Gene annotation
Transcriptome id Sobic.006G093500.1
Synonym ATHSP22.0, Sb06g017850,
Functional annotation Up-reguralion under heat (PubMedID : 24916767)
Up-reguralion under combine stress of drought and heat (PubMedID : 24916767)
hsp20/alpha crystallin family protein, putative, expressed
UniProt A0A1B6PL34
Pfam PF00011
Panther DB PTHR11527 PTHR11527:SF135
NCBI CDD KOG3591; Alpha crystallins
KEGG Orthology K13993; HSP20 family protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G10250 : HSP20-like chaperones superfamily protein
RAP-DB (Rice) LOC_Os04g36750.1 : hsp20/alpha crystallin family protein, putative, expressed
MaizeGDB (Corn) Zm00025a011230 , Zm00025a056137
Brachypodium KQJ82812
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G093500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G088600 universal stress protein domain containing protein, putative, expressed -
2 Sobic.009G209400 ubiquinone oxidoreductase, putative, expressed K03940: NADH dehydrogenase (ubiquinone) Fe-S protein 7
3 Sobic.002G317500 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
4 Sobic.009G115200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
5 Sobic.002G111400 heavy metal-associated domain containing protein, expressed -
6 Sobic.009G191801 - -
7 Sobic.004G092700 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
8 Sobic.004G195900 late embryogenesis abundant protein D-34, putative, expressed -
9 Sobic.002G302300 cysteine proteinase A494 precursor, putative, expressed K01373: cathepsin F
10 Sobic.004G083600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
11 Sobic.007G075250 - -
12 Sobic.003G363400 bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
13 Sobic.001G243666 - -
14 Sobic.006G121700 expressed protein -
15 Sobic.002G080900 - -
16 Sobic.001G534900 - -
17 Sobic.004G111500 Up-reguralion under drought(PubMedID : 24916767)@late embryogenesis abundant domain-containing protein, putative, expressed -
18 Sobic.010G106601 - K09422: transcription factor MYB, plant
19 Sobic.001G017500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed -
20 Sobic.010G041900 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@dehydrin, putative, expressed -


Gene co-expression network
sample Sobic006G093500 Sobic006G093500 Sobic001G088600 Sobic001G088600 Sobic006G093500--Sobic001G088600 Sobic009G209400 Sobic009G209400 Sobic006G093500--Sobic009G209400 Sobic002G317500 Sobic002G317500 Sobic006G093500--Sobic002G317500 Sobic009G115200 Sobic009G115200 Sobic006G093500--Sobic009G115200 Sobic002G111400 Sobic002G111400 Sobic006G093500--Sobic002G111400 Sobic009G191801 Sobic009G191801 Sobic006G093500--Sobic009G191801 Sobic004G092700 Sobic004G092700 Sobic006G093500--Sobic004G092700 Sobic004G195900 Sobic004G195900 Sobic006G093500--Sobic004G195900 Sobic002G302300 Sobic002G302300 Sobic006G093500--Sobic002G302300 Sobic001G088600--Sobic002G111400 Sobic001G088600--Sobic009G209400 Sobic001G088600--Sobic002G302300 Sobic001G088600--Sobic009G191801 Sobic007G075250 Sobic007G075250 Sobic001G088600--Sobic007G075250 Sobic001G088600--Sobic002G317500 Sobic006G121700 Sobic006G121700 Sobic001G088600--Sobic006G121700 Sobic001G243666 Sobic001G243666 Sobic001G088600--Sobic001G243666 Sobic010G106601 Sobic010G106601 Sobic001G088600--Sobic010G106601 Sobic009G209400--Sobic002G317500 Sobic009G209400--Sobic002G302300 Sobic009G209400--Sobic007G075250 Sobic009G209400--Sobic002G111400 Sobic009G209400--Sobic001G088600 Sobic001G017500 Sobic001G017500 Sobic009G209400--Sobic001G017500 Sobic009G209400--Sobic004G092700 Sobic002G118300 Sobic002G118300 Sobic009G209400--Sobic002G118300 Sobic009G209400--Sobic009G191801 Sobic002G317500--Sobic009G209400 Sobic002G317500--Sobic004G092700 Sobic002G317500--Sobic002G111400 Sobic002G317500--Sobic002G302300 Sobic002G317500--Sobic007G075250 Sobic002G317500--Sobic001G017500 Sobic002G317500--Sobic001G088600 Sobic010G041900 Sobic010G041900 Sobic002G317500--Sobic010G041900 Sobic002G317500--Sobic002G118300 Sobic009G115200--Sobic009G191801 Sobic004G083600 Sobic004G083600 Sobic009G115200--Sobic004G083600 Sobic009G115200--Sobic006G121700 Sobic009G115200--Sobic001G088600 Sobic009G115200--Sobic001G243666 Sobic009G115200--Sobic002G111400 Sobic009G115200--Sobic004G195900 Sobic009G227300 Sobic009G227300 Sobic009G115200--Sobic009G227300 Sobic004G190200 Sobic004G190200 Sobic009G115200--Sobic004G190200 Sobic002G111400--Sobic001G088600 Sobic002G111400--Sobic009G209400 Sobic002G111400--Sobic002G317500 Sobic002G111400--Sobic002G302300 Sobic002G111400--Sobic007G075250 Sobic002G111400--Sobic009G191801 Sobic002G111400--Sobic010G106601 Sobic002G111400--Sobic006G121700 Sobic002G111400--Sobic001G017500 Sobic009G191801--Sobic009G115200 Sobic009G191801--Sobic006G121700 Sobic009G191801--Sobic001G088600 Sobic009G191801--Sobic001G243666 Sobic009G191801--Sobic002G111400 Sobic009G191801--Sobic004G190200 Sobic009G191801--Sobic009G209400 Sobic010G164100 Sobic010G164100 Sobic009G191801--Sobic010G164100 Sobic009G191801--Sobic002G302300 Sobic004G092700--Sobic002G317500 Sobic003G270200 Sobic003G270200 Sobic004G092700--Sobic003G270200 Sobic004G092700--Sobic010G041900 Sobic003G130400 Sobic003G130400 Sobic004G092700--Sobic003G130400 Sobic004G092700--Sobic009G209400 Sobic002G185100 Sobic002G185100 Sobic004G092700--Sobic002G185100 Sobic004G092700--Sobic004G195900 Sobic004G092700--Sobic002G111400 Sobic007G162700 Sobic007G162700 Sobic004G092700--Sobic007G162700 Sobic004G111500 Sobic004G111500 Sobic004G195900--Sobic004G111500 Sobic004G195900--Sobic004G092700 Sobic001G091000 Sobic001G091000 Sobic004G195900--Sobic001G091000 Sobic004G195900--Sobic009G115200 Sobic001G241000 Sobic001G241000 Sobic004G195900--Sobic001G241000 Sobic001G311200 Sobic001G311200 Sobic004G195900--Sobic001G311200 Sobic004G195900--Sobic004G083600 Sobic004G195900--Sobic002G317500 Sobic004G195900--Sobic009G209400 Sobic002G302300--Sobic007G075250 Sobic002G302300--Sobic009G209400 Sobic002G302300--Sobic001G088600 Sobic002G302300--Sobic001G017500 Sobic002G302300--Sobic002G111400 Sobic002G302300--Sobic002G118300 Sobic002G302300--Sobic002G317500 Sobic006G107900 Sobic006G107900 Sobic002G302300--Sobic006G107900 Sobic002G391100 Sobic002G391100 Sobic002G302300--Sobic002G391100
Octagon: transcription factors


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