Gene annotation
Transcriptome id Sobic.001G461800.1
Synonym Sb01g043340
Functional annotation zinc finger family protein, putative, expressed
UniProt A0A1B6QPS9
Pfam PF01529
Panther DB PTHR22883 PTHR22883:SF105
NCBI CDD KOG1311; DHHC-type Zn-finger proteins
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding


Orthologs (automatic annotation)
TAIR AT1G69420 : DHHC-type zinc finger family protein
RAP-DB (Rice) LOC_Os03g11110.1 : zinc finger family protein, putative, expressed
MaizeGDB (Corn) Zm00025a004005 , Zm00025a037462 , Zm00025a001089
Brachypodium KQK22998
Barley HORVU4Hr1G069190.5 , HORVU4Hr1G069190.4 , HORVU4Hr1G069190.7 , HORVU4Hr1G069190.6 , HORVU4Hr1G069190.1 , HORVU4Hr1G069190.3 , HORVU4Hr1G069190.2 , HORVU4Hr1G069190.9 , HORVU4Hr1G069190.8 , HORVU4Hr1G069190.10
Wheat TraesCS4A02G051700 , TraesCS4A02G051700 , TraesCS4D02G252800 , TraesCS4B02G252500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G250000 peroxidase family protein, expressed K00430: peroxidase
2 Sobic.004G164700 expressed protein -
3 Sobic.003G291000 protein kinase family protein, putative, expressed -
4 Sobic.002G286700 lysM domain-containing GPI-anchored protein precursor, putative, expressed -
5 Sobic.008G190000 leucine-rich repeat family protein, putative, expressed -
6 Sobic.003G078300 leucine-rich repeat protein-related, putative, expressed -
7 Sobic.004G253500 auxin-independent growth promoter protein, putative, expressed -
8 Sobic.001G381100 receptor-like protein kinase precursor, putative, expressed -
9 Sobic.006G241800 receptor kinase, putative, expressed -
10 Sobic.004G269100 ATROPGEF7/ROPGEF7, putative, expressed -
11 Sobic.001G074100 kinesin motor domain containing protein, putative, expressed K10401: kinesin family member 18/19
12 Sobic.002G259200 POEI18 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
13 Sobic.002G311000 "Receptor-like kinase(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659859)@leucine-rich repeat family protein, putative, expressed -
14 Sobic.003G024000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide-N4-asparagine amidase A, putative, expressed -
15 Sobic.005G092700 expressed protein -
16 Sobic.010G024500 expressed protein -
17 Sobic.001G425700 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
18 Sobic.002G362700 zinc finger family protein, putative, expressed -
19 Sobic.008G083500 expressed protein -
20 Sobic.002G045200 protein kinase, putative, expressed -


Gene co-expression network
sample Sobic001G461800 Sobic001G461800 Sobic003G250000 Sobic003G250000 Sobic001G461800--Sobic003G250000 Sobic004G164700 Sobic004G164700 Sobic001G461800--Sobic004G164700 Sobic003G291000 Sobic003G291000 Sobic001G461800--Sobic003G291000 Sobic002G286700 Sobic002G286700 Sobic001G461800--Sobic002G286700 Sobic008G190000 Sobic008G190000 Sobic001G461800--Sobic008G190000 Sobic003G078300 Sobic003G078300 Sobic001G461800--Sobic003G078300 Sobic004G253500 Sobic004G253500 Sobic001G461800--Sobic004G253500 Sobic001G381100 Sobic001G381100 Sobic001G461800--Sobic001G381100 Sobic006G241800 Sobic006G241800 Sobic001G461800--Sobic006G241800 Sobic003G250000--Sobic001G461800 Sobic003G250000--Sobic004G253500 Sobic004G269100 Sobic004G269100 Sobic003G250000--Sobic004G269100 Sobic003G250000--Sobic003G078300 Sobic009G002900 Sobic009G002900 Sobic003G250000--Sobic009G002900 Sobic003G250000--Sobic003G291000 Sobic003G250000--Sobic002G286700 Sobic003G259500 Sobic003G259500 Sobic003G250000--Sobic003G259500 Sobic002G259200 Sobic002G259200 Sobic003G250000--Sobic002G259200 Sobic004G164700--Sobic006G241800 Sobic002G362700 Sobic002G362700 Sobic004G164700--Sobic002G362700 Sobic004G164700--Sobic008G190000 Sobic004G164700--Sobic001G461800 Sobic006G142500 Sobic006G142500 Sobic004G164700--Sobic006G142500 Sobic010G024500 Sobic010G024500 Sobic004G164700--Sobic010G024500 Sobic003G041900 Sobic003G041900 Sobic004G164700--Sobic003G041900 Sobic001G425700 Sobic001G425700 Sobic004G164700--Sobic001G425700 Sobic010G086000 Sobic010G086000 Sobic004G164700--Sobic010G086000 Sobic003G291000--Sobic006G241800 Sobic002G311000 Sobic002G311000 Sobic003G291000--Sobic002G311000 Sobic003G291000--Sobic001G461800 Sobic001G074100 Sobic001G074100 Sobic003G291000--Sobic001G074100 Sobic002G045200 Sobic002G045200 Sobic003G291000--Sobic002G045200 Sobic003G291000--Sobic003G078300 Sobic010G211800 Sobic010G211800 Sobic003G291000--Sobic010G211800 Sobic002G164700 Sobic002G164700 Sobic003G291000--Sobic002G164700 Sobic003G291000--Sobic003G250000 Sobic002G286700--Sobic008G190000 Sobic001G304800 Sobic001G304800 Sobic002G286700--Sobic001G304800 Sobic003G246800 Sobic003G246800 Sobic002G286700--Sobic003G246800 Sobic008G083500 Sobic008G083500 Sobic002G286700--Sobic008G083500 Sobic002G296000 Sobic002G296000 Sobic002G286700--Sobic002G296000 Sobic009G101100 Sobic009G101100 Sobic002G286700--Sobic009G101100 Sobic002G286700--Sobic001G461800 Sobic006G105600 Sobic006G105600 Sobic002G286700--Sobic006G105600 Sobic003G032200 Sobic003G032200 Sobic002G286700--Sobic003G032200 Sobic008G190000--Sobic001G381100 Sobic005G092700 Sobic005G092700 Sobic008G190000--Sobic005G092700 Sobic001G160000 Sobic001G160000 Sobic008G190000--Sobic001G160000 Sobic008G190000--Sobic010G024500 Sobic003G366000 Sobic003G366000 Sobic008G190000--Sobic003G366000 Sobic008G042200 Sobic008G042200 Sobic008G190000--Sobic008G042200 Sobic008G190000--Sobic002G286700 Sobic009G200000 Sobic009G200000 Sobic008G190000--Sobic009G200000 Sobic004G115700 Sobic004G115700 Sobic008G190000--Sobic004G115700 Sobic003G078300--Sobic002G311000 Sobic003G078300--Sobic004G253500 Sobic003G078300--Sobic001G461800 Sobic001G389600 Sobic001G389600 Sobic003G078300--Sobic001G389600 Sobic006G257200 Sobic006G257200 Sobic003G078300--Sobic006G257200 Sobic003G078300--Sobic003G291000 Sobic003G078300--Sobic002G045200 Sobic003G078300--Sobic003G250000 Sobic003G078300--Sobic002G362700 Sobic004G253500--Sobic003G078300 Sobic004G253500--Sobic001G461800 Sobic004G253500--Sobic003G250000 Sobic004G253500--Sobic003G259500 Sobic008G059900 Sobic008G059900 Sobic004G253500--Sobic008G059900 Sobic003G024000 Sobic003G024000 Sobic004G253500--Sobic003G024000 Sobic004G253500--Sobic009G002900 Sobic001G199500 Sobic001G199500 Sobic004G253500--Sobic001G199500 Sobic003G102700 Sobic003G102700 Sobic004G253500--Sobic003G102700 Sobic001G381100--Sobic008G190000 Sobic001G381100--Sobic001G160000 Sobic001G381100--Sobic001G074100 Sobic006G074900 Sobic006G074900 Sobic001G381100--Sobic006G074900 Sobic001G381100--Sobic005G092700 Sobic004G168600 Sobic004G168600 Sobic001G381100--Sobic004G168600 Sobic001G381100--Sobic010G024500 Sobic001G381100--Sobic006G241800 Sobic001G381100--Sobic003G366000 Sobic006G241800--Sobic003G291000 Sobic003G018700 Sobic003G018700 Sobic006G241800--Sobic003G018700 Sobic004G317200 Sobic004G317200 Sobic006G241800--Sobic004G317200 Sobic006G241800--Sobic004G164700 Sobic006G241800--Sobic010G024500 Sobic006G241800--Sobic002G311000 Sobic010G020600 Sobic010G020600 Sobic006G241800--Sobic010G020600 Sobic006G241800--Sobic001G381100 Sobic006G241800--Sobic001G074100
Octagon: transcription factors


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