Gene annotation
Transcriptome id Sobic.003G236551.1
Synonym -
Functional annotation -
UniProt A0A1W0VYM3
Pfam -
Panther DB PTHR34673
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G03341 : -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium KQK08950
Barley -
Wheat TraesCSU02G073800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G271800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under drought(PubMedID : 24916767)@late embryogenesis abundant protein, group 3, putative, expressed -
2 Sobic.001G404300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@RPGR, putative, expressed -
3 Sobic.002G413200 glucosyltransferase, putative, expressed -
4 Sobic.001G396900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under drought(PubMedID : 24916767)@mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
5 Sobic.002G073100 - -
6 Sobic.007G109800 Up-reguralion under drought(PubMedID : 24916767)@late embryogenesis abundant protein D-34, putative, expressed -
7 Sobic.009G171400 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
8 Sobic.006G034300 Transketolase(PubMedID : 26186930)@"Transketolase, putative (Os)"(PubMedID : 27208977)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@transketolase, chloroplast precursor, putative, expressed K00615: E2.2.1.1, tktA, transketolase
9 Sobic.004G114600 expressed protein -
10 Sobic.006G114700 Up-reguralion under drought(PubMedID : 24916767)@phosphofructokinase 2("PubMedID : 26759170,PubMedID : 24597475")@phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
11 Sobic.003G292400 NADP-dependent malic enzyme(PubMedID : 26186930)@NADP-malic enzyme(PubMedID : 26904072)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@C4 carbon fixation(PubMedID : 28620409)@NADP-dependent malic enzyme, putative, expressed K00029: E1.1.1.40, malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)
12 Sobic.003G011000 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@AAA-type ATPase family protein, putative, expressed -
13 Sobic.005G138500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.004G142500 Up-reguralion under drought(PubMedID : 24916767)@late embryogenesis abundant protein D-34, putative, expressed -
15 Sobic.010G024600 aminomethyltransferase, putative, expressed K06980: tRNA-modifying protein YgfZ
16 Sobic.004G047900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed -
17 Sobic.010G101300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@dehydrogenase E1 component domain containing protein, expressed K00161: PDHA, pyruvate dehydrogenase E1 component alpha subunit
18 Sobic.007G153600 similar to Protein HVA22(PubMedID : 29862293)@HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
19 Sobic.006G050600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.008G114800 - -


Gene co-expression network
sample Sobic003G236551 Sobic003G236551 Sobic003G271800 Sobic003G271800 Sobic003G236551--Sobic003G271800 Sobic001G404300 Sobic001G404300 Sobic003G236551--Sobic001G404300 Sobic002G413200 Sobic002G413200 Sobic003G236551--Sobic002G413200 Sobic001G396900 Sobic001G396900 Sobic003G236551--Sobic001G396900 Sobic002G073100 Sobic002G073100 Sobic003G236551--Sobic002G073100 Sobic007G109800 Sobic007G109800 Sobic003G236551--Sobic007G109800 Sobic009G171400 Sobic009G171400 Sobic003G236551--Sobic009G171400 Sobic006G034300 Sobic006G034300 Sobic003G236551--Sobic006G034300 Sobic004G114600 Sobic004G114600 Sobic003G236551--Sobic004G114600 Sobic003G271800--Sobic003G236551 Sobic010G133000 Sobic010G133000 Sobic003G271800--Sobic010G133000 Sobic004G142500 Sobic004G142500 Sobic003G271800--Sobic004G142500 Sobic010G041900 Sobic010G041900 Sobic003G271800--Sobic010G041900 Sobic003G271800--Sobic001G404300 Sobic003G271800--Sobic001G396900 Sobic003G271800--Sobic002G413200 Sobic003G130400 Sobic003G130400 Sobic003G271800--Sobic003G130400 Sobic005G138500 Sobic005G138500 Sobic003G271800--Sobic005G138500 Sobic001G404300--Sobic003G271800 Sobic001G404300--Sobic003G236551 Sobic001G460100 Sobic001G460100 Sobic001G404300--Sobic001G460100 Sobic010G024600 Sobic010G024600 Sobic001G404300--Sobic010G024600 Sobic001G112500 Sobic001G112500 Sobic001G404300--Sobic001G112500 Sobic009G052600 Sobic009G052600 Sobic001G404300--Sobic009G052600 Sobic007G153600 Sobic007G153600 Sobic001G404300--Sobic007G153600 Sobic004G347500 Sobic004G347500 Sobic001G404300--Sobic004G347500 Sobic010G177100 Sobic010G177100 Sobic001G404300--Sobic010G177100 Sobic002G413200--Sobic007G153600 Sobic002G413200--Sobic004G114600 Sobic002G143300 Sobic002G143300 Sobic002G413200--Sobic002G143300 Sobic002G062100 Sobic002G062100 Sobic002G413200--Sobic002G062100 Sobic002G413200--Sobic010G133000 Sobic006G208000 Sobic006G208000 Sobic002G413200--Sobic006G208000 Sobic009G025500 Sobic009G025500 Sobic002G413200--Sobic009G025500 Sobic001G044300 Sobic001G044300 Sobic002G413200--Sobic001G044300 Sobic010G007800 Sobic010G007800 Sobic002G413200--Sobic010G007800 Sobic001G396900--Sobic005G138500 Sobic001G396900--Sobic004G114600 Sobic001G396900--Sobic006G034300 Sobic005G165800 Sobic005G165800 Sobic001G396900--Sobic005G165800 Sobic001G396900--Sobic009G171400 Sobic001G396900--Sobic002G413200 Sobic003G011000 Sobic003G011000 Sobic001G396900--Sobic003G011000 Sobic006G050600 Sobic006G050600 Sobic001G396900--Sobic006G050600 Sobic001G396900--Sobic007G153600 Sobic002G073100--Sobic003G236551 Sobic002G073100--Sobic004G114600 Sobic002G073100--Sobic009G171400 Sobic002G073100--Sobic002G413200 Sobic006G013300 Sobic006G013300 Sobic002G073100--Sobic006G013300 Sobic002G073100--Sobic006G034300 Sobic002G073100--Sobic010G024600 Sobic001G508200 Sobic001G508200 Sobic002G073100--Sobic001G508200 Sobic002G073100--Sobic001G396900 Sobic005G062500 Sobic005G062500 Sobic007G109800--Sobic005G062500 Sobic009G116700 Sobic009G116700 Sobic007G109800--Sobic009G116700 Sobic002G141800 Sobic002G141800 Sobic007G109800--Sobic002G141800 Sobic003G244100 Sobic003G244100 Sobic007G109800--Sobic003G244100 Sobic001G200700 Sobic001G200700 Sobic007G109800--Sobic001G200700 Sobic003G011400 Sobic003G011400 Sobic007G109800--Sobic003G011400 Sobic004G139100 Sobic004G139100 Sobic007G109800--Sobic004G139100 Sobic001G381700 Sobic001G381700 Sobic007G109800--Sobic001G381700 Sobic009G046200 Sobic009G046200 Sobic007G109800--Sobic009G046200 Sobic010G101300 Sobic010G101300 Sobic009G171400--Sobic010G101300 Sobic009G171400--Sobic004G114600 Sobic009G171400--Sobic005G138500 Sobic009G171400--Sobic001G396900 Sobic003G292400 Sobic003G292400 Sobic009G171400--Sobic003G292400 Sobic004G243300 Sobic004G243300 Sobic009G171400--Sobic004G243300 Sobic009G171400--Sobic006G034300 Sobic006G114700 Sobic006G114700 Sobic009G171400--Sobic006G114700 Sobic009G171400--Sobic003G011000 Sobic006G034300--Sobic003G011000 Sobic006G034300--Sobic001G396900 Sobic006G034300--Sobic004G114600 Sobic006G034300--Sobic005G165800 Sobic006G034300--Sobic009G171400 Sobic006G034300--Sobic005G138500 Sobic006G034300--Sobic002G413200 Sobic006G034300--Sobic006G050600 Sobic006G034300--Sobic006G208000 Sobic004G114600--Sobic002G413200 Sobic004G114600--Sobic001G396900 Sobic004G114600--Sobic006G208000 Sobic004G114600--Sobic009G171400 Sobic004G114600--Sobic006G034300 Sobic004G114600--Sobic002G062100 Sobic004G114600--Sobic009G025500 Sobic004G114600--Sobic006G050600 Sobic004G114600--Sobic005G165800
Octagon: transcription factors


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