Gene annotation
| Transcriptome id | Sobic.001G088600.1 |
|---|---|
| Synonym | Sb01g007990 |
| Functional annotation | universal stress protein domain containing protein, putative, expressed |
| UniProt | C5X0B0 |
| Pfam | PF00582 |
| Panther DB | PTHR31964 PTHR31964:SF38 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | GO:0006950; response to stress |
Orthologs (automatic annotation)
| TAIR | AT3G11930 : Adenine nucleotide alpha hydrolases-like superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os03g53900.1 : universal stress protein domain containing protein, putative, expressed |
| MaizeGDB (Corn) | Zm00025a008167 |
| Brachypodium | - |
| Barley | HORVU5Hr1G095160.2 , HORVU5Hr1G095160.3 , HORVU5Hr1G095160.1 , HORVU5Hr1G095180.4 , HORVU5Hr1G095180.5 , HORVU5Hr1G095180.1 , HORVU5Hr1G095180.2 , HORVU5Hr1G095180.3 |
| Wheat | TraesCS5A02G389700 , TraesCS5D02G399600 , TraesCS5D02G399400 , TraesCS5D02G399400 , TraesCS5B02G394700 , TraesCS5A02G389500 , TraesCS5B02G394600 , TraesCS5B02G394600 , TraesCS5B02G394600 , TraesCS5A02G389400 , TraesCS5A02G389400 , TraesCS5D02G399500 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.002G111400 | heavy metal-associated domain containing protein, expressed | - |
| 2 | Sobic.009G209400 | ubiquinone oxidoreductase, putative, expressed | K03940: NADH dehydrogenase (ubiquinone) Fe-S protein 7 |
| 3 | Sobic.002G302300 | cysteine proteinase A494 precursor, putative, expressed | K01373: cathepsin F |
| 4 | Sobic.009G191801 | - | - |
| 5 | Sobic.007G075250 | - | - |
| 6 | Sobic.002G317500 | protein phosphatase 2C, putative, expressed | K17506: PPM1L, protein phosphatase 1L |
| 7 | Sobic.006G121700 | expressed protein | - |
| 8 | Sobic.001G243666 | - | - |
| 9 | Sobic.010G106601 | - | K09422: transcription factor MYB, plant |
| 10 | Sobic.009G115200 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed | - |
| 11 | Sobic.001G017500 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed | - |
| 12 | Sobic.001G534900 | - | - |
| 13 | Sobic.004G190200 | aldose 1-epimerase, putative, expressed | K01785: galM, aldose 1-epimerase |
| 14 | Sobic.003G363400 | bZIP transcription factor, putative, expressed | K14432: ABA responsive element binding factor |
| 15 | Sobic.004G092700 | Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed | K13993: HSP20 family protein |
| 16 | Sobic.002G118300 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@AWPM-19-like membrane family protein, putative, expressed | - |
| 17 | Sobic.006G107900 | uncharacterized Cys-rich domain containing protein, putative, expressed | - |
| 18 | Sobic.004G071050 | - | - |
| 19 | Sobic.006G093500 | Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed | K13993: HSP20 family protein |
| 20 | Sobic.002G391100 | Thioredoxin peroxidase (Os)(PubMedID : 27208977)@peroxiredoxin, putative, expressed | K11188: peroxiredoxin 6 |
Gene co-expression network
Octagon: transcription factors
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