Gene annotation
Transcriptome id Sobic.001G532501.1
Synonym -
Functional annotation -
UniProt A0A1Z5SBS2
Pfam PF00106
Panther DB PTHR24320 PTHR24320:SF81
NCBI CDD KOG1208; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT4G24050 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os03g02460.1 : retinol dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a000223 , Zm00025a050193
Brachypodium KQK23278
Barley HORVU7Hr1G011180.8 , HORVU7Hr1G011180.9 , HORVU7Hr1G011180.2 , HORVU7Hr1G011180.3 , HORVU7Hr1G011180.6 , HORVU7Hr1G011180.7 , HORVU7Hr1G011180.12 , HORVU7Hr1G011180.10 , HORVU7Hr1G011180.11 , HORVU7Hr1G011180.13 , HORVU4Hr1G086380.5 , HORVU4Hr1G086380.4 , HORVU4Hr1G086380.3 , HORVU4Hr1G086380.2 , HORVU4Hr1G086380.1
Wheat TraesCS4B02G358300 , TraesCS4D02G003400 , TraesCS4D02G003400 , TraesCS4B02G358400 , TraesCS4D02G351700 , TraesCS5A02G527300 , TraesCS5A02G527400 , TraesCS4D02G351800 , TraesCS4A02G428800 , TraesCS4B02G358500 , TraesCS7D02G055800 , TraesCS4B02G358200 , TraesCS7A02G061000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G510100 - -
2 Sobic.007G191300 serine/threonine-protein kinase NAK, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
3 Sobic.010G082400 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
4 Sobic.005G165850 - -
5 Sobic.010G215100 AP2/EREBP transcription factor BABY BOOM, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
6 Sobic.002G232900 helix-loop-helix DNA-binding protein, putative, expressed -
7 Sobic.004G264200 helix-loop-helix DNA-binding domain containing protein, expressed -
8 Sobic.002G241700 phosphatidylinositol transfer, putative, expressed -
9 Sobic.003G400400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cysteine proteinase inhibitor precursor protein, putative, expressed -
10 Sobic.006G093500 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
11 Sobic.006G143600 similar to OSIGBa0157K09-H0214G12.13 protein(PubMedID : 29862293)@caleosin related protein, putative, expressed K17991: peroxygenase
12 Sobic.007G162700 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
13 Sobic.001G057500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@basic proline-rich protein precursor, putative, expressed -
14 Sobic.009G250500 expressed protein -
15 Sobic.006G107900 uncharacterized Cys-rich domain containing protein, putative, expressed -
16 Sobic.002G391100 Thioredoxin peroxidase (Os)(PubMedID : 27208977)@peroxiredoxin, putative, expressed K11188: peroxiredoxin 6
17 Sobic.003G283700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@DUF1264 domain containing protein, putative, expressed -
18 Sobic.003G098800 osMFT2 MFT-Like2 homologous to Mother of FT and TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
19 Sobic.001G017500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed -
20 Sobic.003G419500 xylanase inhibitor, putative, expressed -


Gene co-expression network
sample Sobic001G532501 Sobic001G532501 Sobic001G510100 Sobic001G510100 Sobic001G532501--Sobic001G510100 Sobic007G191300 Sobic007G191300 Sobic001G532501--Sobic007G191300 Sobic010G082400 Sobic010G082400 Sobic001G532501--Sobic010G082400 Sobic005G165850 Sobic005G165850 Sobic001G532501--Sobic005G165850 Sobic010G215100 Sobic010G215100 Sobic001G532501--Sobic010G215100 Sobic002G232900 Sobic002G232900 Sobic001G532501--Sobic002G232900 Sobic004G264200 Sobic004G264200 Sobic001G532501--Sobic004G264200 Sobic002G241700 Sobic002G241700 Sobic001G532501--Sobic002G241700 Sobic003G400400 Sobic003G400400 Sobic001G532501--Sobic003G400400 Sobic002G391100 Sobic002G391100 Sobic001G510100--Sobic002G391100 Sobic003G236200 Sobic003G236200 Sobic001G510100--Sobic003G236200 Sobic003G098800 Sobic003G098800 Sobic001G510100--Sobic003G098800 Sobic003G283700 Sobic003G283700 Sobic001G510100--Sobic003G283700 Sobic003G295600 Sobic003G295600 Sobic001G510100--Sobic003G295600 Sobic003G437400 Sobic003G437400 Sobic001G510100--Sobic003G437400 Sobic001G017500 Sobic001G017500 Sobic001G510100--Sobic001G017500 Sobic004G301800 Sobic004G301800 Sobic001G510100--Sobic004G301800 Sobic001G380800 Sobic001G380800 Sobic001G510100--Sobic001G380800 Sobic007G191300--Sobic002G241700 Sobic007G191300--Sobic010G082400 Sobic002G144600 Sobic002G144600 Sobic007G191300--Sobic002G144600 Sobic007G191300--Sobic005G165850 Sobic007G191300--Sobic001G532501 Sobic001G366600 Sobic001G366600 Sobic007G191300--Sobic001G366600 Sobic007G076600 Sobic007G076600 Sobic007G191300--Sobic007G076600 Sobic007G191300--Sobic002G232900 Sobic005G196600 Sobic005G196600 Sobic007G191300--Sobic005G196600 Sobic010G082400--Sobic005G165850 Sobic003G098650 Sobic003G098650 Sobic010G082400--Sobic003G098650 Sobic010G082400--Sobic007G191300 Sobic010G082400--Sobic001G366600 Sobic008G046100 Sobic008G046100 Sobic010G082400--Sobic008G046100 Sobic010G082400--Sobic007G076600 Sobic008G014900 Sobic008G014900 Sobic010G082400--Sobic008G014900 Sobic010G180350 Sobic010G180350 Sobic010G082400--Sobic010G180350 Sobic010G082400--Sobic001G532501 Sobic005G165850--Sobic010G082400 Sobic005G165850--Sobic007G076600 Sobic006G076100 Sobic006G076100 Sobic005G165850--Sobic006G076100 Sobic005G165850--Sobic001G366600 Sobic005G165850--Sobic003G098650 Sobic010G111450 Sobic010G111450 Sobic005G165850--Sobic010G111450 Sobic002G040201 Sobic002G040201 Sobic005G165850--Sobic002G040201 Sobic001G463600 Sobic001G463600 Sobic005G165850--Sobic001G463600 Sobic002G394466 Sobic002G394466 Sobic005G165850--Sobic002G394466 Sobic010G215100--Sobic001G532501 Sobic002G384100 Sobic002G384100 Sobic010G215100--Sobic002G384100 Sobic010G215100--Sobic010G082400 Sobic010G215100--Sobic002G241700 Sobic003G292100 Sobic003G292100 Sobic010G215100--Sobic003G292100 Sobic002G368800 Sobic002G368800 Sobic010G215100--Sobic002G368800 Sobic005G041100 Sobic005G041100 Sobic010G215100--Sobic005G041100 Sobic010G215100--Sobic007G191300 Sobic010G215100--Sobic004G264200 Sobic009G208600 Sobic009G208600 Sobic002G232900--Sobic009G208600 Sobic006G013300 Sobic006G013300 Sobic002G232900--Sobic006G013300 Sobic005G021000 Sobic005G021000 Sobic002G232900--Sobic005G021000 Sobic001G254800 Sobic001G254800 Sobic002G232900--Sobic001G254800 Sobic003G419500 Sobic003G419500 Sobic002G232900--Sobic003G419500 Sobic004G347500 Sobic004G347500 Sobic002G232900--Sobic004G347500 Sobic004G029900 Sobic004G029900 Sobic002G232900--Sobic004G029900 Sobic002G240000 Sobic002G240000 Sobic002G232900--Sobic002G240000 Sobic005G105600 Sobic005G105600 Sobic002G232900--Sobic005G105600 Sobic006G124200 Sobic006G124200 Sobic004G264200--Sobic006G124200 Sobic004G264200--Sobic002G232900 Sobic004G264200--Sobic005G105600 Sobic003G019400 Sobic003G019400 Sobic004G264200--Sobic003G019400 Sobic004G264200--Sobic009G208600 Sobic004G264200--Sobic006G013300 Sobic001G197800 Sobic001G197800 Sobic004G264200--Sobic001G197800 Sobic006G073800 Sobic006G073800 Sobic004G264200--Sobic006G073800 Sobic004G214300 Sobic004G214300 Sobic004G264200--Sobic004G214300 Sobic009G133100 Sobic009G133100 Sobic002G241700--Sobic009G133100 Sobic002G241700--Sobic007G191300 Sobic002G319700 Sobic002G319700 Sobic002G241700--Sobic002G319700 Sobic006G069400 Sobic006G069400 Sobic002G241700--Sobic006G069400 Sobic004G233900 Sobic004G233900 Sobic002G241700--Sobic004G233900 Sobic004G101100 Sobic004G101100 Sobic002G241700--Sobic004G101100 Sobic004G072400 Sobic004G072400 Sobic002G241700--Sobic004G072400 Sobic003G212800 Sobic003G212800 Sobic002G241700--Sobic003G212800 Sobic002G241700--Sobic008G014900 Sobic003G400400--Sobic002G391100 Sobic006G107900 Sobic006G107900 Sobic003G400400--Sobic006G107900 Sobic003G400400--Sobic003G283700 Sobic006G143600 Sobic006G143600 Sobic003G400400--Sobic006G143600 Sobic003G400400--Sobic003G098800 Sobic003G400400--Sobic001G017500 Sobic003G400400--Sobic003G295600 Sobic010G131500 Sobic010G131500 Sobic003G400400--Sobic010G131500 Sobic003G400400--Sobic003G236200
Octagon: transcription factors


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