Gene annotation
Transcriptome id Sobic.001G112500.1
Synonym HB33, Sb01g010020, AtHB33
Functional annotation ZF-HD protein dimerisation region containing protein, expressed
UniProt C5WMZ9
Pfam PF04770
Panther DB PTHR31948 PTHR31948:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G75240 : homeobox protein 33
RAP-DB (Rice) LOC_Os03g50920.1 : ZF-HD protein dimerisation region containing protein, expressed
MaizeGDB (Corn) Zm00025a016936 , Zm00025a005471 , Zm00025a007898
Brachypodium KQJ98449 , KQJ98684 , KQJ92483 , KQK13510 , KQJ91876
Barley HORVU4Hr1G008360.1 , HORVU5Hr1G065740.1 , HORVU5Hr1G065740.3 , HORVU5Hr1G065740.2
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G232900 helix-loop-helix DNA-binding protein, putative, expressed -
2 Sobic.004G347500 2-phosphoglycerate kinase-related, putative, expressed -
3 Sobic.002G256900 acyl-ACP thioesterase, putative, expressed K10782: fatty acyl-ACP thioesterase A
4 Sobic.001G336200 "Grain Length3.2(Ortholog in rice:Adamski et al., 2009(PubMedID : 31659842)@cytochrome P450, putative, expressed -
5 Sobic.006G013300 receptor-like protein kinase 2 precursor, putative, expressed -
6 Sobic.007G153600 similar to Protein HVA22(PubMedID : 29862293)@HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
7 Sobic.002G265200 formin, putative, expressed -
8 Sobic.009G208600 POEI52 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
9 Sobic.003G350400 thaumatin, putative, expressed -
10 Sobic.007G160400 ZF-HD homeobox protein, putative, expressed -
11 Sobic.003G098300 hydroxyproline-rich glycoprotein family protein, putative, expressed -
12 Sobic.005G021000 AP2 domain containing protein, expressed K09285: OVM, AP2-like factor, ANT lineage
13 Sobic.002G240000 expressed protein K19307: 25S rRNA (uracil2634-N3)-methyltransferase
14 Sobic.002G062100 exostosin family protein, putative, expressed -
15 Sobic.005G126701 - -
16 Sobic.002G413200 glucosyltransferase, putative, expressed -
17 Sobic.009G026850 - -
18 Sobic.001G203350 - -
19 Sobic.006G208000 DNA repair ATPase-related, putative, expressed -
20 Sobic.004G142400 ATP-binding region, ATPase-like domain containing protein, expressed -


Gene co-expression network
sample Sobic001G112500 Sobic001G112500 Sobic002G232900 Sobic002G232900 Sobic001G112500--Sobic002G232900 Sobic004G347500 Sobic004G347500 Sobic001G112500--Sobic004G347500 Sobic002G256900 Sobic002G256900 Sobic001G112500--Sobic002G256900 Sobic001G336200 Sobic001G336200 Sobic001G112500--Sobic001G336200 Sobic006G013300 Sobic006G013300 Sobic001G112500--Sobic006G013300 Sobic007G153600 Sobic007G153600 Sobic001G112500--Sobic007G153600 Sobic002G265200 Sobic002G265200 Sobic001G112500--Sobic002G265200 Sobic009G208600 Sobic009G208600 Sobic001G112500--Sobic009G208600 Sobic003G350400 Sobic003G350400 Sobic001G112500--Sobic003G350400 Sobic002G232900--Sobic009G208600 Sobic002G232900--Sobic006G013300 Sobic005G021000 Sobic005G021000 Sobic002G232900--Sobic005G021000 Sobic001G254800 Sobic001G254800 Sobic002G232900--Sobic001G254800 Sobic003G419500 Sobic003G419500 Sobic002G232900--Sobic003G419500 Sobic002G232900--Sobic004G347500 Sobic004G029900 Sobic004G029900 Sobic002G232900--Sobic004G029900 Sobic002G240000 Sobic002G240000 Sobic002G232900--Sobic002G240000 Sobic005G105600 Sobic005G105600 Sobic002G232900--Sobic005G105600 Sobic004G347500--Sobic005G021000 Sobic002G177600 Sobic002G177600 Sobic004G347500--Sobic002G177600 Sobic004G347500--Sobic002G240000 Sobic001G004600 Sobic001G004600 Sobic004G347500--Sobic001G004600 Sobic001G534200 Sobic001G534200 Sobic004G347500--Sobic001G534200 Sobic004G347500--Sobic002G232900 Sobic007G191500 Sobic007G191500 Sobic004G347500--Sobic007G191500 Sobic006G217800 Sobic006G217800 Sobic004G347500--Sobic006G217800 Sobic001G386600 Sobic001G386600 Sobic004G347500--Sobic001G386600 Sobic006G226000 Sobic006G226000 Sobic002G256900--Sobic006G226000 Sobic003G086800 Sobic003G086800 Sobic002G256900--Sobic003G086800 Sobic004G123200 Sobic004G123200 Sobic002G256900--Sobic004G123200 Sobic002G256900--Sobic004G347500 Sobic007G160400 Sobic007G160400 Sobic002G256900--Sobic007G160400 Sobic009G012500 Sobic009G012500 Sobic002G256900--Sobic009G012500 Sobic002G256900--Sobic002G240000 Sobic001G203350 Sobic001G203350 Sobic002G256900--Sobic001G203350 Sobic002G256900--Sobic005G021000 Sobic005G126701 Sobic005G126701 Sobic001G336200--Sobic005G126701 Sobic001G336200--Sobic005G021000 Sobic001G336200--Sobic001G254800 Sobic007G025600 Sobic007G025600 Sobic001G336200--Sobic007G025600 Sobic001G336200--Sobic001G534200 Sobic001G336200--Sobic004G347500 Sobic009G103800 Sobic009G103800 Sobic001G336200--Sobic009G103800 Sobic001G254700 Sobic001G254700 Sobic001G336200--Sobic001G254700 Sobic001G261420 Sobic001G261420 Sobic001G336200--Sobic001G261420 Sobic006G013300--Sobic009G208600 Sobic006G013300--Sobic005G105600 Sobic006G013300--Sobic002G232900 Sobic006G013300--Sobic004G029900 Sobic001G508200 Sobic001G508200 Sobic006G013300--Sobic001G508200 Sobic006G013300--Sobic003G419500 Sobic006G013300--Sobic005G021000 Sobic006G013300--Sobic004G347500 Sobic006G013300--Sobic002G240000 Sobic002G413200 Sobic002G413200 Sobic007G153600--Sobic002G413200 Sobic010G007800 Sobic010G007800 Sobic007G153600--Sobic010G007800 Sobic003G130400 Sobic003G130400 Sobic007G153600--Sobic003G130400 Sobic003G144500 Sobic003G144500 Sobic007G153600--Sobic003G144500 Sobic010G133000 Sobic010G133000 Sobic007G153600--Sobic010G133000 Sobic010G041900 Sobic010G041900 Sobic007G153600--Sobic010G041900 Sobic002G062100 Sobic002G062100 Sobic007G153600--Sobic002G062100 Sobic002G143300 Sobic002G143300 Sobic007G153600--Sobic002G143300 Sobic003G395000 Sobic003G395000 Sobic007G153600--Sobic003G395000 Sobic007G097100 Sobic007G097100 Sobic002G265200--Sobic007G097100 Sobic006G016700 Sobic006G016700 Sobic002G265200--Sobic006G016700 Sobic006G197400 Sobic006G197400 Sobic002G265200--Sobic006G197400 Sobic002G265200--Sobic003G350400 Sobic002G265200--Sobic001G112500 Sobic006G255300 Sobic006G255300 Sobic002G265200--Sobic006G255300 Sobic002G265200--Sobic002G256900 Sobic001G068132 Sobic001G068132 Sobic002G265200--Sobic001G068132 Sobic002G265200--Sobic003G086800 Sobic009G208600--Sobic006G013300 Sobic009G208600--Sobic005G105600 Sobic009G208600--Sobic002G232900 Sobic009G208600--Sobic003G419500 Sobic009G208600--Sobic004G029900 Sobic009G208600--Sobic005G021000 Sobic009G208600--Sobic004G347500 Sobic009G208600--Sobic001G254800 Sobic009G208600--Sobic002G240000 Sobic003G350400--Sobic002G256900 Sobic003G350400--Sobic006G016700 Sobic003G350400--Sobic007G097100 Sobic004G311600 Sobic004G311600 Sobic003G350400--Sobic004G311600 Sobic006G041700 Sobic006G041700 Sobic003G350400--Sobic006G041700 Sobic004G330200 Sobic004G330200 Sobic003G350400--Sobic004G330200 Sobic002G175200 Sobic002G175200 Sobic003G350400--Sobic002G175200 Sobic001G246600 Sobic001G246600 Sobic003G350400--Sobic001G246600 Sobic004G142400 Sobic004G142400 Sobic003G350400--Sobic004G142400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.