Gene annotation
Transcriptome id Sobic.006G121700.1
Synonym Sb06g020230
Functional annotation expressed protein
UniProt C5YAR9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os08g23170.1 : expressed protein
MaizeGDB (Corn) Zm00025a010981
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G121700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G243666 - -
2 Sobic.004G190200 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
3 Sobic.009G191801 - -
4 Sobic.010G164100 aquaporin protein, putative, expressed K09874: aquaporin NIP
5 Sobic.007G075301 - -
6 Sobic.001G088600 universal stress protein domain containing protein, putative, expressed -
7 Sobic.001G534900 - -
8 Sobic.004G294500 expansin precursor, putative, expressed -
9 Sobic.009G115200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
10 Sobic.002G111400 heavy metal-associated domain containing protein, expressed -
11 Sobic.002G141450 "TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054) -
12 Sobic.001G518700 DEF8 - Defensin and Defensin-like DEFL family, expressed -
13 Sobic.007G075250 - -
14 Sobic.002G302300 cysteine proteinase A494 precursor, putative, expressed K01373: cathepsin F
15 Sobic.010G106601 - K09422: transcription factor MYB, plant
16 Sobic.009G253800 aspartic proteinase, putative, expressed -
17 Sobic.001G324700 cysteine proteinase inhibitor 8 precursor, putative, expressed -
18 Sobic.004G037300 cycloartenol synthase, putative, expressed -
19 Sobic.010G274200 ZOS6-11 - C2H2 zinc finger protein, expressed -
20 Sobic.009G209400 ubiquinone oxidoreductase, putative, expressed K03940: NADH dehydrogenase (ubiquinone) Fe-S protein 7


Gene co-expression network
sample Sobic006G121700 Sobic006G121700 Sobic001G243666 Sobic001G243666 Sobic006G121700--Sobic001G243666 Sobic004G190200 Sobic004G190200 Sobic006G121700--Sobic004G190200 Sobic009G191801 Sobic009G191801 Sobic006G121700--Sobic009G191801 Sobic010G164100 Sobic010G164100 Sobic006G121700--Sobic010G164100 Sobic007G075301 Sobic007G075301 Sobic006G121700--Sobic007G075301 Sobic001G088600 Sobic001G088600 Sobic006G121700--Sobic001G088600 Sobic001G534900 Sobic001G534900 Sobic006G121700--Sobic001G534900 Sobic004G294500 Sobic004G294500 Sobic006G121700--Sobic004G294500 Sobic009G115200 Sobic009G115200 Sobic006G121700--Sobic009G115200 Sobic001G243666--Sobic006G121700 Sobic001G243666--Sobic009G191801 Sobic001G243666--Sobic004G190200 Sobic001G243666--Sobic010G164100 Sobic001G243666--Sobic001G088600 Sobic001G243666--Sobic007G075301 Sobic001G243666--Sobic001G534900 Sobic002G111400 Sobic002G111400 Sobic001G243666--Sobic002G111400 Sobic001G243666--Sobic009G115200 Sobic004G190200--Sobic006G121700 Sobic004G190200--Sobic001G243666 Sobic009G253800 Sobic009G253800 Sobic004G190200--Sobic009G253800 Sobic004G190200--Sobic004G294500 Sobic004G190200--Sobic010G164100 Sobic004G190200--Sobic009G191801 Sobic002G141450 Sobic002G141450 Sobic004G190200--Sobic002G141450 Sobic004G190200--Sobic007G075301 Sobic001G518700 Sobic001G518700 Sobic004G190200--Sobic001G518700 Sobic009G191801--Sobic009G115200 Sobic009G191801--Sobic006G121700 Sobic009G191801--Sobic001G088600 Sobic009G191801--Sobic001G243666 Sobic009G191801--Sobic002G111400 Sobic009G191801--Sobic004G190200 Sobic009G209400 Sobic009G209400 Sobic009G191801--Sobic009G209400 Sobic009G191801--Sobic010G164100 Sobic002G302300 Sobic002G302300 Sobic009G191801--Sobic002G302300 Sobic010G164100--Sobic007G075301 Sobic005G193260 Sobic005G193260 Sobic010G164100--Sobic005G193260 Sobic005G192700 Sobic005G192700 Sobic010G164100--Sobic005G192700 Sobic005G185600 Sobic005G185600 Sobic010G164100--Sobic005G185600 Sobic005G192900 Sobic005G192900 Sobic010G164100--Sobic005G192900 Sobic005G192901 Sobic005G192901 Sobic010G164100--Sobic005G192901 Sobic010G044600 Sobic010G044600 Sobic010G164100--Sobic010G044600 Sobic005G192801 Sobic005G192801 Sobic010G164100--Sobic005G192801 Sobic002G362400 Sobic002G362400 Sobic010G164100--Sobic002G362400 Sobic007G075301--Sobic010G164100 Sobic007G075301--Sobic005G193260 Sobic007G075301--Sobic005G185600 Sobic007G075301--Sobic005G192700 Sobic007G075301--Sobic005G192900 Sobic007G075301--Sobic005G192901 Sobic007G075301--Sobic005G192801 Sobic007G029800 Sobic007G029800 Sobic007G075301--Sobic007G029800 Sobic007G075301--Sobic010G044600 Sobic001G088600--Sobic002G111400 Sobic001G088600--Sobic009G209400 Sobic001G088600--Sobic002G302300 Sobic001G088600--Sobic009G191801 Sobic007G075250 Sobic007G075250 Sobic001G088600--Sobic007G075250 Sobic002G317500 Sobic002G317500 Sobic001G088600--Sobic002G317500 Sobic001G088600--Sobic006G121700 Sobic001G088600--Sobic001G243666 Sobic010G106601 Sobic010G106601 Sobic001G088600--Sobic010G106601 Sobic001G534900--Sobic006G121700 Sobic001G534900--Sobic001G243666 Sobic001G534900--Sobic004G190200 Sobic001G534900--Sobic001G088600 Sobic001G534900--Sobic002G111400 Sobic001G534900--Sobic009G191801 Sobic001G534900--Sobic007G075250 Sobic001G534900--Sobic010G164100 Sobic001G534900--Sobic002G302300 Sobic009G007500 Sobic009G007500 Sobic004G294500--Sobic009G007500 Sobic004G294500--Sobic001G518700 Sobic008G088450 Sobic008G088450 Sobic004G294500--Sobic008G088450 Sobic008G088881 Sobic008G088881 Sobic004G294500--Sobic008G088881 Sobic004G294500--Sobic009G253800 Sobic006G062700 Sobic006G062700 Sobic004G294500--Sobic006G062700 Sobic001G112250 Sobic001G112250 Sobic004G294500--Sobic001G112250 Sobic003G024700 Sobic003G024700 Sobic004G294500--Sobic003G024700 Sobic008G103066 Sobic008G103066 Sobic004G294500--Sobic008G103066 Sobic009G115200--Sobic009G191801 Sobic004G083600 Sobic004G083600 Sobic009G115200--Sobic004G083600 Sobic009G115200--Sobic006G121700 Sobic009G115200--Sobic001G088600 Sobic009G115200--Sobic001G243666 Sobic009G115200--Sobic002G111400 Sobic004G195900 Sobic004G195900 Sobic009G115200--Sobic004G195900 Sobic009G227300 Sobic009G227300 Sobic009G115200--Sobic009G227300 Sobic009G115200--Sobic004G190200
Octagon: transcription factors


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