Gene annotation
Transcriptome id Sobic.003G250000.1
Synonym Sb03g030630
Functional annotation peroxidase family protein, expressed
UniProt C5XG03
Pfam PF00141
Panther DB PTHR31235 PTHR31235:SF56
NCBI CDD -
KEGG Orthology K00430; peroxidase
Gene Ontology GO:0006979; response to oxidative stress GO:0004601peroxidase activity


Orthologs (automatic annotation)
TAIR AT2G34060 : Peroxidase superfamily protein
RAP-DB (Rice) LOC_Os08g42030.1 : peroxidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a028125 , Zm00025a005276 , Zm00025a010517
Brachypodium KQK09099 , KQK21233 , KQK08234 , KQJ91937
Barley HORVU5Hr1G076710.11 , HORVU5Hr1G076710.12 , HORVU5Hr1G076710.13 , HORVU3Hr1G065950.2 , HORVU3Hr1G065950.3 , HORVU3Hr1G065950.1 , HORVU3Hr1G065940.1 , HORVU3Hr1G065940.3 , HORVU3Hr1G065940.2 , HORVU6Hr1G075510.2 , HORVU6Hr1G075510.1 , HORVU7Hr1G045600.1 , HORVU7Hr1G045600.2 , HORVU7Hr1G018530.1 , HORVU7Hr1G018530.2 , HORVU7Hr1G018530.3 , HORVU5Hr1G076710.3 , HORVU5Hr1G076710.6 , HORVU5Hr1G076710.7 , HORVU5Hr1G076710.4 , HORVU5Hr1G076710.5 , HORVU5Hr1G076710.9 , HORVU3Hr1G060930.2 , HORVU3Hr1G060930.1
Wheat TraesCS2A02G451400 , TraesCS6A02G305600 , TraesCS2B02G472900 , TraesCS5A02G288200 , TraesCS5D02G256400 , TraesCS3B02G272100 , TraesCS3D02G244200 , TraesCS6D02G284700 , TraesCS4B02G340200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G461800 zinc finger family protein, putative, expressed -
2 Sobic.004G253500 auxin-independent growth promoter protein, putative, expressed -
3 Sobic.004G269100 ATROPGEF7/ROPGEF7, putative, expressed -
4 Sobic.003G078300 leucine-rich repeat protein-related, putative, expressed -
5 Sobic.009G002900 expressed protein -
6 Sobic.003G291000 protein kinase family protein, putative, expressed -
7 Sobic.002G286700 lysM domain-containing GPI-anchored protein precursor, putative, expressed -
8 Sobic.003G259500 - -
9 Sobic.002G259200 POEI18 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
10 Sobic.005G017500 GRAS family transcription factor domain containing protein, expressed -
11 Sobic.004G164700 expressed protein -
12 Sobic.003G055800 expressed protein -
13 Sobic.003G148400 Pectinesterase 1 (Precursor)(PubMedID : 26186930)@pectinesterase, putative, expressed K01051: pectinesterase
14 Sobic.003G024000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide-N4-asparagine amidase A, putative, expressed -
15 Sobic.003G251700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed K14486: K14486, auxin response factor
16 Sobic.002G311000 "Receptor-like kinase(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659859)@leucine-rich repeat family protein, putative, expressed -
17 Sobic.003G102700 exostosin family protein, putative, expressed -
18 Sobic.008G190000 leucine-rich repeat family protein, putative, expressed -
19 Sobic.003G376600 plant-specific domain TIGR01615 family protein, expressed -
20 Sobic.006G241800 receptor kinase, putative, expressed -


Gene co-expression network
sample Sobic003G250000 Sobic003G250000 Sobic001G461800 Sobic001G461800 Sobic003G250000--Sobic001G461800 Sobic004G253500 Sobic004G253500 Sobic003G250000--Sobic004G253500 Sobic004G269100 Sobic004G269100 Sobic003G250000--Sobic004G269100 Sobic003G078300 Sobic003G078300 Sobic003G250000--Sobic003G078300 Sobic009G002900 Sobic009G002900 Sobic003G250000--Sobic009G002900 Sobic003G291000 Sobic003G291000 Sobic003G250000--Sobic003G291000 Sobic002G286700 Sobic002G286700 Sobic003G250000--Sobic002G286700 Sobic003G259500 Sobic003G259500 Sobic003G250000--Sobic003G259500 Sobic002G259200 Sobic002G259200 Sobic003G250000--Sobic002G259200 Sobic001G461800--Sobic003G250000 Sobic004G164700 Sobic004G164700 Sobic001G461800--Sobic004G164700 Sobic001G461800--Sobic003G291000 Sobic001G461800--Sobic002G286700 Sobic008G190000 Sobic008G190000 Sobic001G461800--Sobic008G190000 Sobic001G461800--Sobic003G078300 Sobic001G461800--Sobic004G253500 Sobic001G381100 Sobic001G381100 Sobic001G461800--Sobic001G381100 Sobic006G241800 Sobic006G241800 Sobic001G461800--Sobic006G241800 Sobic004G253500--Sobic003G078300 Sobic004G253500--Sobic001G461800 Sobic004G253500--Sobic003G250000 Sobic004G253500--Sobic003G259500 Sobic008G059900 Sobic008G059900 Sobic004G253500--Sobic008G059900 Sobic003G024000 Sobic003G024000 Sobic004G253500--Sobic003G024000 Sobic004G253500--Sobic009G002900 Sobic001G199500 Sobic001G199500 Sobic004G253500--Sobic001G199500 Sobic003G102700 Sobic003G102700 Sobic004G253500--Sobic003G102700 Sobic008G052300 Sobic008G052300 Sobic004G269100--Sobic008G052300 Sobic004G269100--Sobic002G259200 Sobic003G251700 Sobic003G251700 Sobic004G269100--Sobic003G251700 Sobic005G092700 Sobic005G092700 Sobic004G269100--Sobic005G092700 Sobic005G153000 Sobic005G153000 Sobic004G269100--Sobic005G153000 Sobic004G269100--Sobic001G461800 Sobic004G269100--Sobic003G250000 Sobic003G222800 Sobic003G222800 Sobic004G269100--Sobic003G222800 Sobic003G055800 Sobic003G055800 Sobic004G269100--Sobic003G055800 Sobic002G311000 Sobic002G311000 Sobic003G078300--Sobic002G311000 Sobic003G078300--Sobic004G253500 Sobic003G078300--Sobic001G461800 Sobic001G389600 Sobic001G389600 Sobic003G078300--Sobic001G389600 Sobic006G257200 Sobic006G257200 Sobic003G078300--Sobic006G257200 Sobic003G078300--Sobic003G291000 Sobic002G045200 Sobic002G045200 Sobic003G078300--Sobic002G045200 Sobic003G078300--Sobic003G250000 Sobic002G362700 Sobic002G362700 Sobic003G078300--Sobic002G362700 Sobic009G002900--Sobic003G250000 Sobic009G002900--Sobic003G078300 Sobic009G002900--Sobic004G253500 Sobic009G177200 Sobic009G177200 Sobic009G002900--Sobic009G177200 Sobic003G223000 Sobic003G223000 Sobic009G002900--Sobic003G223000 Sobic009G002900--Sobic001G461800 Sobic008G113300 Sobic008G113300 Sobic009G002900--Sobic008G113300 Sobic006G093200 Sobic006G093200 Sobic009G002900--Sobic006G093200 Sobic009G002900--Sobic001G199500 Sobic003G291000--Sobic006G241800 Sobic003G291000--Sobic002G311000 Sobic003G291000--Sobic001G461800 Sobic001G074100 Sobic001G074100 Sobic003G291000--Sobic001G074100 Sobic003G291000--Sobic002G045200 Sobic003G291000--Sobic003G078300 Sobic010G211800 Sobic010G211800 Sobic003G291000--Sobic010G211800 Sobic002G164700 Sobic002G164700 Sobic003G291000--Sobic002G164700 Sobic003G291000--Sobic003G250000 Sobic002G286700--Sobic008G190000 Sobic001G304800 Sobic001G304800 Sobic002G286700--Sobic001G304800 Sobic003G246800 Sobic003G246800 Sobic002G286700--Sobic003G246800 Sobic008G083500 Sobic008G083500 Sobic002G286700--Sobic008G083500 Sobic002G296000 Sobic002G296000 Sobic002G286700--Sobic002G296000 Sobic009G101100 Sobic009G101100 Sobic002G286700--Sobic009G101100 Sobic002G286700--Sobic001G461800 Sobic006G105600 Sobic006G105600 Sobic002G286700--Sobic006G105600 Sobic003G032200 Sobic003G032200 Sobic002G286700--Sobic003G032200 Sobic003G259500--Sobic004G253500 Sobic003G259500--Sobic003G250000 Sobic003G259500--Sobic003G078300 Sobic003G333700 Sobic003G333700 Sobic003G259500--Sobic003G333700 Sobic003G259500--Sobic009G002900 Sobic007G079600 Sobic007G079600 Sobic003G259500--Sobic007G079600 Sobic003G148400 Sobic003G148400 Sobic003G259500--Sobic003G148400 Sobic003G259500--Sobic001G461800 Sobic002G078000 Sobic002G078000 Sobic003G259500--Sobic002G078000 Sobic002G259200--Sobic004G269100 Sobic002G259200--Sobic003G222800 Sobic001G493100 Sobic001G493100 Sobic002G259200--Sobic001G493100 Sobic002G259200--Sobic008G052300 Sobic006G172000 Sobic006G172000 Sobic002G259200--Sobic006G172000 Sobic002G259200--Sobic002G286700 Sobic005G163400 Sobic005G163400 Sobic002G259200--Sobic005G163400 Sobic006G041700 Sobic006G041700 Sobic002G259200--Sobic006G041700 Sobic002G259200--Sobic008G190000
Octagon: transcription factors


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