Gene annotation
| Transcriptome id | Sobic.003G028000.1 |
|---|---|
| Synonym | TINY2, Sb03g002630, SbERF33, ethylene response factor 33 |
| Functional annotation | Not investigated (PubMedID : 23766026) AP2 domain containing protein, expressed |
| UniProt | C5XLT0 |
| Pfam | PF00847 |
| Panther DB | PTHR31985 PTHR31985:SF39 |
| NCBI CDD | - |
| KEGG Orthology | K09286; EREBP-like factor |
| Gene Ontology | GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity |
Orthologs (automatic annotation)
| TAIR | AT5G11590 : Integrase-type DNA-binding superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os01g10370.1 : AP2 domain containing protein, expressed |
| MaizeGDB (Corn) | Zm00025a020096 , Zm00025a035855 , Zm00025a022970 , Zm00025a010312 , Zm00025a056875 , Zm00025a051964 |
| Brachypodium | KQK03191 , KQK00606 , KQJ83929 , KQJ94139 |
| Barley | HORVU1Hr1G056090.1 , HORVU3Hr1G026970.1 , HORVU3Hr1G026950.1 , HORVU0Hr1G018280.1 , HORVU0Hr1G030500.1 , HORVU0Hr1G018240.1 , HORVU6Hr1G062940.1 , HORVU2Hr1G097850.6 , HORVU2Hr1G097850.5 , HORVU2Hr1G097850.4 , HORVU2Hr1G097850.3 , HORVU2Hr1G097850.1 , HORVU3Hr1G086870.2 , HORVU3Hr1G086870.1 |
| Wheat | - |
| Populus | - |
JBrowse
| Sobic.003G028000 |
Expression pattern by RNA-Seq analysis
 |
Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.007G109800 | Up-reguralion under drought(PubMedID : 24916767)@late embryogenesis abundant protein D-34, putative, expressed | - |
| 2 | Sobic.002G366500 | anthocyanin 3-O-beta-glucosyltransferase, putative, expressed | - |
| 3 | Sobic.003G236551 | - | - |
| 4 | Sobic.003G243500 | AP2 domain containing protein, expressed | - |
| 5 | Sobic.006G074300 | LTPL102 - Protease inhibitor/seed storage/LTP family protein precursor, expressed | - |
| 6 | Sobic.003G278400 | DUF581 domain containing protein, expressed | - |
| 7 | Sobic.002G133700 | - | - |
| 8 | Sobic.007G130800 | aldehyde dehydrogenase, putative, expressed | K00130: betB, betaine-aldehyde dehydrogenase |
| 9 | Sobic.001G338000 | oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed | K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase |
| 10 | Sobic.002G316900 | Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@aconitate hydratase protein, putative, expressed | K01681: ACO, aconitate hydratase |
| 11 | Sobic.001G332966 | - | - |
| 12 | Sobic.009G026800 | lectin protein kinase family protein, putative, expressed | - |
| 13 | Sobic.008G114800 | - | - |
| 14 | Sobic.004G243800 | HEAT repeat family protein, putative, expressed | - |
| 15 | Sobic.009G222000 | LTPL153 - Protease inhibitor/seed storage/LTP family protein precursor, expressed | - |
| 16 | Sobic.003G134900 | plastocyanin-like domain containing protein, putative, expressed | - |
| 17 | Sobic.004G219900 | -(PubMedID : 26976818)@phosphorylation of leaf PEPC during C4 photosynthesis.(PubMedID : 16925599)@CAMK_CAMK_like.14 - CAMK includes calcium/calmodulin depedent protein kinases, expressed | - |
| 18 | Sobic.010G228100 | "DEP3(Ortholog in rice:Qiao et al., 2011)"(PubMedID : 31659937)@PLA IIIA/PLP7, putative, expressed | - |
| 19 | Sobic.009G251100 | TTL1, putative, expressed | K09527: DnaJ homolog subfamily C member 7 |
| 20 | Sobic.006G187750 | - | - |
Gene co-expression network
Octagon: transcription factors
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