Gene annotation
| Transcriptome id | Sobic.001G057500.1 |
|---|---|
| Synonym | Sb01g005230 |
| Functional annotation | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543) basic proline-rich protein precursor, putative, expressed |
| UniProt | A0A1Z5S511 |
| Pfam | - |
| Panther DB | - |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | - |
|---|---|
| RAP-DB (Rice) | LOC_Os03g58180.1 : basic proline-rich protein precursor, putative, expressed |
| MaizeGDB (Corn) | Zm00025a008559 |
| Brachypodium | - |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.010G133000 | late embryogenesis abundant group 1, putative, expressed | - |
| 2 | Sobic.004G142500 | Up-reguralion under drought(PubMedID : 24916767)@late embryogenesis abundant protein D-34, putative, expressed | - |
| 3 | Sobic.001G510100 | - | - |
| 4 | Sobic.001G532501 | - | - |
| 5 | Sobic.003G130400 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@embryonic protein DC-8, putative, expressed | - |
| 6 | Sobic.001G497700 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@late embryogenesis abundant protein D-34, putative, expressed | - |
| 7 | Sobic.009G104600 | small hydrophilic plant seed protein, putative, expressed | - |
| 8 | Sobic.005G165850 | - | - |
| 9 | Sobic.010G007800 | Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@late embryogenesis abundant group 1, putative, expressed | - |
| 10 | Sobic.010G041900 | Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@dehydrin, putative, expressed | - |
| 11 | Sobic.007G191300 | serine/threonine-protein kinase NAK, putative, expressed | K04733: interleukin-1 receptor-associated kinase 4 |
| 12 | Sobic.001G366600 | OsFBX51 - F-box domain containing protein, expressed | - |
| 13 | Sobic.003G061500 | small hydrophilic plant seed protein, putative, expressed | - |
| 14 | Sobic.001G144900 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@cupin domain containing protein, expressed | - |
| 15 | Sobic.002G383500 | expressed protein | - |
| 16 | Sobic.002G185100 | succinate dehydrogenase and fumarate reductase iron-sulfur protein, expressed | K00235: SDHB, succinate dehydrogenase (ubiquinone) iron-sulfur subunit |
| 17 | Sobic.002G143300 | Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein | - |
| 18 | Sobic.002G413200 | glucosyltransferase, putative, expressed | - |
| 19 | Sobic.009G104500 | small hydrophilic plant seed protein, putative, expressed | - |
| 20 | Sobic.001G044300 | transcription factor, putative, expressed | K09060: plant G-box-binding factor |
Gene co-expression network
Octagon: transcription factors
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