Gene annotation
| Transcriptome id | Sobic.001G448000.1 |
|---|---|
| Synonym | DRG, CKC, Sb01g042090, CKC1, ANT |
| Functional annotation | AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed |
| UniProt | A0A1B6QPI4 |
| Pfam | PF00847 |
| Panther DB | PTHR32467 PTHR32467:SF11 |
| NCBI CDD | - |
| KEGG Orthology | K09285; OVM, AP2-like factor, ANT lineage |
| Gene Ontology | GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity GO:0007275multicellular organism development |
Orthologs (automatic annotation)
| TAIR | AT4G37750 : Integrase-type DNA-binding superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os03g12950.1 : AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed |
| MaizeGDB (Corn) | Zm00025a052983 |
| Brachypodium | PNT77831 , PNT77828 , PNT77829 , PNT77830 , PNT77833 , PNT77832 , PNT77826 , PNT77827 |
| Barley | HORVU4Hr1G065990.2 , HORVU4Hr1G065990.5 , HORVU4Hr1G065990.4 , HORVU4Hr1G065990.6 , HORVU4Hr1G065990.9 , HORVU4Hr1G065990.17 , HORVU4Hr1G065990.11 , HORVU4Hr1G065990.10 , HORVU4Hr1G065990.12 , HORVU4Hr1G065990.15 , HORVU4Hr1G065990.14 , HORVU4Hr1G065990.16 , HORVU4Hr1G065990.13 , HORVU4Hr1G065990.1 |
| Wheat | TraesCS4A02G060400 , TraesCS4D02G237300 , TraesCS4D02G237300 , TraesCS4A02G060400 , TraesCS4B02G235900 , TraesCS4B02G235900 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
 |
Find similar expressed genes
 |
| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.004G139900 | ATP binding, related, putative, expressed | - |
| 2 | Sobic.009G200000 | expressed protein | - |
| 3 | Sobic.007G097100 | aspartic proteinase nepenthesin precursor, putative, expressed | - |
| 4 | Sobic.008G042200 | DUF623 domain containing protein, expressed | - |
| 5 | Sobic.004G115700 | extra-large G-protein-related, putative, expressed | - |
| 6 | Sobic.004G269100 | ATROPGEF7/ROPGEF7, putative, expressed | - |
| 7 | Sobic.004G215100 | expressed protein | - |
| 8 | Sobic.008G123200 | AAA-type ATPase family protein, putative, expressed | - |
| 9 | Sobic.005G092700 | expressed protein | - |
| 10 | Sobic.003G350400 | thaumatin, putative, expressed | - |
| 11 | Sobic.010G106100 | endoglucanase, putative, expressed | - |
| 12 | Sobic.008G190000 | leucine-rich repeat family protein, putative, expressed | - |
| 13 | Sobic.004G311600 | lysM domain-containing GPI-anchored protein precursor, putative, expressed | - |
| 14 | Sobic.002G259200 | POEI18 - Pollen Ole e I allergen and extensin family protein precursor, expressed | - |
| 15 | Sobic.006G172000 | pectinesterase, putative, expressed | - |
| 16 | Sobic.005G138000 | zinc knuckle domain containing protein, expressed | - |
| 17 | Sobic.002G286700 | lysM domain-containing GPI-anchored protein precursor, putative, expressed | - |
| 18 | Sobic.001G276800 | peptide transporter PTR2, putative, expressed | K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4 |
| 19 | Sobic.003G251700 | "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed | K14486: K14486, auxin response factor |
| 20 | Sobic.006G255300 | "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@auxin response factor, putative, expressed | K14486: K14486, auxin response factor |
Gene co-expression network
Octagon: transcription factors
© 2015- RIKEN, All rights reserved.
