Gene annotation
Transcriptome id Sobic.003G291000.3
Synonym Sb03g034160
Functional annotation protein kinase family protein, putative, expressed
UniProt A0A1W0VZE9
Pfam PF07714
Panther DB PTHR27001 PTHR27001:SF102
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G51940 : protein kinase family protein / peptidoglycan-binding LysM domain-containing protein
RAP-DB (Rice) LOC_Os01g53840.1 : protein kinase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a027654
Brachypodium KQK09656 , KQK09614
Barley HORVU3Hr1G070600.13 , HORVU3Hr1G070600.4 , HORVU3Hr1G070600.5 , HORVU3Hr1G070600.6 , HORVU3Hr1G070600.7 , HORVU3Hr1G070600.2 , HORVU3Hr1G070600.8 , HORVU3Hr1G070600.9 , HORVU3Hr1G070600.1 , HORVU3Hr1G070600.3 , HORVU3Hr1G070600.22 , HORVU3Hr1G070600.21 , HORVU3Hr1G070600.20 , HORVU3Hr1G070600.16 , HORVU3Hr1G070600.17 , HORVU3Hr1G070600.14 , HORVU3Hr1G070600.15 , HORVU3Hr1G070600.12 , HORVU3Hr1G070600.10 , HORVU3Hr1G070600.11 , HORVU3Hr1G070600.18 , HORVU3Hr1G070600.19
Wheat TraesCS3B02G310800 , TraesCS3D02G276800 , TraesCS3B02G310800 , TraesCS3A02G276600 , TraesCS3A02G276600
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G241800 receptor kinase, putative, expressed -
2 Sobic.002G311000 "Receptor-like kinase(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659859)@leucine-rich repeat family protein, putative, expressed -
3 Sobic.001G461800 zinc finger family protein, putative, expressed -
4 Sobic.001G074100 kinesin motor domain containing protein, putative, expressed K10401: kinesin family member 18/19
5 Sobic.002G045200 protein kinase, putative, expressed -
6 Sobic.003G078300 leucine-rich repeat protein-related, putative, expressed -
7 Sobic.010G211800 TKL_IRAK_CrRLK1L-1.14 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
8 Sobic.002G164700 ZOS9-04 - C2H2 zinc finger protein, expressed -
9 Sobic.003G250000 peroxidase family protein, expressed K00430: peroxidase
10 Sobic.001G381100 receptor-like protein kinase precursor, putative, expressed -
11 Sobic.004G164700 expressed protein -
12 Sobic.004G317200 "Upregulated to a greater extent than that of SbER1 in stem in response to drouht stress, not expredded in roots. SbER2 fusion protein localized on the cell membrane and chloroplast. Net photosynthetic rate and WUE, phenylpropanoid biosynthetic genes expression, and lignin content increased in overexpressing maize."(PubMedID : 31615416)@receptor-like protein kinase 5 precursor, putative, expressed -
13 Sobic.001G389600 expressed protein -
14 Sobic.003G018700 CIN-like (ClassII) Subclade 17 TCP(PubMedID : 21444336)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
15 Sobic.006G257200 kinesin motor domain containing protein, putative, expressed -
16 Sobic.003G376600 plant-specific domain TIGR01615 family protein, expressed -
17 Sobic.003G041900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed -
18 Sobic.010G020600 Receptor-like protein kinase 5 precursor(PubMedID : 28620409)@receptor-like protein kinase 5 precursor, putative, expressed -
19 Sobic.001G522300 leucine-rich repeat transmembrane protein kinase, putative, expressed -
20 Sobic.002G142500 expressed protein -


Gene co-expression network
sample Sobic003G291000 Sobic003G291000 Sobic006G241800 Sobic006G241800 Sobic003G291000--Sobic006G241800 Sobic002G311000 Sobic002G311000 Sobic003G291000--Sobic002G311000 Sobic001G461800 Sobic001G461800 Sobic003G291000--Sobic001G461800 Sobic001G074100 Sobic001G074100 Sobic003G291000--Sobic001G074100 Sobic002G045200 Sobic002G045200 Sobic003G291000--Sobic002G045200 Sobic003G078300 Sobic003G078300 Sobic003G291000--Sobic003G078300 Sobic010G211800 Sobic010G211800 Sobic003G291000--Sobic010G211800 Sobic002G164700 Sobic002G164700 Sobic003G291000--Sobic002G164700 Sobic003G250000 Sobic003G250000 Sobic003G291000--Sobic003G250000 Sobic006G241800--Sobic003G291000 Sobic003G018700 Sobic003G018700 Sobic006G241800--Sobic003G018700 Sobic004G317200 Sobic004G317200 Sobic006G241800--Sobic004G317200 Sobic004G164700 Sobic004G164700 Sobic006G241800--Sobic004G164700 Sobic010G024500 Sobic010G024500 Sobic006G241800--Sobic010G024500 Sobic006G241800--Sobic002G311000 Sobic010G020600 Sobic010G020600 Sobic006G241800--Sobic010G020600 Sobic001G381100 Sobic001G381100 Sobic006G241800--Sobic001G381100 Sobic006G241800--Sobic001G074100 Sobic002G311000--Sobic006G241800 Sobic002G311000--Sobic003G291000 Sobic002G311000--Sobic003G078300 Sobic002G142500 Sobic002G142500 Sobic002G311000--Sobic002G142500 Sobic002G311000--Sobic002G045200 Sobic002G311000--Sobic010G211800 Sobic002G311000--Sobic001G074100 Sobic010G165100 Sobic010G165100 Sobic002G311000--Sobic010G165100 Sobic006G257200 Sobic006G257200 Sobic002G311000--Sobic006G257200 Sobic001G461800--Sobic003G250000 Sobic001G461800--Sobic004G164700 Sobic001G461800--Sobic003G291000 Sobic002G286700 Sobic002G286700 Sobic001G461800--Sobic002G286700 Sobic008G190000 Sobic008G190000 Sobic001G461800--Sobic008G190000 Sobic001G461800--Sobic003G078300 Sobic004G253500 Sobic004G253500 Sobic001G461800--Sobic004G253500 Sobic001G461800--Sobic001G381100 Sobic001G461800--Sobic006G241800 Sobic001G074100--Sobic001G381100 Sobic003G031700 Sobic003G031700 Sobic001G074100--Sobic003G031700 Sobic002G362700 Sobic002G362700 Sobic001G074100--Sobic002G362700 Sobic001G074100--Sobic006G241800 Sobic001G074100--Sobic010G211800 Sobic001G074100--Sobic002G045200 Sobic001G074100--Sobic003G291000 Sobic009G124800 Sobic009G124800 Sobic001G074100--Sobic009G124800 Sobic010G211700 Sobic010G211700 Sobic001G074100--Sobic010G211700 Sobic001G389600 Sobic001G389600 Sobic002G045200--Sobic001G389600 Sobic002G045200--Sobic010G211800 Sobic002G045200--Sobic001G074100 Sobic002G045200--Sobic010G165100 Sobic002G045200--Sobic006G241800 Sobic001G522300 Sobic001G522300 Sobic002G045200--Sobic001G522300 Sobic002G045200--Sobic002G362700 Sobic002G045200--Sobic002G311000 Sobic002G045200--Sobic002G142500 Sobic003G078300--Sobic002G311000 Sobic003G078300--Sobic004G253500 Sobic003G078300--Sobic001G461800 Sobic003G078300--Sobic001G389600 Sobic003G078300--Sobic006G257200 Sobic003G078300--Sobic003G291000 Sobic003G078300--Sobic002G045200 Sobic003G078300--Sobic003G250000 Sobic003G078300--Sobic002G362700 Sobic010G211800--Sobic010G211700 Sobic002G360500 Sobic002G360500 Sobic010G211800--Sobic002G360500 Sobic002G417000 Sobic002G417000 Sobic010G211800--Sobic002G417000 Sobic010G211800--Sobic003G031700 Sobic010G211800--Sobic002G045200 Sobic010G211800--Sobic001G074100 Sobic010G211800--Sobic002G362700 Sobic010G211800--Sobic006G241800 Sobic008G096200 Sobic008G096200 Sobic010G211800--Sobic008G096200 Sobic002G164700--Sobic006G241800 Sobic002G164700--Sobic003G018700 Sobic006G032800 Sobic006G032800 Sobic002G164700--Sobic006G032800 Sobic002G164700--Sobic003G291000 Sobic010G107200 Sobic010G107200 Sobic002G164700--Sobic010G107200 Sobic002G164700--Sobic010G165100 Sobic009G154100 Sobic009G154100 Sobic002G164700--Sobic009G154100 Sobic002G164700--Sobic001G389600 Sobic006G233600 Sobic006G233600 Sobic002G164700--Sobic006G233600 Sobic003G250000--Sobic001G461800 Sobic003G250000--Sobic004G253500 Sobic004G269100 Sobic004G269100 Sobic003G250000--Sobic004G269100 Sobic003G250000--Sobic003G078300 Sobic009G002900 Sobic009G002900 Sobic003G250000--Sobic009G002900 Sobic003G250000--Sobic003G291000 Sobic003G250000--Sobic002G286700 Sobic003G259500 Sobic003G259500 Sobic003G250000--Sobic003G259500 Sobic002G259200 Sobic002G259200 Sobic003G250000--Sobic002G259200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.