Gene annotation
Transcriptome id Sobic.007G109800.1
Synonym Sb07g015410
Functional annotation Up-reguralion under drought (PubMedID : 24916767)
late embryogenesis abundant protein D-34, putative, expressed
UniProt C5YKB5
Pfam PF04927
Panther DB PTHR31174 PTHR31174:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G22490 : Seed maturation protein
RAP-DB (Rice) LOC_Os06g23350.1 : late embryogenesis abundant protein D-34, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS7B02G244300 , TraesCS7B02G244300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G062500 - -
2 Sobic.009G116700 "dehydrin SbDHN1, maps into mapped into a stay green mQTL (QSTG meta1.9)"(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@rab16/17 homolog(PubMedID : 15579713)@dehydrin, putative, expressed -
3 Sobic.002G141800 expressed protein -
4 Sobic.003G244100 "ABA-Responsive Element (ABRE) -binding factor BZ-1 basic-leucine zipper, maped into a stay green QTL (QSTG12_3"(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under drought(PubMedID : 24916767)@transcription factor, putative, expressed K09060: plant G-box-binding factor
5 Sobic.001G200700 expressed protein -
6 Sobic.003G011400 similar to Os01g0225600 protein(PubMedID : 29862293)@late embryogenesis abundant protein, putative, expressed -
7 Sobic.004G139100 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
8 Sobic.001G381700 expressed protein -
9 Sobic.009G046200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@peripheral-type benzodiazepine receptor, putative, expressed -
10 Sobic.003G236551 - -
11 Sobic.004G047900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed -
12 Sobic.003G292400 NADP-dependent malic enzyme(PubMedID : 26186930)@NADP-malic enzyme(PubMedID : 26904072)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@C4 carbon fixation(PubMedID : 28620409)@NADP-dependent malic enzyme, putative, expressed K00029: E1.1.1.40, malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)
13 Sobic.003G028000 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
14 Sobic.003G194400 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
15 Sobic.001G409400 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@OsRCI2-5 - Putative low temperature and salt responsive protein, expressed -
16 Sobic.001G307000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.002G316900 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@aconitate hydratase protein, putative, expressed K01681: ACO, aconitate hydratase
18 Sobic.006G104000 ethylene-insensitive 3, putative, expressed K14514: ethylene-insensitive protein 3
19 Sobic.005G183200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@14-3-3 protein, putative, expressed K06630: 14-3-3 protein epsilon
20 Sobic.002G132500 - -


Gene co-expression network
sample Sobic007G109800 Sobic007G109800 Sobic005G062500 Sobic005G062500 Sobic007G109800--Sobic005G062500 Sobic009G116700 Sobic009G116700 Sobic007G109800--Sobic009G116700 Sobic002G141800 Sobic002G141800 Sobic007G109800--Sobic002G141800 Sobic003G244100 Sobic003G244100 Sobic007G109800--Sobic003G244100 Sobic001G200700 Sobic001G200700 Sobic007G109800--Sobic001G200700 Sobic003G011400 Sobic003G011400 Sobic007G109800--Sobic003G011400 Sobic004G139100 Sobic004G139100 Sobic007G109800--Sobic004G139100 Sobic001G381700 Sobic001G381700 Sobic007G109800--Sobic001G381700 Sobic009G046200 Sobic009G046200 Sobic007G109800--Sobic009G046200 Sobic005G062500--Sobic007G109800 Sobic005G062500--Sobic001G381700 Sobic008G114800 Sobic008G114800 Sobic005G062500--Sobic008G114800 Sobic008G087500 Sobic008G087500 Sobic005G062500--Sobic008G087500 Sobic005G062500--Sobic004G139100 Sobic005G062500--Sobic003G244100 Sobic001G463450 Sobic001G463450 Sobic005G062500--Sobic001G463450 Sobic009G116700--Sobic002G141800 Sobic009G116700--Sobic003G011400 Sobic009G116700--Sobic009G046200 Sobic007G164500 Sobic007G164500 Sobic009G116700--Sobic007G164500 Sobic001G373600 Sobic001G373600 Sobic009G116700--Sobic001G373600 Sobic001G466450 Sobic001G466450 Sobic009G116700--Sobic001G466450 Sobic002G141800--Sobic009G116700 Sobic002G141800--Sobic003G244100 Sobic002G141800--Sobic003G011400 Sobic002G141800--Sobic009G046200 Sobic002G141800--Sobic007G164500 Sobic002G141800--Sobic001G373600 Sobic003G024600 Sobic003G024600 Sobic002G141800--Sobic003G024600 Sobic001G323600 Sobic001G323600 Sobic002G141800--Sobic001G323600 Sobic002G141800--Sobic001G466450 Sobic003G244100--Sobic002G141800 Sobic003G244100--Sobic009G116700 Sobic003G244100--Sobic009G046200 Sobic001G409400 Sobic001G409400 Sobic003G244100--Sobic001G409400 Sobic006G104000 Sobic006G104000 Sobic003G244100--Sobic006G104000 Sobic003G244100--Sobic003G011400 Sobic002G097000 Sobic002G097000 Sobic003G244100--Sobic002G097000 Sobic003G244100--Sobic001G373600 Sobic003G244100--Sobic001G466450 Sobic001G200700--Sobic003G011400 Sobic003G194400 Sobic003G194400 Sobic001G200700--Sobic003G194400 Sobic003G292400 Sobic003G292400 Sobic001G200700--Sobic003G292400 Sobic010G101300 Sobic010G101300 Sobic001G200700--Sobic010G101300 Sobic002G132500 Sobic002G132500 Sobic001G200700--Sobic002G132500 Sobic001G200700--Sobic009G046200 Sobic001G200700--Sobic006G104000 Sobic005G183200 Sobic005G183200 Sobic001G200700--Sobic005G183200 Sobic001G200700--Sobic009G116700 Sobic003G011400--Sobic001G200700 Sobic003G011400--Sobic009G116700 Sobic003G011400--Sobic009G046200 Sobic003G011400--Sobic007G164500 Sobic003G011400--Sobic001G323600 Sobic003G011400--Sobic001G373600 Sobic003G011400--Sobic003G024600 Sobic003G011400--Sobic001G466450 Sobic004G139100--Sobic007G109800 Sobic004G139100--Sobic001G381700 Sobic004G139100--Sobic003G011400 Sobic009G006500 Sobic009G006500 Sobic004G139100--Sobic009G006500 Sobic004G139100--Sobic001G200700 Sobic004G139100--Sobic001G409400 Sobic004G108100 Sobic004G108100 Sobic004G139100--Sobic004G108100 Sobic009G015500 Sobic009G015500 Sobic004G139100--Sobic009G015500 Sobic001G452200 Sobic001G452200 Sobic004G139100--Sobic001G452200 Sobic001G381700--Sobic005G062500 Sobic001G381700--Sobic004G139100 Sobic001G381700--Sobic007G109800 Sobic003G236551 Sobic003G236551 Sobic001G381700--Sobic003G236551 Sobic001G048900 Sobic001G048900 Sobic001G381700--Sobic001G048900 Sobic001G381700--Sobic008G114800 Sobic001G381700--Sobic001G409400 Sobic001G381700--Sobic003G244100 Sobic001G307000 Sobic001G307000 Sobic001G381700--Sobic001G307000 Sobic009G046200--Sobic001G373600 Sobic009G046200--Sobic001G466450 Sobic009G046200--Sobic007G164500
Octagon: transcription factors


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