Gene annotation
Transcriptome id Sobic.001G241000.1
Synonym Sb01g021320
Functional annotation late embryogenesis abundant protein D-34, putative, expressed
UniProt C5X1D3
Pfam PF04927
Panther DB PTHR31174 PTHR31174:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G22490 : Seed maturation protein
RAP-DB (Rice) LOC_Os03g06360.1 : late embryogenesis abundant protein D-34, putative, expressed
MaizeGDB (Corn) Zm00025a006846
Brachypodium -
Barley HORVU4Hr1G073120.1
Wheat TraesCS4D02G273900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G111500 Up-reguralion under drought(PubMedID : 24916767)@late embryogenesis abundant domain-containing protein, putative, expressed -
2 Sobic.004G195900 late embryogenesis abundant protein D-34, putative, expressed -
3 Sobic.001G091000 late embryogenesis abundant protein D-34, putative, expressed -
4 Sobic.009G115200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
5 Sobic.003G302466 - -
6 Sobic.004G083600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
7 Sobic.001G090900 late embryogenesis abundant protein D-34, putative, expressed -
8 Sobic.009G227300 "BG3(Ortholog in rice:Xiao et al., 2018)"(PubMedID : 31659926)@purine permease, putative, expressed -
9 Sobic.002G282800 "Decreased expression levels by drought stress, up-regulated by silicon application under drought stress "(PubMedID : 24813726)@pyridoxal-dependent decarboxylase protein, putative, expressed K01581: E4.1.1.17, ODC1, speC, ornithine decarboxylase
10 Sobic.001G311200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
11 Sobic.004G092700 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
12 Sobic.010G207450 - -
13 Sobic.009G191801 - -
14 Sobic.002G111400 heavy metal-associated domain containing protein, expressed -
15 Sobic.002G059100 OsFBX239 - F-box domain containing protein, expressed -
16 Sobic.002G243100 expressed protein -
17 Sobic.009G185000 - -
18 Sobic.003G270200 dehydrin family protein, expressed -
19 Sobic.007G004900 expressed protein -
20 Sobic.001G495850 - -


Gene co-expression network
sample Sobic001G241000 Sobic001G241000 Sobic004G111500 Sobic004G111500 Sobic001G241000--Sobic004G111500 Sobic004G195900 Sobic004G195900 Sobic001G241000--Sobic004G195900 Sobic001G091000 Sobic001G091000 Sobic001G241000--Sobic001G091000 Sobic009G115200 Sobic009G115200 Sobic001G241000--Sobic009G115200 Sobic003G302466 Sobic003G302466 Sobic001G241000--Sobic003G302466 Sobic004G083600 Sobic004G083600 Sobic001G241000--Sobic004G083600 Sobic001G090900 Sobic001G090900 Sobic001G241000--Sobic001G090900 Sobic009G227300 Sobic009G227300 Sobic001G241000--Sobic009G227300 Sobic002G282800 Sobic002G282800 Sobic001G241000--Sobic002G282800 Sobic004G111500--Sobic001G091000 Sobic001G311200 Sobic001G311200 Sobic004G111500--Sobic001G311200 Sobic004G111500--Sobic004G195900 Sobic007G004900 Sobic007G004900 Sobic004G111500--Sobic007G004900 Sobic004G111500--Sobic001G241000 Sobic004G092700 Sobic004G092700 Sobic004G111500--Sobic004G092700 Sobic002G243100 Sobic002G243100 Sobic004G111500--Sobic002G243100 Sobic004G111500--Sobic001G090900 Sobic006G084100 Sobic006G084100 Sobic004G111500--Sobic006G084100 Sobic004G195900--Sobic004G111500 Sobic004G195900--Sobic004G092700 Sobic004G195900--Sobic001G091000 Sobic004G195900--Sobic009G115200 Sobic004G195900--Sobic001G241000 Sobic004G195900--Sobic001G311200 Sobic004G195900--Sobic004G083600 Sobic002G317500 Sobic002G317500 Sobic004G195900--Sobic002G317500 Sobic009G209400 Sobic009G209400 Sobic004G195900--Sobic009G209400 Sobic001G091000--Sobic004G111500 Sobic001G091000--Sobic001G311200 Sobic001G091000--Sobic007G004900 Sobic001G091000--Sobic004G195900 Sobic001G091000--Sobic001G241000 Sobic001G091000--Sobic004G092700 Sobic001G091000--Sobic002G243100 Sobic001G091000--Sobic006G084100 Sobic004G196900 Sobic004G196900 Sobic001G091000--Sobic004G196900 Sobic009G191801 Sobic009G191801 Sobic009G115200--Sobic009G191801 Sobic009G115200--Sobic004G083600 Sobic006G121700 Sobic006G121700 Sobic009G115200--Sobic006G121700 Sobic001G088600 Sobic001G088600 Sobic009G115200--Sobic001G088600 Sobic001G243666 Sobic001G243666 Sobic009G115200--Sobic001G243666 Sobic002G111400 Sobic002G111400 Sobic009G115200--Sobic002G111400 Sobic009G115200--Sobic004G195900 Sobic009G115200--Sobic009G227300 Sobic004G190200 Sobic004G190200 Sobic009G115200--Sobic004G190200 Sobic010G274300 Sobic010G274300 Sobic003G302466--Sobic010G274300 Sobic004G105300 Sobic004G105300 Sobic003G302466--Sobic004G105300 Sobic002G211501 Sobic002G211501 Sobic003G302466--Sobic002G211501 Sobic001G059800 Sobic001G059800 Sobic003G302466--Sobic001G059800 Sobic007G172800 Sobic007G172800 Sobic003G302466--Sobic007G172800 Sobic002G059100 Sobic002G059100 Sobic003G302466--Sobic002G059100 Sobic010G216800 Sobic010G216800 Sobic003G302466--Sobic010G216800 Sobic001G203100 Sobic001G203100 Sobic003G302466--Sobic001G203100 Sobic004G068000 Sobic004G068000 Sobic003G302466--Sobic004G068000 Sobic004G083600--Sobic009G115200 Sobic004G083600--Sobic009G191801 Sobic004G083600--Sobic004G195900 Sobic004G083600--Sobic001G241000 Sobic004G083600--Sobic004G111500 Sobic004G083600--Sobic001G088600 Sobic004G083600--Sobic009G227300 Sobic004G083600--Sobic002G111400 Sobic006G093500 Sobic006G093500 Sobic004G083600--Sobic006G093500 Sobic009G185000 Sobic009G185000 Sobic001G090900--Sobic009G185000 Sobic001G090900--Sobic002G282800 Sobic001G090900--Sobic004G196900 Sobic001G090900--Sobic002G243100 Sobic005G102600 Sobic005G102600 Sobic001G090900--Sobic005G102600 Sobic002G089300 Sobic002G089300 Sobic001G090900--Sobic002G089300 Sobic006G229400 Sobic006G229400 Sobic001G090900--Sobic006G229400 Sobic005G029300 Sobic005G029300 Sobic001G090900--Sobic005G029300 Sobic001G090900--Sobic004G111500 Sobic009G227300--Sobic009G115200 Sobic009G227300--Sobic001G241000 Sobic009G227300--Sobic004G083600 Sobic009G227300--Sobic009G191801 Sobic009G227300--Sobic004G195900 Sobic010G069700 Sobic010G069700 Sobic009G227300--Sobic010G069700 Sobic009G227300--Sobic001G203100 Sobic009G227300--Sobic002G282800 Sobic009G227300--Sobic007G172800 Sobic002G282800--Sobic009G185000 Sobic002G282800--Sobic001G090900 Sobic002G282800--Sobic005G102600 Sobic002G282800--Sobic010G069700 Sobic002G018250 Sobic002G018250 Sobic002G282800--Sobic002G018250 Sobic002G282800--Sobic002G089300 Sobic002G141050 Sobic002G141050 Sobic002G282800--Sobic002G141050 Sobic010G207450 Sobic010G207450 Sobic002G282800--Sobic010G207450 Sobic002G282800--Sobic005G029300
Octagon: transcription factors


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