Gene annotation
Transcriptome id Sobic.004G041600.1
Synonym Sb04g003610, HAT22
Functional annotation homeobox associated leucine zipper, putative, expressed
UniProt C5XUP4
Pfam PF02183 PF00046
Panther DB PTHR24326 PTHR24326:SF219
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT4G16780 : homeobox protein 2
RAP-DB (Rice) LOC_Os02g05640.1 : homeobox associated leucine zipper, putative, expressed
MaizeGDB (Corn) Zm00025a041464 , Zm00025a050084 , Zm00025a050086
Brachypodium PNT65887 , PNT76669 , KQJ97808 , KQJ93345
Barley HORVU7Hr1G018780.13 , HORVU7Hr1G018780.12 , HORVU7Hr1G018780.11 , HORVU7Hr1G018780.14 , HORVU5Hr1G067010.13 , HORVU5Hr1G067010.12 , HORVU5Hr1G067010.11 , HORVU5Hr1G067010.10 , HORVU5Hr1G067010.15 , HORVU5Hr1G067010.14 , HORVU1Hr1G055930.1 , HORVU1Hr1G055930.3 , HORVU1Hr1G055930.2 , HORVU1Hr1G055930.5 , HORVU1Hr1G055930.4 , HORVU1Hr1G055930.6 , HORVU2Hr1G097940.5 , HORVU2Hr1G097940.4 , HORVU2Hr1G097940.6 , HORVU2Hr1G097940.1 , HORVU2Hr1G097940.3 , HORVU2Hr1G097940.2 , HORVU2Hr1G097940.9 , HORVU2Hr1G097940.8 , HORVU5Hr1G067010.9 , HORVU5Hr1G067010.3 , HORVU5Hr1G067010.2 , HORVU5Hr1G067010.1 , HORVU5Hr1G067010.7 , HORVU5Hr1G067010.6 , HORVU5Hr1G067010.4 , HORVU7Hr1G018780.3 , HORVU7Hr1G018780.2 , HORVU7Hr1G018780.7 , HORVU7Hr1G018780.6 , HORVU7Hr1G018780.5 , HORVU7Hr1G018780.4 , HORVU7Hr1G018780.8 , HORVU2Hr1G097940.11 , HORVU2Hr1G097940.10
Wheat TraesCS1D02G220900 , TraesCS7A02G083800 , TraesCS2B02G434900 , TraesCS4A02G382300 , TraesCS7D02G078800 , TraesCS4A02G382200 , TraesCS4A02G382400 , TraesCS1B02G232700 , TraesCS1A02G219200 , TraesCS2A02G415900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G227900 STIGL3 - Stigma-specific Stig1 family protein precursor, putative, expressed -
2 Sobic.003G015700 endoglucanase precursor, putative, expressed -
3 Sobic.010G170150 - -
4 Sobic.007G151700 plant viral response family protein, putative, expressed -
5 Sobic.K044402 - -
6 Sobic.002G373700 expressed protein -
7 Sobic.003G363600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@transcription factor, putative, expressed K14431: transcription factor TGA
8 Sobic.008G014601 - -
9 Sobic.007G115600 protein kinase family protein, putative, expressed -
10 Sobic.001G492000 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@embryonic protein DC-8, putative, expressed -
11 Sobic.001G109000 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
12 Sobic.009G215700 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@late embryogenesis abundant protein, group 3, putative, expressed -
13 Sobic.002G185400 transporter-related, putative, expressed -
14 Sobic.004G137701 - -
15 Sobic.001G423900 - -
16 Sobic.001G075300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
17 Sobic.001G508300 cell division control protein 48 homolog E, putative, expressed K13525: VCP, transitional endoplasmic reticulum ATPase
18 Sobic.006G118500 OsFBDUF36 - F-box and DUF domain containing protein, expressed -
19 Sobic.008G076700 protein kinase, putative, expressed -
20 Sobic.003G059600 glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase


Gene co-expression network
sample Sobic004G041600 Sobic004G041600 Sobic005G227900 Sobic005G227900 Sobic004G041600--Sobic005G227900 Sobic003G015700 Sobic003G015700 Sobic004G041600--Sobic003G015700 Sobic010G170150 Sobic010G170150 Sobic004G041600--Sobic010G170150 Sobic007G151700 Sobic007G151700 Sobic004G041600--Sobic007G151700 SobicK044402 SobicK044402 Sobic004G041600--SobicK044402 Sobic002G373700 Sobic002G373700 Sobic004G041600--Sobic002G373700 Sobic003G363600 Sobic003G363600 Sobic004G041600--Sobic003G363600 Sobic008G014601 Sobic008G014601 Sobic004G041600--Sobic008G014601 Sobic007G115600 Sobic007G115600 Sobic004G041600--Sobic007G115600 Sobic005G227900--Sobic004G041600 Sobic005G227900--SobicK044402 Sobic005G227900--Sobic003G015700 Sobic005G227900--Sobic008G014601 Sobic007G055400 Sobic007G055400 Sobic005G227900--Sobic007G055400 Sobic005G227900--Sobic007G115600 Sobic001G423900 Sobic001G423900 Sobic005G227900--Sobic001G423900 Sobic007G176300 Sobic007G176300 Sobic005G227900--Sobic007G176300 Sobic002G342901 Sobic002G342901 Sobic005G227900--Sobic002G342901 Sobic003G015700--Sobic005G227900 Sobic003G015700--Sobic004G041600 Sobic004G341600 Sobic004G341600 Sobic003G015700--Sobic004G341600 Sobic002G321200 Sobic002G321200 Sobic003G015700--Sobic002G321200 Sobic009G215700 Sobic009G215700 Sobic003G015700--Sobic009G215700 Sobic009G251700 Sobic009G251700 Sobic003G015700--Sobic009G251700 Sobic004G202900 Sobic004G202900 Sobic003G015700--Sobic004G202900 Sobic003G015700--SobicK044402 Sobic003G015700--Sobic003G363600 Sobic001G075300 Sobic001G075300 Sobic010G170150--Sobic001G075300 Sobic010G082100 Sobic010G082100 Sobic010G170150--Sobic010G082100 Sobic008G076700 Sobic008G076700 Sobic010G170150--Sobic008G076700 Sobic009G150600 Sobic009G150600 Sobic010G170150--Sobic009G150600 Sobic001G349200 Sobic001G349200 Sobic010G170150--Sobic001G349200 Sobic001G348200 Sobic001G348200 Sobic010G170150--Sobic001G348200 Sobic001G396700 Sobic001G396700 Sobic010G170150--Sobic001G396700 Sobic010G170150--Sobic002G373700 Sobic006G209000 Sobic006G209000 Sobic010G170150--Sobic006G209000 Sobic007G151700--Sobic005G227900 Sobic007G151700--SobicK044402 Sobic007G151700--Sobic004G041600 Sobic007G151700--Sobic008G076700 Sobic007G151700--Sobic007G055400 Sobic002G185400 Sobic002G185400 Sobic007G151700--Sobic002G185400 Sobic007G151700--Sobic009G215700 Sobic007G151700--Sobic010G170150 Sobic008G085600 Sobic008G085600 Sobic007G151700--Sobic008G085600 SobicK044402--Sobic007G055400 Sobic009G227650 Sobic009G227650 SobicK044402--Sobic009G227650 SobicK044402--Sobic005G227900 Sobic010G158601 Sobic010G158601 SobicK044402--Sobic010G158601 SobicK044402--Sobic008G085600 SobicK044402--Sobic002G185400 SobicK044402--Sobic003G363600 Sobic010G262650 Sobic010G262650 SobicK044402--Sobic010G262650 Sobic004G067850 Sobic004G067850 SobicK044402--Sobic004G067850 Sobic007G191400 Sobic007G191400 Sobic002G373700--Sobic007G191400 Sobic003G124900 Sobic003G124900 Sobic002G373700--Sobic003G124900 Sobic002G373700--Sobic005G227900 Sobic004G317401 Sobic004G317401 Sobic002G373700--Sobic004G317401 Sobic002G373700--Sobic010G170150 Sobic002G373700--Sobic008G014601 Sobic002G342200 Sobic002G342200 Sobic002G373700--Sobic002G342200 Sobic002G373700--Sobic001G075300 Sobic001G492100 Sobic001G492100 Sobic002G373700--Sobic001G492100 Sobic003G363600--Sobic004G202900 Sobic003G363600--SobicK044402 Sobic003G363600--Sobic005G227900 Sobic003G363600--Sobic004G317401 Sobic003G363600--Sobic002G373700 Sobic003G363600--Sobic007G191400 Sobic010G019600 Sobic010G019600 Sobic003G363600--Sobic010G019600 Sobic002G085200 Sobic002G085200 Sobic003G363600--Sobic002G085200 Sobic003G363600--Sobic004G341600 Sobic006G130700 Sobic006G130700 Sobic008G014601--Sobic006G130700 Sobic003G380700 Sobic003G380700 Sobic008G014601--Sobic003G380700 Sobic009G025950 Sobic009G025950 Sobic008G014601--Sobic009G025950 Sobic008G014601--Sobic007G176300 Sobic009G240100 Sobic009G240100 Sobic008G014601--Sobic009G240100 Sobic003G146450 Sobic003G146450 Sobic008G014601--Sobic003G146450 Sobic002G247700 Sobic002G247700 Sobic008G014601--Sobic002G247700 Sobic008G014601--Sobic002G342901 Sobic008G014601--Sobic005G227900 Sobic001G403900 Sobic001G403900 Sobic007G115600--Sobic001G403900 Sobic008G154500 Sobic008G154500 Sobic007G115600--Sobic008G154500 Sobic006G281300 Sobic006G281300 Sobic007G115600--Sobic006G281300 Sobic006G223850 Sobic006G223850 Sobic007G115600--Sobic006G223850 Sobic010G083100 Sobic010G083100 Sobic007G115600--Sobic010G083100 Sobic006G107332 Sobic006G107332 Sobic007G115600--Sobic006G107332 Sobic010G129900 Sobic010G129900 Sobic007G115600--Sobic010G129900 Sobic007G115600--Sobic007G176300 Sobic002G221000 Sobic002G221000 Sobic007G115600--Sobic002G221000
Octagon: transcription factors


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