Gene annotation
Transcriptome id Sobic.001G404300.1
Synonym Sb01g038245
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
RPGR, putative, expressed
UniProt A0A1B6QNS1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g18490.1 : RPGR, putative, expressed
MaizeGDB (Corn) Zm00025a002026 , Zm00025a024381
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G271800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under drought(PubMedID : 24916767)@late embryogenesis abundant protein, group 3, putative, expressed -
2 Sobic.003G236551 - -
3 Sobic.001G460100 heparanase-like protein precursor, putative, expressed K07964: heparanase
4 Sobic.010G024600 aminomethyltransferase, putative, expressed K06980: tRNA-modifying protein YgfZ
5 Sobic.001G112500 ZF-HD protein dimerisation region containing protein, expressed -
6 Sobic.009G052600 universal stress protein domain containing protein, putative, expressed -
7 Sobic.007G153600 similar to Protein HVA22(PubMedID : 29862293)@HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
8 Sobic.004G347500 2-phosphoglycerate kinase-related, putative, expressed -
9 Sobic.010G177100 expressed protein -
10 Sobic.003G098300 hydroxyproline-rich glycoprotein family protein, putative, expressed -
11 Sobic.001G044300 transcription factor, putative, expressed K09060: plant G-box-binding factor
12 Sobic.001G336200 "Grain Length3.2(Ortholog in rice:Adamski et al., 2009(PubMedID : 31659842)@cytochrome P450, putative, expressed -
13 Sobic.002G256900 acyl-ACP thioesterase, putative, expressed K10782: fatty acyl-ACP thioesterase A
14 Sobic.003G350400 thaumatin, putative, expressed -
15 Sobic.009G230000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@transcription factor HBP-1b, putative, expressed -
16 Sobic.004G311600 lysM domain-containing GPI-anchored protein precursor, putative, expressed -
17 Sobic.001G381000 - -
18 Sobic.007G168100 peptidyl-prolyl cis-trans isomerase, putative, expressed -
19 Sobic.003G419500 xylanase inhibitor, putative, expressed -
20 Sobic.009G012600 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1


Gene co-expression network
sample Sobic001G404300 Sobic001G404300 Sobic003G271800 Sobic003G271800 Sobic001G404300--Sobic003G271800 Sobic003G236551 Sobic003G236551 Sobic001G404300--Sobic003G236551 Sobic001G460100 Sobic001G460100 Sobic001G404300--Sobic001G460100 Sobic010G024600 Sobic010G024600 Sobic001G404300--Sobic010G024600 Sobic001G112500 Sobic001G112500 Sobic001G404300--Sobic001G112500 Sobic009G052600 Sobic009G052600 Sobic001G404300--Sobic009G052600 Sobic007G153600 Sobic007G153600 Sobic001G404300--Sobic007G153600 Sobic004G347500 Sobic004G347500 Sobic001G404300--Sobic004G347500 Sobic010G177100 Sobic010G177100 Sobic001G404300--Sobic010G177100 Sobic003G271800--Sobic003G236551 Sobic010G133000 Sobic010G133000 Sobic003G271800--Sobic010G133000 Sobic004G142500 Sobic004G142500 Sobic003G271800--Sobic004G142500 Sobic010G041900 Sobic010G041900 Sobic003G271800--Sobic010G041900 Sobic003G271800--Sobic001G404300 Sobic001G396900 Sobic001G396900 Sobic003G271800--Sobic001G396900 Sobic002G413200 Sobic002G413200 Sobic003G271800--Sobic002G413200 Sobic003G130400 Sobic003G130400 Sobic003G271800--Sobic003G130400 Sobic005G138500 Sobic005G138500 Sobic003G271800--Sobic005G138500 Sobic003G236551--Sobic003G271800 Sobic003G236551--Sobic001G404300 Sobic003G236551--Sobic002G413200 Sobic003G236551--Sobic001G396900 Sobic002G073100 Sobic002G073100 Sobic003G236551--Sobic002G073100 Sobic007G109800 Sobic007G109800 Sobic003G236551--Sobic007G109800 Sobic009G171400 Sobic009G171400 Sobic003G236551--Sobic009G171400 Sobic006G034300 Sobic006G034300 Sobic003G236551--Sobic006G034300 Sobic004G114600 Sobic004G114600 Sobic003G236551--Sobic004G114600 Sobic001G460100--Sobic010G177100 Sobic009G188900 Sobic009G188900 Sobic001G460100--Sobic009G188900 Sobic009G113900 Sobic009G113900 Sobic001G460100--Sobic009G113900 Sobic003G084200 Sobic003G084200 Sobic001G460100--Sobic003G084200 Sobic009G012600 Sobic009G012600 Sobic001G460100--Sobic009G012600 Sobic003G024000 Sobic003G024000 Sobic001G460100--Sobic003G024000 Sobic007G050800 Sobic007G050800 Sobic001G460100--Sobic007G050800 Sobic006G275500 Sobic006G275500 Sobic001G460100--Sobic006G275500 Sobic003G102700 Sobic003G102700 Sobic001G460100--Sobic003G102700 Sobic002G266300 Sobic002G266300 Sobic010G024600--Sobic002G266300 Sobic006G208000 Sobic006G208000 Sobic010G024600--Sobic006G208000 Sobic001G508200 Sobic001G508200 Sobic010G024600--Sobic001G508200 Sobic005G021000 Sobic005G021000 Sobic010G024600--Sobic005G021000 Sobic010G024600--Sobic004G347500 Sobic001G004600 Sobic001G004600 Sobic010G024600--Sobic001G004600 Sobic004G291200 Sobic004G291200 Sobic010G024600--Sobic004G291200 Sobic009G025500 Sobic009G025500 Sobic010G024600--Sobic009G025500 Sobic001G044300 Sobic001G044300 Sobic010G024600--Sobic001G044300 Sobic002G232900 Sobic002G232900 Sobic001G112500--Sobic002G232900 Sobic001G112500--Sobic004G347500 Sobic002G256900 Sobic002G256900 Sobic001G112500--Sobic002G256900 Sobic001G336200 Sobic001G336200 Sobic001G112500--Sobic001G336200 Sobic006G013300 Sobic006G013300 Sobic001G112500--Sobic006G013300 Sobic001G112500--Sobic007G153600 Sobic002G265200 Sobic002G265200 Sobic001G112500--Sobic002G265200 Sobic009G208600 Sobic009G208600 Sobic001G112500--Sobic009G208600 Sobic003G350400 Sobic003G350400 Sobic001G112500--Sobic003G350400 Sobic009G052600--Sobic004G347500 Sobic009G052600--Sobic010G024600 Sobic003G098300 Sobic003G098300 Sobic009G052600--Sobic003G098300 Sobic001G386600 Sobic001G386600 Sobic009G052600--Sobic001G386600 Sobic009G052600--Sobic005G021000 Sobic007G053100 Sobic007G053100 Sobic009G052600--Sobic007G053100 Sobic001G261420 Sobic001G261420 Sobic009G052600--Sobic001G261420 Sobic002G177600 Sobic002G177600 Sobic009G052600--Sobic002G177600 Sobic003G011800 Sobic003G011800 Sobic009G052600--Sobic003G011800 Sobic007G153600--Sobic002G413200 Sobic010G007800 Sobic010G007800 Sobic007G153600--Sobic010G007800 Sobic007G153600--Sobic003G130400 Sobic003G144500 Sobic003G144500 Sobic007G153600--Sobic003G144500 Sobic007G153600--Sobic010G133000 Sobic007G153600--Sobic010G041900 Sobic002G062100 Sobic002G062100 Sobic007G153600--Sobic002G062100 Sobic002G143300 Sobic002G143300 Sobic007G153600--Sobic002G143300 Sobic003G395000 Sobic003G395000 Sobic007G153600--Sobic003G395000 Sobic004G347500--Sobic005G021000 Sobic004G347500--Sobic002G177600 Sobic002G240000 Sobic002G240000 Sobic004G347500--Sobic002G240000 Sobic004G347500--Sobic001G004600 Sobic001G534200 Sobic001G534200 Sobic004G347500--Sobic001G534200 Sobic004G347500--Sobic002G232900 Sobic007G191500 Sobic007G191500 Sobic004G347500--Sobic007G191500 Sobic006G217800 Sobic006G217800 Sobic004G347500--Sobic006G217800 Sobic004G347500--Sobic001G386600 Sobic010G177100--Sobic001G460100 Sobic003G259300 Sobic003G259300 Sobic010G177100--Sobic003G259300 Sobic010G079100 Sobic010G079100 Sobic010G177100--Sobic010G079100 Sobic010G177100--Sobic003G024000 Sobic005G157300 Sobic005G157300 Sobic010G177100--Sobic005G157300 Sobic001G425700 Sobic001G425700 Sobic010G177100--Sobic001G425700 Sobic010G177100--Sobic007G050800 Sobic003G412800 Sobic003G412800 Sobic010G177100--Sobic003G412800 Sobic009G225500 Sobic009G225500 Sobic010G177100--Sobic009G225500
Octagon: transcription factors


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