Gene annotation
Transcriptome id Sobic.004G190200.1
Synonym Sb04g023830
Functional annotation aldose 1-epimerase, putative, expressed
UniProt C5XVP8
Pfam PF01263
Panther DB PTHR10091 PTHR10091:SF9
NCBI CDD KOG1604; Predicted mutarotase
KEGG Orthology K01785; galM, aldose 1-epimerase
Gene Ontology GO:0016853; isomerase activity GO:0005975carbohydrate metabolic process


Orthologs (automatic annotation)
TAIR AT5G15140 : Galactose mutarotase-like superfamily protein
RAP-DB (Rice) LOC_Os02g36600.1 : aldose 1-epimerase, putative, expressed
MaizeGDB (Corn) Zm00025a020797 , Zm00025a011134
Brachypodium KQK00016 , KQJ82952 , KQJ82953 , KQJ82956
Barley HORVU2Hr1G080070.1 , HORVU2Hr1G080070.3 , HORVU2Hr1G080100.11 , HORVU2Hr1G080100.10 , HORVU2Hr1G080100.12 , HORVU7Hr1G034070.6 , HORVU7Hr1G034070.2 , HORVU2Hr1G080070.2 , HORVU7Hr1G034070.7 , HORVU7Hr1G034070.4 , HORVU2Hr1G080050.3 , HORVU2Hr1G080050.2 , HORVU2Hr1G080050.1 , HORVU2Hr1G080050.6 , HORVU2Hr1G080050.5 , HORVU2Hr1G080050.4 , HORVU2Hr1G080100.9 , HORVU2Hr1G080100.8 , HORVU2Hr1G080100.5 , HORVU2Hr1G080100.7 , HORVU2Hr1G080100.6 , HORVU2Hr1G080100.1 , HORVU2Hr1G080100.3 , HORVU2Hr1G080100.2 , HORVU2Hr1G080140.1 , HORVU2Hr1G080140.3 , HORVU2Hr1G080140.2 , HORVU2Hr1G080140.5 , HORVU2Hr1G080140.4 , HORVU2Hr1G080140.7 , HORVU2Hr1G080140.6 , HORVU2Hr1G080060.2 , HORVU2Hr1G080060.3 , HORVU2Hr1G080060.1 , HORVU2Hr1G080060.4
Wheat TraesCS7D02G163100 , TraesCS7B02G067200 , TraesCS7D02G163100 , TraesCS2B02G341100 , TraesCS2A02G343600 , TraesCS2A02G343600 , TraesCS2D02G321700 , TraesCS7B02G067000 , TraesCS2B02G340900 , TraesCS2B02G341200 , TraesCS2D02G321800 , TraesCS2B02G341000 , TraesCS2B02G341400 , TraesCS2B02G341400 , TraesCS2A02G343300 , TraesCS2D02G321600 , TraesCS2D02G321900
Populus -


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cDNA sequences
Sobic.004G190200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G121700 expressed protein -
2 Sobic.001G243666 - -
3 Sobic.009G253800 aspartic proteinase, putative, expressed -
4 Sobic.004G294500 expansin precursor, putative, expressed -
5 Sobic.010G164100 aquaporin protein, putative, expressed K09874: aquaporin NIP
6 Sobic.009G191801 - -
7 Sobic.002G141450 "TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054) -
8 Sobic.007G075301 - -
9 Sobic.001G518700 DEF8 - Defensin and Defensin-like DEFL family, expressed -
10 Sobic.001G534900 - -
11 Sobic.009G007500 DNA binding protein, putative, expressed -
12 Sobic.007G023600 ATP binding protein, putative, expressed -
13 Sobic.004G037300 cycloartenol synthase, putative, expressed -
14 Sobic.003G242200 Up-reguralion under drought(PubMedID : 24916767)@protein phosphatase 2C, putative, expressed K14497: protein phosphatase 2C
15 Sobic.007G091200 wax synthase isoform 1, putative, expressed -
16 Sobic.010G274200 ZOS6-11 - C2H2 zinc finger protein, expressed -
17 Sobic.001G088600 universal stress protein domain containing protein, putative, expressed -
18 Sobic.008G088881 - -
19 Sobic.001G170500 expressed protein -
20 Sobic.009G115200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -


Gene co-expression network
sample Sobic004G190200 Sobic004G190200 Sobic006G121700 Sobic006G121700 Sobic004G190200--Sobic006G121700 Sobic001G243666 Sobic001G243666 Sobic004G190200--Sobic001G243666 Sobic009G253800 Sobic009G253800 Sobic004G190200--Sobic009G253800 Sobic004G294500 Sobic004G294500 Sobic004G190200--Sobic004G294500 Sobic010G164100 Sobic010G164100 Sobic004G190200--Sobic010G164100 Sobic009G191801 Sobic009G191801 Sobic004G190200--Sobic009G191801 Sobic002G141450 Sobic002G141450 Sobic004G190200--Sobic002G141450 Sobic007G075301 Sobic007G075301 Sobic004G190200--Sobic007G075301 Sobic001G518700 Sobic001G518700 Sobic004G190200--Sobic001G518700 Sobic006G121700--Sobic001G243666 Sobic006G121700--Sobic004G190200 Sobic006G121700--Sobic009G191801 Sobic006G121700--Sobic010G164100 Sobic006G121700--Sobic007G075301 Sobic001G088600 Sobic001G088600 Sobic006G121700--Sobic001G088600 Sobic001G534900 Sobic001G534900 Sobic006G121700--Sobic001G534900 Sobic006G121700--Sobic004G294500 Sobic009G115200 Sobic009G115200 Sobic006G121700--Sobic009G115200 Sobic001G243666--Sobic006G121700 Sobic001G243666--Sobic009G191801 Sobic001G243666--Sobic004G190200 Sobic001G243666--Sobic010G164100 Sobic001G243666--Sobic001G088600 Sobic001G243666--Sobic007G075301 Sobic001G243666--Sobic001G534900 Sobic002G111400 Sobic002G111400 Sobic001G243666--Sobic002G111400 Sobic001G243666--Sobic009G115200 Sobic009G253800--Sobic004G294500 Sobic009G253800--Sobic004G190200 Sobic009G007500 Sobic009G007500 Sobic009G253800--Sobic009G007500 Sobic007G091200 Sobic007G091200 Sobic009G253800--Sobic007G091200 Sobic009G253800--Sobic001G518700 Sobic009G253800--Sobic002G141450 Sobic001G170500 Sobic001G170500 Sobic009G253800--Sobic001G170500 Sobic008G088450 Sobic008G088450 Sobic009G253800--Sobic008G088450 Sobic007G023600 Sobic007G023600 Sobic009G253800--Sobic007G023600 Sobic004G294500--Sobic009G007500 Sobic004G294500--Sobic001G518700 Sobic004G294500--Sobic008G088450 Sobic008G088881 Sobic008G088881 Sobic004G294500--Sobic008G088881 Sobic004G294500--Sobic009G253800 Sobic006G062700 Sobic006G062700 Sobic004G294500--Sobic006G062700 Sobic001G112250 Sobic001G112250 Sobic004G294500--Sobic001G112250 Sobic003G024700 Sobic003G024700 Sobic004G294500--Sobic003G024700 Sobic008G103066 Sobic008G103066 Sobic004G294500--Sobic008G103066 Sobic010G164100--Sobic007G075301 Sobic005G193260 Sobic005G193260 Sobic010G164100--Sobic005G193260 Sobic005G192700 Sobic005G192700 Sobic010G164100--Sobic005G192700 Sobic005G185600 Sobic005G185600 Sobic010G164100--Sobic005G185600 Sobic005G192900 Sobic005G192900 Sobic010G164100--Sobic005G192900 Sobic005G192901 Sobic005G192901 Sobic010G164100--Sobic005G192901 Sobic010G044600 Sobic010G044600 Sobic010G164100--Sobic010G044600 Sobic005G192801 Sobic005G192801 Sobic010G164100--Sobic005G192801 Sobic002G362400 Sobic002G362400 Sobic010G164100--Sobic002G362400 Sobic009G191801--Sobic009G115200 Sobic009G191801--Sobic006G121700 Sobic009G191801--Sobic001G088600 Sobic009G191801--Sobic001G243666 Sobic009G191801--Sobic002G111400 Sobic009G191801--Sobic004G190200 Sobic009G209400 Sobic009G209400 Sobic009G191801--Sobic009G209400 Sobic009G191801--Sobic010G164100 Sobic002G302300 Sobic002G302300 Sobic009G191801--Sobic002G302300 Sobic010G274200 Sobic010G274200 Sobic002G141450--Sobic010G274200 Sobic002G141450--Sobic004G294500 Sobic009G040100 Sobic009G040100 Sobic002G141450--Sobic009G040100 Sobic002G141450--Sobic009G007500 Sobic002G141450--Sobic009G253800 Sobic002G141450--Sobic004G190200 Sobic005G116000 Sobic005G116000 Sobic002G141450--Sobic005G116000 Sobic002G141450--Sobic010G164100 Sobic005G051700 Sobic005G051700 Sobic002G141450--Sobic005G051700 Sobic007G075301--Sobic010G164100 Sobic007G075301--Sobic005G193260 Sobic007G075301--Sobic005G185600 Sobic007G075301--Sobic005G192700 Sobic007G075301--Sobic005G192900 Sobic007G075301--Sobic005G192901 Sobic007G075301--Sobic005G192801 Sobic007G029800 Sobic007G029800 Sobic007G075301--Sobic007G029800 Sobic007G075301--Sobic010G044600 Sobic001G518700--Sobic009G007500 Sobic001G518700--Sobic004G294500 Sobic001G518700--Sobic001G112250 Sobic001G518700--Sobic008G088450 Sobic001G518700--Sobic008G103066 Sobic001G518700--Sobic007G091200 Sobic003G156100 Sobic003G156100 Sobic001G518700--Sobic003G156100 Sobic002G077600 Sobic002G077600 Sobic001G518700--Sobic002G077600 Sobic007G070700 Sobic007G070700 Sobic001G518700--Sobic007G070700
Octagon: transcription factors


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