Gene annotation
Transcriptome id Sobic.009G026800.2
Synonym Sb09g002240
Functional annotation lectin protein kinase family protein, putative, expressed
UniProt A0A1Z5R1K4
Pfam PF00139 PF00069
Panther DB PTHR27007 PTHR27007:SF47
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G53380 : Concanavalin A-like lectin protein kinase family protein
RAP-DB (Rice) LOC_Os05g03450.1 : lectin protein kinase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a040731 , Zm00025a038189
Brachypodium PNT71981
Barley HORVU4Hr1G020000.1 , HORVU4Hr1G020000.2 , HORVU1Hr1G013700.1 , HORVU1Hr1G013700.2
Wheat TraesCS4D02G109000 , TraesCS4A02G207800
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.009G026800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G507000 expressed protein -
2 Sobic.007G139500 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
3 Sobic.010G177100 expressed protein -
4 Sobic.001G460100 heparanase-like protein precursor, putative, expressed K07964: heparanase
5 Sobic.001G051300 BEE 1, putative, expressed -
6 Sobic.010G079100 lysM domain-containing GPI-anchored protein 1 precursor, putative, expressed -
7 Sobic.003G389100 formin-like protein 1 precursor, putative, expressed -
8 Sobic.003G179500 expressed protein K06676: BRRN1, BRN1, condensin complex subunit 2
9 Sobic.003G226700 kinesin motor domain containing protein, putative, expressed K10393: KIF2_24, kinesin family member 2/24
10 Sobic.010G118300 auxin-independent growth promoter protein, putative, expressed -
11 Sobic.006G218900 TKL_IRAK_CrRLK1L-1.9 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
12 Sobic.003G412800 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
13 Sobic.002G081700 RGH1A, putative, expressed -
14 Sobic.001G196000 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
15 Sobic.003G289800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
16 Sobic.003G024000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide-N4-asparagine amidase A, putative, expressed -
17 Sobic.009G208900 expressed protein -
18 Sobic.001G425700 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
19 Sobic.010G134900 DNA binding protein, putative, expressed -
20 Sobic.005G068800 TOPBP1A - Similar to DNA replication protein TOPBP1 from, expressed K10728: topoisomerase (DNA) II binding protein 1


Gene co-expression network
sample Sobic009G026800 Sobic009G026800 Sobic001G507000 Sobic001G507000 Sobic009G026800--Sobic001G507000 Sobic007G139500 Sobic007G139500 Sobic009G026800--Sobic007G139500 Sobic010G177100 Sobic010G177100 Sobic009G026800--Sobic010G177100 Sobic001G460100 Sobic001G460100 Sobic009G026800--Sobic001G460100 Sobic001G051300 Sobic001G051300 Sobic009G026800--Sobic001G051300 Sobic010G079100 Sobic010G079100 Sobic009G026800--Sobic010G079100 Sobic003G389100 Sobic003G389100 Sobic009G026800--Sobic003G389100 Sobic003G179500 Sobic003G179500 Sobic009G026800--Sobic003G179500 Sobic003G226700 Sobic003G226700 Sobic009G026800--Sobic003G226700 Sobic005G068800 Sobic005G068800 Sobic001G507000--Sobic005G068800 Sobic004G321400 Sobic004G321400 Sobic001G507000--Sobic004G321400 Sobic003G183700 Sobic003G183700 Sobic001G507000--Sobic003G183700 Sobic001G146900 Sobic001G146900 Sobic001G507000--Sobic001G146900 Sobic006G120600 Sobic006G120600 Sobic001G507000--Sobic006G120600 Sobic004G156200 Sobic004G156200 Sobic001G507000--Sobic004G156200 Sobic006G195500 Sobic006G195500 Sobic001G507000--Sobic006G195500 Sobic004G095200 Sobic004G095200 Sobic001G507000--Sobic004G095200 Sobic009G087000 Sobic009G087000 Sobic001G507000--Sobic009G087000 Sobic001G196000 Sobic001G196000 Sobic007G139500--Sobic001G196000 Sobic007G139500--Sobic001G051300 Sobic009G206500 Sobic009G206500 Sobic007G139500--Sobic009G206500 Sobic001G437500 Sobic001G437500 Sobic007G139500--Sobic001G437500 Sobic007G139500--Sobic003G179500 Sobic001G103000 Sobic001G103000 Sobic007G139500--Sobic001G103000 Sobic003G017500 Sobic003G017500 Sobic007G139500--Sobic003G017500 Sobic002G191000 Sobic002G191000 Sobic007G139500--Sobic002G191000 Sobic009G214100 Sobic009G214100 Sobic007G139500--Sobic009G214100 Sobic010G177100--Sobic001G460100 Sobic003G259300 Sobic003G259300 Sobic010G177100--Sobic003G259300 Sobic010G177100--Sobic010G079100 Sobic003G024000 Sobic003G024000 Sobic010G177100--Sobic003G024000 Sobic005G157300 Sobic005G157300 Sobic010G177100--Sobic005G157300 Sobic001G425700 Sobic001G425700 Sobic010G177100--Sobic001G425700 Sobic007G050800 Sobic007G050800 Sobic010G177100--Sobic007G050800 Sobic003G412800 Sobic003G412800 Sobic010G177100--Sobic003G412800 Sobic009G225500 Sobic009G225500 Sobic010G177100--Sobic009G225500 Sobic001G460100--Sobic010G177100 Sobic009G188900 Sobic009G188900 Sobic001G460100--Sobic009G188900 Sobic009G113900 Sobic009G113900 Sobic001G460100--Sobic009G113900 Sobic003G084200 Sobic003G084200 Sobic001G460100--Sobic003G084200 Sobic009G012600 Sobic009G012600 Sobic001G460100--Sobic009G012600 Sobic001G460100--Sobic003G024000 Sobic001G460100--Sobic007G050800 Sobic006G275500 Sobic006G275500 Sobic001G460100--Sobic006G275500 Sobic003G102700 Sobic003G102700 Sobic001G460100--Sobic003G102700 Sobic003G289800 Sobic003G289800 Sobic001G051300--Sobic003G289800 Sobic002G383100 Sobic002G383100 Sobic001G051300--Sobic002G383100 Sobic001G051300--Sobic007G139500 Sobic001G051300--Sobic009G087000 Sobic006G071628 Sobic006G071628 Sobic001G051300--Sobic006G071628 Sobic001G051300--Sobic003G179500 Sobic010G147700 Sobic010G147700 Sobic001G051300--Sobic010G147700 Sobic001G051300--Sobic003G017500 Sobic003G201000 Sobic003G201000 Sobic001G051300--Sobic003G201000 Sobic010G079100--Sobic003G289800 Sobic010G079100--Sobic003G412800 Sobic001G369800 Sobic001G369800 Sobic010G079100--Sobic001G369800 Sobic009G172950 Sobic009G172950 Sobic010G079100--Sobic009G172950 Sobic010G079100--Sobic003G389100 Sobic001G169800 Sobic001G169800 Sobic010G079100--Sobic001G169800 Sobic010G079100--Sobic003G183700 Sobic010G079100--Sobic001G051300 Sobic010G079100--Sobic003G179500 Sobic003G389100--Sobic003G289800 Sobic003G389100--Sobic003G226700 Sobic003G389100--Sobic010G079100 Sobic003G389100--Sobic001G051300 Sobic007G084200 Sobic007G084200 Sobic003G389100--Sobic007G084200 Sobic003G420300 Sobic003G420300 Sobic003G389100--Sobic003G420300 Sobic002G276600 Sobic002G276600 Sobic003G389100--Sobic002G276600 Sobic003G389100--Sobic007G139500 Sobic003G389100--Sobic001G425700 Sobic003G179500--Sobic003G183700 Sobic010G103700 Sobic010G103700 Sobic003G179500--Sobic010G103700 Sobic010G105400 Sobic010G105400 Sobic003G179500--Sobic010G105400 Sobic005G144600 Sobic005G144600 Sobic003G179500--Sobic005G144600 Sobic003G179500--Sobic010G147700 Sobic003G179500--Sobic009G087000 Sobic005G110535 Sobic005G110535 Sobic003G179500--Sobic005G110535 Sobic006G116500 Sobic006G116500 Sobic003G179500--Sobic006G116500 Sobic004G047100 Sobic004G047100 Sobic003G179500--Sobic004G047100 Sobic003G226700--Sobic007G084200 Sobic003G226700--Sobic003G420300 Sobic003G292700 Sobic003G292700 Sobic003G226700--Sobic003G292700 Sobic003G226700--Sobic001G425700 Sobic003G226700--Sobic003G289800 Sobic009G212100 Sobic009G212100 Sobic003G226700--Sobic009G212100 Sobic001G487200 Sobic001G487200 Sobic003G226700--Sobic001G487200 Sobic004G315700 Sobic004G315700 Sobic003G226700--Sobic004G315700 Sobic003G226700--Sobic003G024000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.