Gene annotation
Transcriptome id Sobic.005G062500.1
Synonym
Functional annotation -
UniProt A0A1B6PQH8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os11g07911.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G109800 Up-reguralion under drought(PubMedID : 24916767)@late embryogenesis abundant protein D-34, putative, expressed -
2 Sobic.001G381700 expressed protein -
3 Sobic.008G114800 - -
4 Sobic.008G087500 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
5 Sobic.004G139100 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
6 Sobic.003G244100 "ABA-Responsive Element (ABRE) -binding factor BZ-1 basic-leucine zipper, maped into a stay green QTL (QSTG12_3"(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under drought(PubMedID : 24916767)@transcription factor, putative, expressed K09060: plant G-box-binding factor
7 Sobic.001G463450 - -
8 Sobic.001G463450 - -
9 Sobic.001G463450 - -
10 Sobic.001G463450 - -
11 Sobic.001G463450 - -
12 Sobic.001G463450 - -
13 Sobic.008G087800 expressed protein -
14 Sobic.004G283550 - -
15 Sobic.001G409400 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@OsRCI2-5 - Putative low temperature and salt responsive protein, expressed -
16 Sobic.009G116700 "dehydrin SbDHN1, maps into mapped into a stay green mQTL (QSTG meta1.9)"(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@rab16/17 homolog(PubMedID : 15579713)@dehydrin, putative, expressed -
17 Sobic.003G028000 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
18 Sobic.003G236551 - -
19 Sobic.002G141800 expressed protein -
20 Sobic.009G046200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@peripheral-type benzodiazepine receptor, putative, expressed -


Gene co-expression network
sample Sobic005G062500 Sobic005G062500 Sobic007G109800 Sobic007G109800 Sobic005G062500--Sobic007G109800 Sobic001G381700 Sobic001G381700 Sobic005G062500--Sobic001G381700 Sobic008G114800 Sobic008G114800 Sobic005G062500--Sobic008G114800 Sobic008G087500 Sobic008G087500 Sobic005G062500--Sobic008G087500 Sobic004G139100 Sobic004G139100 Sobic005G062500--Sobic004G139100 Sobic003G244100 Sobic003G244100 Sobic005G062500--Sobic003G244100 Sobic001G463450 Sobic001G463450 Sobic005G062500--Sobic001G463450 Sobic007G109800--Sobic005G062500 Sobic009G116700 Sobic009G116700 Sobic007G109800--Sobic009G116700 Sobic002G141800 Sobic002G141800 Sobic007G109800--Sobic002G141800 Sobic007G109800--Sobic003G244100 Sobic001G200700 Sobic001G200700 Sobic007G109800--Sobic001G200700 Sobic003G011400 Sobic003G011400 Sobic007G109800--Sobic003G011400 Sobic007G109800--Sobic004G139100 Sobic007G109800--Sobic001G381700 Sobic009G046200 Sobic009G046200 Sobic007G109800--Sobic009G046200 Sobic001G381700--Sobic005G062500 Sobic001G381700--Sobic004G139100 Sobic001G381700--Sobic007G109800 Sobic003G236551 Sobic003G236551 Sobic001G381700--Sobic003G236551 Sobic001G048900 Sobic001G048900 Sobic001G381700--Sobic001G048900 Sobic001G381700--Sobic008G114800 Sobic001G409400 Sobic001G409400 Sobic001G381700--Sobic001G409400 Sobic001G381700--Sobic003G244100 Sobic001G307000 Sobic001G307000 Sobic001G381700--Sobic001G307000 Sobic008G114800--Sobic001G463450 Sobic005G095640 Sobic005G095640 Sobic008G114800--Sobic005G095640 Sobic004G283550 Sobic004G283550 Sobic008G114800--Sobic004G283550 Sobic008G114800--Sobic005G062500 Sobic010G146500 Sobic010G146500 Sobic008G087500--Sobic010G146500 Sobic008G087500--Sobic003G244100 Sobic002G164960 Sobic002G164960 Sobic008G087500--Sobic002G164960 Sobic006G116801 Sobic006G116801 Sobic008G087500--Sobic006G116801 Sobic001G424000 Sobic001G424000 Sobic008G087500--Sobic001G424000 Sobic008G087500--Sobic001G409400 Sobic002G075800 Sobic002G075800 Sobic008G087500--Sobic002G075800 Sobic004G101400 Sobic004G101400 Sobic008G087500--Sobic004G101400 Sobic008G087800 Sobic008G087800 Sobic008G087500--Sobic008G087800 Sobic004G139100--Sobic007G109800 Sobic004G139100--Sobic001G381700 Sobic004G139100--Sobic003G011400 Sobic009G006500 Sobic009G006500 Sobic004G139100--Sobic009G006500 Sobic004G139100--Sobic001G200700 Sobic004G139100--Sobic001G409400 Sobic004G108100 Sobic004G108100 Sobic004G139100--Sobic004G108100 Sobic009G015500 Sobic009G015500 Sobic004G139100--Sobic009G015500 Sobic001G452200 Sobic001G452200 Sobic004G139100--Sobic001G452200 Sobic003G244100--Sobic002G141800 Sobic003G244100--Sobic009G116700 Sobic003G244100--Sobic009G046200 Sobic003G244100--Sobic001G409400 Sobic006G104000 Sobic006G104000 Sobic003G244100--Sobic006G104000 Sobic003G244100--Sobic003G011400 Sobic002G097000 Sobic002G097000 Sobic003G244100--Sobic002G097000 Sobic001G373600 Sobic001G373600 Sobic003G244100--Sobic001G373600 Sobic001G466450 Sobic001G466450 Sobic003G244100--Sobic001G466450 Sobic001G463450--Sobic001G463450 Sobic001G463450--Sobic008G114800 Sobic001G463450--Sobic005G095640 Sobic001G463450--Sobic004G283550 Sobic010G092900 Sobic010G092900 Sobic001G463450--Sobic010G092900
Octagon: transcription factors


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