Gene annotation
Transcriptome id Sobic.003G024000.1
Synonym Sb03g002300
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
peptide-N4-asparagine amidase A, putative, expressed
UniProt C5XL53
Pfam PF12222
Panther DB PTHR31104 PTHR31104:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14920 : Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein
RAP-DB (Rice) LOC_Os01g10930.1 : peptide-N4-asparagine amidase A, putative, expressed
MaizeGDB (Corn) Zm00025a035881 , Zm00025a035882
Brachypodium KQK03248 , KQK03249 , KQK03251
Barley HORVU3Hr1G029300.9 , HORVU3Hr1G029300.8 , HORVU3Hr1G029300.3 , HORVU3Hr1G029300.2 , HORVU3Hr1G029300.1 , HORVU3Hr1G029300.7 , HORVU3Hr1G029300.6 , HORVU3Hr1G029300.5 , HORVU3Hr1G029300.4 , HORVU3Hr1G029310.1 , HORVU3Hr1G029300.19 , HORVU3Hr1G029300.18 , HORVU3Hr1G029300.13 , HORVU3Hr1G029300.12 , HORVU3Hr1G029300.11 , HORVU3Hr1G029300.10 , HORVU3Hr1G029300.17 , HORVU3Hr1G029300.16 , HORVU3Hr1G029300.15 , HORVU3Hr1G029300.14 , HORVU3Hr1G029300.22 , HORVU3Hr1G029300.23 , HORVU3Hr1G029300.20 , HORVU3Hr1G029300.21 , HORVU1Hr1G013870.2 , HORVU1Hr1G013870.1
Wheat TraesCS3B02G168700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G425700 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
2 Sobic.001G199500 heat shock protein DnaJ, putative, expressed K09531: DnaJ homolog subfamily C member 11
3 Sobic.006G281900 down-regulated TF in developmental senescence(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
4 Sobic.003G226700 kinesin motor domain containing protein, putative, expressed K10393: KIF2_24, kinesin family member 2/24
5 Sobic.001G054700 seed specific protein Bn15D14A, putative, expressed -
6 Sobic.003G420300 zinc finger protein, putative, expressed -
7 Sobic.006G084300 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
8 Sobic.008G083500 expressed protein -
9 Sobic.003G292700 kinesin motor protein-related, putative, expressed K10406: kinesin family member C2/C3
10 Sobic.009G188900 acyltransferase, putative, expressed K13513: LCLAT1, lysocardiolipin and lysophospholipid acyltransferase
11 Sobic.003G289800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
12 Sobic.002G168000 expressed protein -
13 Sobic.003G259300 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
14 Sobic.001G461800 zinc finger family protein, putative, expressed -
15 Sobic.003G102700 exostosin family protein, putative, expressed -
16 Sobic.004G253500 auxin-independent growth promoter protein, putative, expressed -
17 Sobic.006G221300 expressed protein -
18 Sobic.005G157300 protein binding protein, putative, expressed -
19 Sobic.004G164700 expressed protein -
20 Sobic.002G021200 expressed protein K19001: HELLS, ATP-dependent DNA helicase


Gene co-expression network
sample Sobic003G024000 Sobic003G024000 Sobic001G425700 Sobic001G425700 Sobic003G024000--Sobic001G425700 Sobic001G199500 Sobic001G199500 Sobic003G024000--Sobic001G199500 Sobic006G281900 Sobic006G281900 Sobic003G024000--Sobic006G281900 Sobic003G226700 Sobic003G226700 Sobic003G024000--Sobic003G226700 Sobic001G054700 Sobic001G054700 Sobic003G024000--Sobic001G054700 Sobic003G420300 Sobic003G420300 Sobic003G024000--Sobic003G420300 Sobic006G084300 Sobic006G084300 Sobic003G024000--Sobic006G084300 Sobic008G083500 Sobic008G083500 Sobic003G024000--Sobic008G083500 Sobic003G292700 Sobic003G292700 Sobic003G024000--Sobic003G292700 Sobic003G259300 Sobic003G259300 Sobic001G425700--Sobic003G259300 Sobic001G425700--Sobic003G226700 Sobic002G006100 Sobic002G006100 Sobic001G425700--Sobic002G006100 Sobic001G425700--Sobic003G024000 Sobic003G104100 Sobic003G104100 Sobic001G425700--Sobic003G104100 Sobic004G164700 Sobic004G164700 Sobic001G425700--Sobic004G164700 Sobic009G225500 Sobic009G225500 Sobic001G425700--Sobic009G225500 Sobic001G425700--Sobic006G281900 Sobic009G127800 Sobic009G127800 Sobic001G425700--Sobic009G127800 Sobic005G088900 Sobic005G088900 Sobic001G199500--Sobic005G088900 Sobic003G102700 Sobic003G102700 Sobic001G199500--Sobic003G102700 Sobic001G199500--Sobic006G084300 Sobic001G199500--Sobic003G024000 Sobic001G199500--Sobic006G281900 Sobic009G188900 Sobic009G188900 Sobic001G199500--Sobic009G188900 Sobic007G006800 Sobic007G006800 Sobic001G199500--Sobic007G006800 Sobic006G071628 Sobic006G071628 Sobic001G199500--Sobic006G071628 Sobic003G144000 Sobic003G144000 Sobic001G199500--Sobic003G144000 Sobic002G168000 Sobic002G168000 Sobic006G281900--Sobic002G168000 Sobic002G021200 Sobic002G021200 Sobic006G281900--Sobic002G021200 Sobic006G281900--Sobic009G188900 Sobic001G290500 Sobic001G290500 Sobic006G281900--Sobic001G290500 Sobic006G281900--Sobic001G199500 Sobic006G281900--Sobic001G425700 Sobic006G281900--Sobic009G225500 Sobic007G187700 Sobic007G187700 Sobic006G281900--Sobic007G187700 Sobic006G281900--Sobic003G024000 Sobic007G084200 Sobic007G084200 Sobic003G226700--Sobic007G084200 Sobic003G226700--Sobic003G420300 Sobic003G226700--Sobic003G292700 Sobic003G226700--Sobic001G425700 Sobic003G289800 Sobic003G289800 Sobic003G226700--Sobic003G289800 Sobic009G212100 Sobic009G212100 Sobic003G226700--Sobic009G212100 Sobic001G487200 Sobic001G487200 Sobic003G226700--Sobic001G487200 Sobic004G315700 Sobic004G315700 Sobic003G226700--Sobic004G315700 Sobic003G226700--Sobic003G024000 Sobic006G221300 Sobic006G221300 Sobic001G054700--Sobic006G221300 Sobic009G077300 Sobic009G077300 Sobic001G054700--Sobic009G077300 Sobic004G108400 Sobic004G108400 Sobic001G054700--Sobic004G108400 Sobic009G143200 Sobic009G143200 Sobic001G054700--Sobic009G143200 Sobic002G050700 Sobic002G050700 Sobic001G054700--Sobic002G050700 Sobic006G124400 Sobic006G124400 Sobic001G054700--Sobic006G124400 Sobic001G054700--Sobic009G127800 Sobic005G153000 Sobic005G153000 Sobic001G054700--Sobic005G153000 Sobic006G221800 Sobic006G221800 Sobic001G054700--Sobic006G221800 Sobic003G420300--Sobic003G292700 Sobic003G420300--Sobic003G226700 Sobic003G420300--Sobic008G083500 Sobic010G067600 Sobic010G067600 Sobic003G420300--Sobic010G067600 Sobic003G420300--Sobic003G289800 Sobic003G420300--Sobic004G315700 Sobic002G320600 Sobic002G320600 Sobic003G420300--Sobic002G320600 Sobic003G420300--Sobic007G084200 Sobic009G052100 Sobic009G052100 Sobic003G420300--Sobic009G052100 Sobic006G084300--Sobic004G315700 Sobic006G084300--Sobic001G199500 Sobic008G090000 Sobic008G090000 Sobic006G084300--Sobic008G090000 Sobic006G084300--Sobic009G212100 Sobic006G084300--Sobic006G071628 Sobic006G084300--Sobic001G425700 Sobic006G084300--Sobic003G104100 Sobic006G084300--Sobic006G281900 Sobic006G084300--Sobic003G024000 Sobic002G296000 Sobic002G296000 Sobic008G083500--Sobic002G296000 Sobic008G083500--Sobic003G420300 Sobic010G024500 Sobic010G024500 Sobic008G083500--Sobic010G024500 Sobic006G105600 Sobic006G105600 Sobic008G083500--Sobic006G105600 Sobic001G304800 Sobic001G304800 Sobic008G083500--Sobic001G304800 Sobic009G101100 Sobic009G101100 Sobic008G083500--Sobic009G101100 Sobic002G286700 Sobic002G286700 Sobic008G083500--Sobic002G286700 Sobic008G083500--Sobic003G292700 Sobic008G083500--Sobic001G054700 Sobic003G292700--Sobic003G420300 Sobic003G292700--Sobic003G226700 Sobic009G202801 Sobic009G202801 Sobic003G292700--Sobic009G202801 Sobic003G292700--Sobic001G054700 Sobic006G142500 Sobic006G142500 Sobic003G292700--Sobic006G142500 Sobic003G032200 Sobic003G032200 Sobic003G292700--Sobic003G032200 Sobic001G377700 Sobic001G377700 Sobic003G292700--Sobic001G377700 Sobic003G292700--Sobic002G021200 Sobic003G292700--Sobic008G083500
Octagon: transcription factors


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