Gene annotation
Transcriptome id Sobic.010G164100.1
Synonym ATNLM2, NIP1, 2, NLM2
Functional annotation aquaporin protein, putative, expressed
UniProt A0A194YJN0
Pfam PF00230
Panther DB PTHR19139 PTHR19139:SF183
NCBI CDD KOG0223; Aquaporin (major intrinsic protein family)
KEGG Orthology K09874; aquaporin NIP
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT4G18910 : NOD26-like intrinsic protein 1;2
RAP-DB (Rice) LOC_Os06g35930.1 : aquaporin protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK18035 , KQJ94164
Barley HORVU7Hr1G088900.1 , HORVU7Hr1G043590.7 , HORVU7Hr1G043590.4 , HORVU7Hr1G043590.5 , HORVU7Hr1G043590.2 , HORVU7Hr1G043590.1 , HORVU7Hr1G043590.8 , HORVU7Hr1G043600.2 , HORVU7Hr1G043600.3 , HORVU7Hr1G043600.1 , HORVU7Hr1G043600.6 , HORVU7Hr1G043600.4 , HORVU7Hr1G043600.5 , HORVU5Hr1G085710.4 , HORVU5Hr1G085710.5 , HORVU5Hr1G085710.6 , HORVU5Hr1G085710.7 , HORVU5Hr1G085710.1 , HORVU5Hr1G085710.3 , HORVU5Hr1G085710.8 , HORVU5Hr1G085710.9 , HORVU5Hr1G085710.10 , HORVU5Hr1G085710.11
Wheat TraesCS5B02G342100 , TraesCS7D02G217400 , TraesCS5A02G342900 , TraesCS7B02G272700 , TraesCS7B02G122600 , TraesCS7B02G122600 , TraesCS7A02G355000 , TraesCS5D02G347600 , TraesCS7D02G367800
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G075301 - -
2 Sobic.005G193260 "alpha-kafirin locus, highly digestible high-lysine (hdhl) mutant P721Q"(PubMedID : 23948869) -
3 Sobic.005G192700 "alpha-kafirin locus, highly digestible high-lysine (hdhl) mutant P721Q"(PubMedID : 23948869)@- -
4 Sobic.005G185600 - -
5 Sobic.005G192900 "alpha-kafirin locus, highly digestible high-lysine (hdhl) mutant P721Q"(PubMedID : 23948869)@- -
6 Sobic.005G192901 "alpha-kafirin locus, highly digestible high-lysine (hdhl) mutant P721Q"(PubMedID : 23948869) -
7 Sobic.010G044600 GDSL-like lipase/acylhydrolase, putative, expressed -
8 Sobic.005G192801 "alpha-kafirin locus, highly digestible high-lysine (hdhl) mutant P721Q"(PubMedID : 23948869) -
9 Sobic.002G362400 uncharacterized 50.6 kDa protein in the 5region of gyrA and gyrB, putative, expressed -
10 Sobic.003G226000 polygalacturonase, putative, expressed K01184: polygalacturonase
11 Sobic.005G110000 LTPL151 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.005G169300 WIP5 - Wound-induced protein precursor, expressed -
13 Sobic.005G193100 "alpha-kafirin locus, highly digestible high-lysine (hdhl) mutant P721Q"(PubMedID : 23948869)@- -
14 Sobic.006G064400 desiccation-related protein PCC13-62 precursor, putative, expressed -
15 Sobic.001G381250 - -
16 Sobic.001G381250 - -
17 Sobic.001G381250 - -
18 Sobic.001G381250 - -
19 Sobic.001G381250 - -
20 Sobic.001G381250 - -


Gene co-expression network
sample Sobic010G164100 Sobic010G164100 Sobic007G075301 Sobic007G075301 Sobic010G164100--Sobic007G075301 Sobic005G193260 Sobic005G193260 Sobic010G164100--Sobic005G193260 Sobic005G192700 Sobic005G192700 Sobic010G164100--Sobic005G192700 Sobic005G185600 Sobic005G185600 Sobic010G164100--Sobic005G185600 Sobic005G192900 Sobic005G192900 Sobic010G164100--Sobic005G192900 Sobic005G192901 Sobic005G192901 Sobic010G164100--Sobic005G192901 Sobic010G044600 Sobic010G044600 Sobic010G164100--Sobic010G044600 Sobic005G192801 Sobic005G192801 Sobic010G164100--Sobic005G192801 Sobic002G362400 Sobic002G362400 Sobic010G164100--Sobic002G362400 Sobic007G075301--Sobic010G164100 Sobic007G075301--Sobic005G193260 Sobic007G075301--Sobic005G185600 Sobic007G075301--Sobic005G192700 Sobic007G075301--Sobic005G192900 Sobic007G075301--Sobic005G192901 Sobic007G075301--Sobic005G192801 Sobic007G029800 Sobic007G029800 Sobic007G075301--Sobic007G029800 Sobic007G075301--Sobic010G044600 Sobic005G193260--Sobic005G192900 Sobic005G193260--Sobic005G192700 Sobic005G193260--Sobic005G192901 Sobic005G193260--Sobic005G192801 Sobic005G193260--Sobic005G185600 Sobic001G381250 Sobic001G381250 Sobic005G193260--Sobic001G381250 Sobic005G192700--Sobic005G192901 Sobic005G192700--Sobic005G192801 Sobic005G192700--Sobic005G192900 Sobic005G192700--Sobic005G193260 Sobic005G192700--Sobic005G185600 Sobic005G193100 Sobic005G193100 Sobic005G192700--Sobic005G193100 Sobic005G192700--Sobic001G381250 Sobic005G185600--Sobic005G192700 Sobic005G185600--Sobic005G192801 Sobic005G185600--Sobic005G192901 Sobic005G185600--Sobic005G193100 Sobic005G185600--Sobic005G192900 Sobic005G185600--Sobic005G193260 Sobic005G185600--Sobic007G029800 Sobic005G185600--Sobic001G381250 Sobic005G192900--Sobic005G193260 Sobic005G192900--Sobic005G192700 Sobic005G192900--Sobic005G192901 Sobic005G192900--Sobic005G192801 Sobic005G192900--Sobic001G381250 Sobic005G192901--Sobic005G192801 Sobic005G192901--Sobic005G192700 Sobic005G192901--Sobic005G192900 Sobic005G192901--Sobic005G193100 Sobic005G192901--Sobic005G185600 Sobic005G192901--Sobic001G381250 Sobic010G044600--Sobic002G362400 Sobic005G110000 Sobic005G110000 Sobic010G044600--Sobic005G110000 Sobic010G237100 Sobic010G237100 Sobic010G044600--Sobic010G237100 Sobic005G169300 Sobic005G169300 Sobic010G044600--Sobic005G169300 Sobic010G044600--Sobic005G192901 Sobic010G044600--Sobic005G192801 Sobic010G044600--Sobic005G193100 Sobic010G044600--Sobic001G381250 Sobic005G192801--Sobic005G192901 Sobic005G192801--Sobic005G193100 Sobic005G192801--Sobic005G192700 Sobic005G192801--Sobic005G192900 Sobic005G192801--Sobic005G185600 Sobic005G192801--Sobic001G381250 Sobic002G362400--Sobic005G110000 Sobic003G226000 Sobic003G226000 Sobic002G362400--Sobic003G226000 Sobic005G199300 Sobic005G199300 Sobic002G362400--Sobic005G199300 Sobic002G362400--Sobic010G044600 Sobic002G274900 Sobic002G274900 Sobic002G362400--Sobic002G274900 Sobic002G370300 Sobic002G370300 Sobic002G362400--Sobic002G370300 Sobic007G001600 Sobic007G001600 Sobic002G362400--Sobic007G001600 Sobic005G087666 Sobic005G087666 Sobic002G362400--Sobic005G087666 Sobic002G362400--Sobic010G237100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.