Gene annotation
Transcriptome id Sobic.003G055800.1
Synonym Sb03g004780
Functional annotation expressed protein
UniProt C5XNI7
Pfam -
Panther DB PTHR33257 PTHR33257:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G01790 : -
RAP-DB (Rice) LOC_Os01g07240.1 : expressed protein
MaizeGDB (Corn) Zm00025a036894 , Zm00025a042898 , Zm00025a035693 , Zm00025a023315
Brachypodium KQK07316 , PNT71548
Barley HORVU3Hr1G017590.1 , HORVU1Hr1G024540.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G269100 ATROPGEF7/ROPGEF7, putative, expressed -
2 Sobic.003G222800 lipase, putative, expressed -
3 Sobic.002G259200 POEI18 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
4 Sobic.003G041900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed -
5 Sobic.003G250000 peroxidase family protein, expressed K00430: peroxidase
6 Sobic.001G461800 zinc finger family protein, putative, expressed -
7 Sobic.003G291000 protein kinase family protein, putative, expressed -
8 Sobic.005G092700 expressed protein -
9 Sobic.010G097000 leaf senescence related protein, putative, expressed -
10 Sobic.001G493100 LTPL82 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.003G251700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed K14486: K14486, auxin response factor
12 Sobic.006G172000 pectinesterase, putative, expressed -
13 Sobic.001G448000 AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
14 Sobic.008G190000 leucine-rich repeat family protein, putative, expressed -
15 Sobic.004G215100 expressed protein -
16 Sobic.006G197400 helix-loop-helix DNA-binding protein, putative, expressed -
17 Sobic.002G206100 aspartic proteinase, putative, expressed -
18 Sobic.004G222300 DEF7 - Defensin and Defensin-like DEFL family, expressed -
19 Sobic.001G381100 receptor-like protein kinase precursor, putative, expressed -
20 Sobic.006G276900 expressed protein -


Gene co-expression network
sample Sobic003G055800 Sobic003G055800 Sobic004G269100 Sobic004G269100 Sobic003G055800--Sobic004G269100 Sobic003G222800 Sobic003G222800 Sobic003G055800--Sobic003G222800 Sobic002G259200 Sobic002G259200 Sobic003G055800--Sobic002G259200 Sobic003G041900 Sobic003G041900 Sobic003G055800--Sobic003G041900 Sobic003G250000 Sobic003G250000 Sobic003G055800--Sobic003G250000 Sobic001G461800 Sobic001G461800 Sobic003G055800--Sobic001G461800 Sobic003G291000 Sobic003G291000 Sobic003G055800--Sobic003G291000 Sobic005G092700 Sobic005G092700 Sobic003G055800--Sobic005G092700 Sobic010G097000 Sobic010G097000 Sobic003G055800--Sobic010G097000 Sobic008G052300 Sobic008G052300 Sobic004G269100--Sobic008G052300 Sobic004G269100--Sobic002G259200 Sobic003G251700 Sobic003G251700 Sobic004G269100--Sobic003G251700 Sobic004G269100--Sobic005G092700 Sobic005G153000 Sobic005G153000 Sobic004G269100--Sobic005G153000 Sobic004G269100--Sobic001G461800 Sobic004G269100--Sobic003G250000 Sobic004G269100--Sobic003G222800 Sobic004G269100--Sobic003G055800 Sobic003G222800--Sobic002G259200 Sobic003G222800--Sobic004G269100 Sobic003G222800--Sobic003G055800 Sobic003G222800--Sobic003G041900 Sobic006G041700 Sobic006G041700 Sobic003G222800--Sobic006G041700 Sobic001G493100 Sobic001G493100 Sobic003G222800--Sobic001G493100 Sobic006G172000 Sobic006G172000 Sobic003G222800--Sobic006G172000 Sobic003G222800--Sobic003G251700 Sobic003G222800--Sobic005G092700 Sobic002G259200--Sobic004G269100 Sobic002G259200--Sobic003G222800 Sobic002G259200--Sobic001G493100 Sobic002G259200--Sobic008G052300 Sobic002G259200--Sobic006G172000 Sobic002G286700 Sobic002G286700 Sobic002G259200--Sobic002G286700 Sobic005G163400 Sobic005G163400 Sobic002G259200--Sobic005G163400 Sobic002G259200--Sobic006G041700 Sobic008G190000 Sobic008G190000 Sobic002G259200--Sobic008G190000 Sobic004G164700 Sobic004G164700 Sobic003G041900--Sobic004G164700 Sobic010G023400 Sobic010G023400 Sobic003G041900--Sobic010G023400 Sobic010G192500 Sobic010G192500 Sobic003G041900--Sobic010G192500 Sobic006G241800 Sobic006G241800 Sobic003G041900--Sobic006G241800 Sobic010G086000 Sobic010G086000 Sobic003G041900--Sobic010G086000 Sobic003G041900--Sobic008G190000 Sobic004G317200 Sobic004G317200 Sobic003G041900--Sobic004G317200 Sobic006G142500 Sobic006G142500 Sobic003G041900--Sobic006G142500 Sobic006G211900 Sobic006G211900 Sobic003G041900--Sobic006G211900 Sobic003G250000--Sobic001G461800 Sobic004G253500 Sobic004G253500 Sobic003G250000--Sobic004G253500 Sobic003G250000--Sobic004G269100 Sobic003G078300 Sobic003G078300 Sobic003G250000--Sobic003G078300 Sobic009G002900 Sobic009G002900 Sobic003G250000--Sobic009G002900 Sobic003G250000--Sobic003G291000 Sobic003G250000--Sobic002G286700 Sobic003G259500 Sobic003G259500 Sobic003G250000--Sobic003G259500 Sobic003G250000--Sobic002G259200 Sobic001G461800--Sobic003G250000 Sobic001G461800--Sobic004G164700 Sobic001G461800--Sobic003G291000 Sobic001G461800--Sobic002G286700 Sobic001G461800--Sobic008G190000 Sobic001G461800--Sobic003G078300 Sobic001G461800--Sobic004G253500 Sobic001G381100 Sobic001G381100 Sobic001G461800--Sobic001G381100 Sobic001G461800--Sobic006G241800 Sobic003G291000--Sobic006G241800 Sobic002G311000 Sobic002G311000 Sobic003G291000--Sobic002G311000 Sobic003G291000--Sobic001G461800 Sobic001G074100 Sobic001G074100 Sobic003G291000--Sobic001G074100 Sobic002G045200 Sobic002G045200 Sobic003G291000--Sobic002G045200 Sobic003G291000--Sobic003G078300 Sobic010G211800 Sobic010G211800 Sobic003G291000--Sobic010G211800 Sobic002G164700 Sobic002G164700 Sobic003G291000--Sobic002G164700 Sobic003G291000--Sobic003G250000 Sobic005G092700--Sobic008G190000 Sobic008G042200 Sobic008G042200 Sobic005G092700--Sobic008G042200 Sobic009G200000 Sobic009G200000 Sobic005G092700--Sobic009G200000 Sobic004G115700 Sobic004G115700 Sobic005G092700--Sobic004G115700 Sobic003G366000 Sobic003G366000 Sobic005G092700--Sobic003G366000 Sobic005G092700--Sobic001G381100 Sobic001G160000 Sobic001G160000 Sobic005G092700--Sobic001G160000 Sobic001G390400 Sobic001G390400 Sobic005G092700--Sobic001G390400 Sobic001G075700 Sobic001G075700 Sobic005G092700--Sobic001G075700 Sobic010G097000--Sobic003G055800 Sobic009G172200 Sobic009G172200 Sobic010G097000--Sobic009G172200 Sobic010G097000--Sobic003G250000 Sobic003G148400 Sobic003G148400 Sobic010G097000--Sobic003G148400 Sobic010G097000--Sobic004G269100 Sobic010G097000--Sobic003G078300 Sobic010G097000--Sobic001G461800 Sobic010G097000--Sobic003G291000 Sobic010G097000--Sobic009G002900
Octagon: transcription factors


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