121700--Sobic004G190200 Sobic006G121700--Sobic009G191801 Sobic006G121700--Sobic010G164100 Sobic007G075301 Sobic007G075301 Sobic006G121700--Sobic007G075301 Sobic006G121700--Sobic001G088600 Sobic001G534900 Sobic001G534900 Sobic006G121700--Sobic001G534900 Sobic004G294500 Sobic004G294500 Sobic006G121700--Sobic004G294500 Sobic006G121700--Sobic009G115200 Sobic001G088600--Sobic002G111400 Sobic001G088600--Sobic009G209400 Sobic001G088600--Sobic002G302300 Sobic001G088600--Sobic009G191801 Sobic007G075250 Sobic007G075250 Sobic001G088600--Sobic007G075250 Sobic002G317500 Sobic002G317500 Sobic001G088600--Sobic002G317500 Sobic001G088600--Sobic006G121700 Sobic001G088600--Sobic001G243666 Sobic010G106601 Sobic010G106601 Sobic001G088600--Sobic010G106601 Sobic001G243666--Sobic006G121700 Sobic001G243666--Sobic009G191801 Sobic001G243666--Sobic004G190200 Sobic001G243666--Sobic010G164100 Sobic001G243666--Sobic001G088600 Sobic001G243666--Sobic007G075301 Sobic001G243666--Sobic001G534900 Sobic001G243666--Sobic002G111400 Sobic001G243666--Sobic009G115200 Sobic002G111400--Sobic001G088600 Sobic002G111400--Sobic009G209400 Sobic002G111400--Sobic002G317500 Sobic002G111400--Sobic002G302300 Sobic002G111400--Sobic007G075250 Sobic002G111400--Sobic009G191801 Sobic002G111400--Sobic010G106601 Sobic002G111400--Sobic006G121700 Sobic001G017500 Sobic001G017500 Sobic002G111400--Sobic001G017500 Sobic004G195900--Sobic004G111500 Sobic004G092700 Sobic004G092700 Sobic004G195900--Sobic004G092700 Sobic001G091000 Sobic001G091000 Sobic004G195900--Sobic001G091000 Sobic004G195900--Sobic009G115200 Sobic004G195900--Sobic001G241000 Sobic001G311200 Sobic001G311200 Sobic004G195900--Sobic001G311200 Sobic004G195900--Sobic004G083600 Sobic004G195900--Sobic002G317500 Sobic004G195900--Sobic009G209400 Sobic009G227300--Sobic009G115200 Sobic009G227300--Sobic001G241000 Sobic009G227300--Sobic004G083600 Sobic009G227300--Sobic009G191801 Sobic009G227300--Sobic004G195900 Sobic010G069700 Sobic010G069700 Sobic009G227300--Sobic010G069700 Sobic001G203100 Sobic001G203100 Sobic009G227300--Sobic001G203100 Sobic002G282800 Sobic002G282800 Sobic009G227300--Sobic002G282800 Sobic007G172800 Sobic007G172800 Sobic009G227300--Sobic007G172800 Sobic004G190200--Sobic006G121700 Sobic004G190200--Sobic001G243666 Sobic009G253800 Sobic009G253800 Sobic004G190200--Sobic009G253800 Sobic004G190200--Sobic004G294500 Sobic004G190200--Sobic010G164100 Sobic004G190200--Sobic009G191801 Sobic002G141450 Sobic002G141450 Sobic004G190200--Sobic002G141450 Sobic004G190200--Sobic007G075301 Sobic001G518700 Sobic001G518700 Sobic004G190200--Sobic001G518700
Octagon: transcription factors


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