Gene annotation
Transcriptome id Sobic.010G215100.2
Synonym CHO1, AIL5, EMK, Sb10g026150
Functional annotation AP2/EREBP transcription factor BABY BOOM, putative, expressed
UniProt C5Z785
Pfam PF00847
Panther DB PTHR32467 PTHR32467:SF13
NCBI CDD -
KEGG Orthology K09285; OVM, AP2-like factor, ANT lineage
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity GO:0007275multicellular organism development


Orthologs (automatic annotation)
TAIR AT5G57390 : AINTEGUMENTA-like 5
RAP-DB (Rice) LOC_Os04g55970.2 : AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed
MaizeGDB (Corn) Zm00025a044949 , Zm00025a021173 , Zm00025a051698 , Zm00025a000885 , Zm00025a026413
Brachypodium PNT73386 , KQK16904
Barley HORVU7Hr1G111060.6 , HORVU7Hr1G111060.7 , HORVU7Hr1G111060.4 , HORVU7Hr1G111060.5 , HORVU7Hr1G111060.2 , HORVU7Hr1G111060.1 , HORVU7Hr1G111060.8 , HORVU7Hr1G111060.9 , HORVU7Hr1G111060.3 , HORVU4Hr1G076200.5 , HORVU4Hr1G076200.4 , HORVU4Hr1G076200.7 , HORVU4Hr1G076200.6 , HORVU4Hr1G076200.1 , HORVU4Hr1G076200.3 , HORVU4Hr1G076200.2
Wheat TraesCS7A02G495800 , TraesCS4B02G292900 , TraesCS7D02G483200 , TraesCS7D02G483200 , TraesCS7B02G401400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G532501 - -
2 Sobic.002G384100 expressed protein -
3 Sobic.010G082400 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
4 Sobic.002G241700 phosphatidylinositol transfer, putative, expressed -
5 Sobic.003G292100 pectinesterase, putative, expressed K01051: pectinesterase
6 Sobic.002G368800 expressed protein -
7 Sobic.005G041100 bZIP transcription factor domain containing protein, expressed -
8 Sobic.007G191300 serine/threonine-protein kinase NAK, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
9 Sobic.004G264200 helix-loop-helix DNA-binding domain containing protein, expressed -
10 Sobic.005G165850 - -
11 Sobic.004G077200 expressed protein -
12 Sobic.006G210900 protein kinase domain containing protein, expressed -
13 Sobic.002G232900 helix-loop-helix DNA-binding protein, putative, expressed -
14 Sobic.008G005700 - -
15 Sobic.004G029900 "transporter for metal ion into cytoplasm, an influx transporter for Al"(PubMedID : 28716414)@metal transporter Nramp6, putative, expressed -
16 Sobic.001G510100 - -
17 Sobic.001G151200 anthranilate phosphoribosyltransferase, putative, expressed -
18 Sobic.003G419500 xylanase inhibitor, putative, expressed -
19 Sobic.009G208600 POEI52 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
20 Sobic.006G013300 receptor-like protein kinase 2 precursor, putative, expressed -


Gene co-expression network
sample Sobic010G215100 Sobic010G215100 Sobic001G532501 Sobic001G532501 Sobic010G215100--Sobic001G532501 Sobic002G384100 Sobic002G384100 Sobic010G215100--Sobic002G384100 Sobic010G082400 Sobic010G082400 Sobic010G215100--Sobic010G082400 Sobic002G241700 Sobic002G241700 Sobic010G215100--Sobic002G241700 Sobic003G292100 Sobic003G292100 Sobic010G215100--Sobic003G292100 Sobic002G368800 Sobic002G368800 Sobic010G215100--Sobic002G368800 Sobic005G041100 Sobic005G041100 Sobic010G215100--Sobic005G041100 Sobic007G191300 Sobic007G191300 Sobic010G215100--Sobic007G191300 Sobic004G264200 Sobic004G264200 Sobic010G215100--Sobic004G264200 Sobic001G510100 Sobic001G510100 Sobic001G532501--Sobic001G510100 Sobic001G532501--Sobic007G191300 Sobic001G532501--Sobic010G082400 Sobic005G165850 Sobic005G165850 Sobic001G532501--Sobic005G165850 Sobic001G532501--Sobic010G215100 Sobic002G232900 Sobic002G232900 Sobic001G532501--Sobic002G232900 Sobic001G532501--Sobic004G264200 Sobic001G532501--Sobic002G241700 Sobic003G400400 Sobic003G400400 Sobic001G532501--Sobic003G400400 Sobic004G281600 Sobic004G281600 Sobic002G384100--Sobic004G281600 Sobic002G384100--Sobic010G215100 Sobic006G050600 Sobic006G050600 Sobic002G384100--Sobic006G050600 Sobic004G243300 Sobic004G243300 Sobic002G384100--Sobic004G243300 Sobic001G354800 Sobic001G354800 Sobic002G384100--Sobic001G354800 Sobic005G138500 Sobic005G138500 Sobic002G384100--Sobic005G138500 Sobic006G269501 Sobic006G269501 Sobic002G384100--Sobic006G269501 Sobic003G011000 Sobic003G011000 Sobic002G384100--Sobic003G011000 Sobic001G307000 Sobic001G307000 Sobic002G384100--Sobic001G307000 Sobic010G082400--Sobic005G165850 Sobic003G098650 Sobic003G098650 Sobic010G082400--Sobic003G098650 Sobic010G082400--Sobic007G191300 Sobic001G366600 Sobic001G366600 Sobic010G082400--Sobic001G366600 Sobic008G046100 Sobic008G046100 Sobic010G082400--Sobic008G046100 Sobic007G076600 Sobic007G076600 Sobic010G082400--Sobic007G076600 Sobic008G014900 Sobic008G014900 Sobic010G082400--Sobic008G014900 Sobic010G180350 Sobic010G180350 Sobic010G082400--Sobic010G180350 Sobic010G082400--Sobic001G532501 Sobic009G133100 Sobic009G133100 Sobic002G241700--Sobic009G133100 Sobic002G241700--Sobic007G191300 Sobic002G319700 Sobic002G319700 Sobic002G241700--Sobic002G319700 Sobic006G069400 Sobic006G069400 Sobic002G241700--Sobic006G069400 Sobic004G233900 Sobic004G233900 Sobic002G241700--Sobic004G233900 Sobic004G101100 Sobic004G101100 Sobic002G241700--Sobic004G101100 Sobic004G072400 Sobic004G072400 Sobic002G241700--Sobic004G072400 Sobic003G212800 Sobic003G212800 Sobic002G241700--Sobic003G212800 Sobic002G241700--Sobic008G014900 Sobic002G327600 Sobic002G327600 Sobic003G292100--Sobic002G327600 Sobic001G254800 Sobic001G254800 Sobic003G292100--Sobic001G254800 Sobic001G534200 Sobic001G534200 Sobic003G292100--Sobic001G534200 Sobic005G021000 Sobic005G021000 Sobic003G292100--Sobic005G021000 Sobic010G198900 Sobic010G198900 Sobic003G292100--Sobic010G198900 Sobic009G025500 Sobic009G025500 Sobic003G292100--Sobic009G025500 Sobic002G240000 Sobic002G240000 Sobic003G292100--Sobic002G240000 Sobic006G167700 Sobic006G167700 Sobic003G292100--Sobic006G167700 Sobic009G103800 Sobic009G103800 Sobic003G292100--Sobic009G103800 Sobic003G226100 Sobic003G226100 Sobic002G368800--Sobic003G226100 Sobic009G204800 Sobic009G204800 Sobic002G368800--Sobic009G204800 Sobic001G151200 Sobic001G151200 Sobic002G368800--Sobic001G151200 Sobic004G153700 Sobic004G153700 Sobic002G368800--Sobic004G153700 Sobic010G194500 Sobic010G194500 Sobic002G368800--Sobic010G194500 Sobic003G083700 Sobic003G083700 Sobic002G368800--Sobic003G083700 Sobic001G008400 Sobic001G008400 Sobic002G368800--Sobic001G008400 Sobic001G189500 Sobic001G189500 Sobic002G368800--Sobic001G189500 Sobic002G070800 Sobic002G070800 Sobic002G368800--Sobic002G070800 Sobic002G078850 Sobic002G078850 Sobic005G041100--Sobic002G078850 Sobic001G523500 Sobic001G523500 Sobic005G041100--Sobic001G523500 Sobic004G233500 Sobic004G233500 Sobic005G041100--Sobic004G233500 Sobic001G179680 Sobic001G179680 Sobic005G041100--Sobic001G179680 Sobic002G356300 Sobic002G356300 Sobic005G041100--Sobic002G356300 Sobic001G354900 Sobic001G354900 Sobic005G041100--Sobic001G354900 Sobic004G221150 Sobic004G221150 Sobic005G041100--Sobic004G221150 Sobic004G107400 Sobic004G107400 Sobic005G041100--Sobic004G107400 Sobic004G063750 Sobic004G063750 Sobic005G041100--Sobic004G063750 Sobic007G191300--Sobic002G241700 Sobic007G191300--Sobic010G082400 Sobic002G144600 Sobic002G144600 Sobic007G191300--Sobic002G144600 Sobic007G191300--Sobic005G165850 Sobic007G191300--Sobic001G532501 Sobic007G191300--Sobic001G366600 Sobic007G191300--Sobic007G076600 Sobic007G191300--Sobic002G232900 Sobic005G196600 Sobic005G196600 Sobic007G191300--Sobic005G196600 Sobic006G124200 Sobic006G124200 Sobic004G264200--Sobic006G124200 Sobic004G264200--Sobic002G232900 Sobic005G105600 Sobic005G105600 Sobic004G264200--Sobic005G105600 Sobic003G019400 Sobic003G019400 Sobic004G264200--Sobic003G019400 Sobic009G208600 Sobic009G208600 Sobic004G264200--Sobic009G208600 Sobic006G013300 Sobic006G013300 Sobic004G264200--Sobic006G013300 Sobic001G197800 Sobic001G197800 Sobic004G264200--Sobic001G197800 Sobic006G073800 Sobic006G073800 Sobic004G264200--Sobic006G073800 Sobic004G214300 Sobic004G214300 Sobic004G264200--Sobic004G214300
Octagon: transcription factors


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