Gene annotation
Transcriptome id Sobic.003G376600.2,Sobic.003G376600.1
Synonym Sb03g041650
Functional annotation plant-specific domain TIGR01615 family protein, expressed
UniProt A0A1W0W0U9 , A0A1W0W0U4
Pfam PF04720
Panther DB PTHR31579 PTHR31579:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G14620 : Protein of unknown function (DUF506)
RAP-DB (Rice) LOC_Os01g65740.1 : plant-specific domain TIGR01615 family protein, expressed
MaizeGDB (Corn) -
Brachypodium PNT73297
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G241800 receptor kinase, putative, expressed -
2 Sobic.003G291000 protein kinase family protein, putative, expressed -
3 Sobic.002G311000 "Receptor-like kinase(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659859)@leucine-rich repeat family protein, putative, expressed -
4 Sobic.001G461800 zinc finger family protein, putative, expressed -
5 Sobic.003G250000 peroxidase family protein, expressed K00430: peroxidase
6 Sobic.005G092700 expressed protein -
7 Sobic.002G164700 ZOS9-04 - C2H2 zinc finger protein, expressed -
8 Sobic.004G144100 - -
9 Sobic.003G018700 CIN-like (ClassII) Subclade 17 TCP(PubMedID : 21444336)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
10 Sobic.009G124800 zinc finger, C3HC4 type domain containing protein, expressed -
11 Sobic.004G269100 ATROPGEF7/ROPGEF7, putative, expressed -
12 Sobic.001G074100 kinesin motor domain containing protein, putative, expressed K10401: kinesin family member 18/19
13 Sobic.004G164700 expressed protein -
14 Sobic.010G020600 Receptor-like protein kinase 5 precursor(PubMedID : 28620409)@receptor-like protein kinase 5 precursor, putative, expressed -
15 Sobic.008G190000 leucine-rich repeat family protein, putative, expressed -
16 Sobic.004G317200 "Upregulated to a greater extent than that of SbER1 in stem in response to drouht stress, not expredded in roots. SbER2 fusion protein localized on the cell membrane and chloroplast. Net photosynthetic rate and WUE, phenylpropanoid biosynthetic genes expression, and lignin content increased in overexpressing maize."(PubMedID : 31615416)@receptor-like protein kinase 5 precursor, putative, expressed -
17 Sobic.009G154100 expressed protein -
18 Sobic.001G381100 receptor-like protein kinase precursor, putative, expressed -
19 Sobic.008G023401 - -
20 Sobic.006G257200 kinesin motor domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G376600 Sobic003G376600 Sobic006G241800 Sobic006G241800 Sobic003G376600--Sobic006G241800 Sobic003G291000 Sobic003G291000 Sobic003G376600--Sobic003G291000 Sobic002G311000 Sobic002G311000 Sobic003G376600--Sobic002G311000 Sobic001G461800 Sobic001G461800 Sobic003G376600--Sobic001G461800 Sobic003G250000 Sobic003G250000 Sobic003G376600--Sobic003G250000 Sobic005G092700 Sobic005G092700 Sobic003G376600--Sobic005G092700 Sobic002G164700 Sobic002G164700 Sobic003G376600--Sobic002G164700 Sobic004G144100 Sobic004G144100 Sobic003G376600--Sobic004G144100 Sobic003G018700 Sobic003G018700 Sobic003G376600--Sobic003G018700 Sobic006G241800--Sobic003G291000 Sobic006G241800--Sobic003G018700 Sobic004G317200 Sobic004G317200 Sobic006G241800--Sobic004G317200 Sobic004G164700 Sobic004G164700 Sobic006G241800--Sobic004G164700 Sobic010G024500 Sobic010G024500 Sobic006G241800--Sobic010G024500 Sobic006G241800--Sobic002G311000 Sobic010G020600 Sobic010G020600 Sobic006G241800--Sobic010G020600 Sobic001G381100 Sobic001G381100 Sobic006G241800--Sobic001G381100 Sobic001G074100 Sobic001G074100 Sobic006G241800--Sobic001G074100 Sobic003G291000--Sobic006G241800 Sobic003G291000--Sobic002G311000 Sobic003G291000--Sobic001G461800 Sobic003G291000--Sobic001G074100 Sobic002G045200 Sobic002G045200 Sobic003G291000--Sobic002G045200 Sobic003G078300 Sobic003G078300 Sobic003G291000--Sobic003G078300 Sobic010G211800 Sobic010G211800 Sobic003G291000--Sobic010G211800 Sobic003G291000--Sobic002G164700 Sobic003G291000--Sobic003G250000 Sobic002G311000--Sobic006G241800 Sobic002G311000--Sobic003G291000 Sobic002G311000--Sobic003G078300 Sobic002G142500 Sobic002G142500 Sobic002G311000--Sobic002G142500 Sobic002G311000--Sobic002G045200 Sobic002G311000--Sobic010G211800 Sobic002G311000--Sobic001G074100 Sobic010G165100 Sobic010G165100 Sobic002G311000--Sobic010G165100 Sobic006G257200 Sobic006G257200 Sobic002G311000--Sobic006G257200 Sobic001G461800--Sobic003G250000 Sobic001G461800--Sobic004G164700 Sobic001G461800--Sobic003G291000 Sobic002G286700 Sobic002G286700 Sobic001G461800--Sobic002G286700 Sobic008G190000 Sobic008G190000 Sobic001G461800--Sobic008G190000 Sobic001G461800--Sobic003G078300 Sobic004G253500 Sobic004G253500 Sobic001G461800--Sobic004G253500 Sobic001G461800--Sobic001G381100 Sobic001G461800--Sobic006G241800 Sobic003G250000--Sobic001G461800 Sobic003G250000--Sobic004G253500 Sobic004G269100 Sobic004G269100 Sobic003G250000--Sobic004G269100 Sobic003G250000--Sobic003G078300 Sobic009G002900 Sobic009G002900 Sobic003G250000--Sobic009G002900 Sobic003G250000--Sobic003G291000 Sobic003G250000--Sobic002G286700 Sobic003G259500 Sobic003G259500 Sobic003G250000--Sobic003G259500 Sobic002G259200 Sobic002G259200 Sobic003G250000--Sobic002G259200 Sobic005G092700--Sobic008G190000 Sobic008G042200 Sobic008G042200 Sobic005G092700--Sobic008G042200 Sobic009G200000 Sobic009G200000 Sobic005G092700--Sobic009G200000 Sobic004G115700 Sobic004G115700 Sobic005G092700--Sobic004G115700 Sobic003G366000 Sobic003G366000 Sobic005G092700--Sobic003G366000 Sobic005G092700--Sobic001G381100 Sobic001G160000 Sobic001G160000 Sobic005G092700--Sobic001G160000 Sobic001G390400 Sobic001G390400 Sobic005G092700--Sobic001G390400 Sobic001G075700 Sobic001G075700 Sobic005G092700--Sobic001G075700 Sobic002G164700--Sobic006G241800 Sobic002G164700--Sobic003G018700 Sobic006G032800 Sobic006G032800 Sobic002G164700--Sobic006G032800 Sobic002G164700--Sobic003G291000 Sobic010G107200 Sobic010G107200 Sobic002G164700--Sobic010G107200 Sobic002G164700--Sobic010G165100 Sobic009G154100 Sobic009G154100 Sobic002G164700--Sobic009G154100 Sobic001G389600 Sobic001G389600 Sobic002G164700--Sobic001G389600 Sobic006G233600 Sobic006G233600 Sobic002G164700--Sobic006G233600 Sobic002G216600 Sobic002G216600 Sobic004G144100--Sobic002G216600 Sobic004G144100--Sobic009G200000 Sobic006G262100 Sobic006G262100 Sobic004G144100--Sobic006G262100 Sobic001G395200 Sobic001G395200 Sobic004G144100--Sobic001G395200 Sobic008G048966 Sobic008G048966 Sobic004G144100--Sobic008G048966 Sobic006G201600 Sobic006G201600 Sobic004G144100--Sobic006G201600 Sobic008G001300 Sobic008G001300 Sobic004G144100--Sobic008G001300 Sobic007G142900 Sobic007G142900 Sobic004G144100--Sobic007G142900 Sobic002G002100 Sobic002G002100 Sobic004G144100--Sobic002G002100 Sobic003G018700--Sobic010G020600 Sobic003G018700--Sobic006G241800 Sobic004G248100 Sobic004G248100 Sobic003G018700--Sobic004G248100 Sobic003G018700--Sobic002G164700 Sobic003G018700--Sobic001G381100 Sobic003G018700--Sobic004G317200 Sobic003G018700--Sobic006G032800 Sobic006G044200 Sobic006G044200 Sobic003G018700--Sobic006G044200 Sobic003G018700--Sobic001G074100
Octagon: transcription factors


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