Gene annotation
Transcriptome id Sobic.003G015700.1
Synonym GH9C3, Sb03g001560, AtGH9C3
Functional annotation endoglucanase precursor, putative, expressed
UniProt C5XKE9
Pfam PF09478 PF00759
Panther DB PTHR22298 PTHR22298:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT4G11050 : glycosyl hydrolase 9C3
RAP-DB (Rice) LOC_Os01g12070.1 : endoglucanase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a040249 , Zm00025a037591 , Zm00025a022345 , Zm00025a018779 , Zm00025a047771 , Zm00025a035938 , Zm00025a036077
Brachypodium KQK03329 , KQJ98076 , KQK07034 , PNT65007 , KQJ98077 , KQK20451 , PNT64837 , KQJ98284
Barley HORVU1Hr1G085830.1 , HORVU1Hr1G085830.3 , HORVU1Hr1G085830.2 , HORVU1Hr1G085830.5 , HORVU1Hr1G085830.4 , HORVU1Hr1G085830.7 , HORVU1Hr1G085830.6 , HORVU2Hr1G123870.1 , HORVU2Hr1G123870.3 , HORVU2Hr1G123870.2 , HORVU2Hr1G123870.4 , HORVU4Hr1G087990.2 , HORVU4Hr1G087990.5 , HORVU4Hr1G087990.4 , HORVU4Hr1G087990.6 , HORVU7Hr1G029660.1 , HORVU7Hr1G029660.2 , HORVU7Hr1G029660.3 , HORVU3Hr1G029470.1 , HORVU3Hr1G029470.3 , HORVU3Hr1G029470.2 , HORVU3Hr1G029470.5 , HORVU3Hr1G029470.4 , HORVU3Hr1G029470.7 , HORVU3Hr1G029470.6 , HORVU3Hr1G029470.9 , HORVU3Hr1G029470.8 , HORVU1Hr1G019520.6 , HORVU1Hr1G019520.4 , HORVU1Hr1G019520.5 , HORVU1Hr1G019520.2 , HORVU1Hr1G019520.3 , HORVU1Hr1G019520.1 , HORVU5Hr1G081200.5 , HORVU5Hr1G081200.2 , HORVU5Hr1G081200.3 , HORVU5Hr1G081200.9 , HORVU7Hr1G029680.4 , HORVU7Hr1G029680.2 , HORVU7Hr1G029680.3 , HORVU7Hr1G029680.1 , HORVU0Hr1G023830.4 , HORVU0Hr1G023830.5 , HORVU0Hr1G023830.6 , HORVU0Hr1G023830.1 , HORVU0Hr1G023830.2 , HORVU0Hr1G023830.3
Wheat TraesCS1D02G397400 , TraesCS5A02G317400 , TraesCS3D02G153400 , TraesCS1B02G107700 , TraesCS6A02G122100 , TraesCS7A02G144500 , TraesCS7D02G146000 , TraesCS4B02G104500 , TraesCS1D02G090100 , TraesCSU02G093600 , TraesCS6B02G150300 , TraesCS7A02G144700 , TraesCS1B02G377100 , TraesCS6D02G112100 , TraesCS5A02G202600 , TraesCS1A02G389300 , TraesCS1A02G088700 , TraesCS3A02G144600 , TraesCS7B02G046900 , TraesCS5B02G318000 , TraesCS1A02G360700 , TraesCS1A02G360700 , TraesCS1A02G360700 , TraesCS1D02G365100 , TraesCS5D02G323700 , TraesCS5D02G323700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G227900 STIGL3 - Stigma-specific Stig1 family protein precursor, putative, expressed -
2 Sobic.004G041600 homeobox associated leucine zipper, putative, expressed -
3 Sobic.004G341600 O-methyltransferase, putative, expressed -
4 Sobic.002G321200 vrga1, putative, expressed -
5 Sobic.009G215700 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@late embryogenesis abundant protein, group 3, putative, expressed -
6 Sobic.009G251700 DNA ligase, putative, expressed -
7 Sobic.004G202900 Ser/Thr protein phosphatase family protein, putative, expressed -
8 Sobic.K044402 - -
9 Sobic.003G363600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@transcription factor, putative, expressed K14431: transcription factor TGA
10 Sobic.002G075300 receptor kinase, putative, expressed -
11 Sobic.006G116200 receptor protein kinase CLAVATA1 precursor, putative, expressed -
12 Sobic.001G492000 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@embryonic protein DC-8, putative, expressed -
13 Sobic.010G174000 1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
14 Sobic.001G423900 - -
15 Sobic.002G163950 - -
16 Sobic.001G325500 expressed protein -
17 Sobic.006G009800 - -
18 Sobic.006G232100 expressed protein -
19 Sobic.003G059600 glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase
20 Sobic.002G025900 expressed protein -


Gene co-expression network
sample Sobic003G015700 Sobic003G015700 Sobic005G227900 Sobic005G227900 Sobic003G015700--Sobic005G227900 Sobic004G041600 Sobic004G041600 Sobic003G015700--Sobic004G041600 Sobic004G341600 Sobic004G341600 Sobic003G015700--Sobic004G341600 Sobic002G321200 Sobic002G321200 Sobic003G015700--Sobic002G321200 Sobic009G215700 Sobic009G215700 Sobic003G015700--Sobic009G215700 Sobic009G251700 Sobic009G251700 Sobic003G015700--Sobic009G251700 Sobic004G202900 Sobic004G202900 Sobic003G015700--Sobic004G202900 SobicK044402 SobicK044402 Sobic003G015700--SobicK044402 Sobic003G363600 Sobic003G363600 Sobic003G015700--Sobic003G363600 Sobic005G227900--Sobic004G041600 Sobic005G227900--SobicK044402 Sobic005G227900--Sobic003G015700 Sobic008G014601 Sobic008G014601 Sobic005G227900--Sobic008G014601 Sobic007G055400 Sobic007G055400 Sobic005G227900--Sobic007G055400 Sobic007G115600 Sobic007G115600 Sobic005G227900--Sobic007G115600 Sobic001G423900 Sobic001G423900 Sobic005G227900--Sobic001G423900 Sobic007G176300 Sobic007G176300 Sobic005G227900--Sobic007G176300 Sobic002G342901 Sobic002G342901 Sobic005G227900--Sobic002G342901 Sobic004G041600--Sobic005G227900 Sobic004G041600--Sobic003G015700 Sobic010G170150 Sobic010G170150 Sobic004G041600--Sobic010G170150 Sobic007G151700 Sobic007G151700 Sobic004G041600--Sobic007G151700 Sobic004G041600--SobicK044402 Sobic002G373700 Sobic002G373700 Sobic004G041600--Sobic002G373700 Sobic004G041600--Sobic003G363600 Sobic004G041600--Sobic008G014601 Sobic004G041600--Sobic007G115600 Sobic004G341600--Sobic004G202900 Sobic006G232100 Sobic006G232100 Sobic004G341600--Sobic006G232100 Sobic002G153600 Sobic002G153600 Sobic004G341600--Sobic002G153600 Sobic002G075300 Sobic002G075300 Sobic004G341600--Sobic002G075300 Sobic004G341600--Sobic003G015700 Sobic004G341600--Sobic003G363600 Sobic008G174850 Sobic008G174850 Sobic004G341600--Sobic008G174850 Sobic002G075100 Sobic002G075100 Sobic004G341600--Sobic002G075100 Sobic003G373050 Sobic003G373050 Sobic004G341600--Sobic003G373050 Sobic008G053500 Sobic008G053500 Sobic002G321200--Sobic008G053500 Sobic002G321200--Sobic002G075300 Sobic006G199601 Sobic006G199601 Sobic002G321200--Sobic006G199601 Sobic001G325100 Sobic001G325100 Sobic002G321200--Sobic001G325100 Sobic002G075400 Sobic002G075400 Sobic002G321200--Sobic002G075400 Sobic010G055900 Sobic010G055900 Sobic002G321200--Sobic010G055900 Sobic002G365200 Sobic002G365200 Sobic002G321200--Sobic002G365200 Sobic001G449300 Sobic001G449300 Sobic002G321200--Sobic001G449300 Sobic008G138850 Sobic008G138850 Sobic002G321200--Sobic008G138850 Sobic001G492000 Sobic001G492000 Sobic009G215700--Sobic001G492000 Sobic002G151200 Sobic002G151200 Sobic009G215700--Sobic002G151200 Sobic001G109000 Sobic001G109000 Sobic009G215700--Sobic001G109000 Sobic006G269501 Sobic006G269501 Sobic009G215700--Sobic006G269501 Sobic001G354800 Sobic001G354800 Sobic009G215700--Sobic001G354800 Sobic001G200700 Sobic001G200700 Sobic009G215700--Sobic001G200700 Sobic002G132500 Sobic002G132500 Sobic009G215700--Sobic002G132500 Sobic006G118500 Sobic006G118500 Sobic009G215700--Sobic006G118500 Sobic006G104000 Sobic006G104000 Sobic009G215700--Sobic006G104000 Sobic002G334100 Sobic002G334100 Sobic009G251700--Sobic002G334100 Sobic009G251700--Sobic002G321200 Sobic009G251700--Sobic008G174850 Sobic009G251700--Sobic003G015700 Sobic009G251700--Sobic002G075400 Sobic009G251700--Sobic004G341600 Sobic007G132300 Sobic007G132300 Sobic009G251700--Sobic007G132300 Sobic005G075700 Sobic005G075700 Sobic009G251700--Sobic005G075700 Sobic004G259800 Sobic004G259800 Sobic009G251700--Sobic004G259800 Sobic004G317401 Sobic004G317401 Sobic004G202900--Sobic004G317401 Sobic004G202900--Sobic004G341600 Sobic004G266100 Sobic004G266100 Sobic004G202900--Sobic004G266100 Sobic004G202900--Sobic003G363600 Sobic004G202900--Sobic006G232100 Sobic007G183500 Sobic007G183500 Sobic004G202900--Sobic007G183500 Sobic006G116200 Sobic006G116200 Sobic004G202900--Sobic006G116200 Sobic003G059600 Sobic003G059600 Sobic004G202900--Sobic003G059600 Sobic004G202900--Sobic002G321200 SobicK044402--Sobic007G055400 Sobic009G227650 Sobic009G227650 SobicK044402--Sobic009G227650 SobicK044402--Sobic005G227900 Sobic010G158601 Sobic010G158601 SobicK044402--Sobic010G158601 Sobic008G085600 Sobic008G085600 SobicK044402--Sobic008G085600 Sobic002G185400 Sobic002G185400 SobicK044402--Sobic002G185400 SobicK044402--Sobic003G363600 Sobic010G262650 Sobic010G262650 SobicK044402--Sobic010G262650 Sobic004G067850 Sobic004G067850 SobicK044402--Sobic004G067850 Sobic003G363600--Sobic004G202900 Sobic003G363600--SobicK044402 Sobic003G363600--Sobic005G227900 Sobic003G363600--Sobic004G317401 Sobic003G363600--Sobic002G373700 Sobic007G191400 Sobic007G191400 Sobic003G363600--Sobic007G191400 Sobic010G019600 Sobic010G019600 Sobic003G363600--Sobic010G019600 Sobic002G085200 Sobic002G085200 Sobic003G363600--Sobic002G085200 Sobic003G363600--Sobic004G341600
Octagon: transcription factors


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