Gene annotation
Transcriptome id Sobic.004G219900.1
Synonym ATPPCK1, PPCK1 ;phosphoenolpyruvate carboxylase kinase, ATPPCK1, SbPPCK2, PPCK1, Sb04g026490
Functional annotation - (PubMedID : 26976818)
phosphorylation of leaf PEPC during C4 photosynthesis. (PubMedID : 16925599)
CAMK_CAMK_like.14 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt Q94EN6
Pfam PF07714
Panther DB PTHR24349 PTHR24349:SF136
NCBI CDD KOG0032; Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G08650 : phosphoenolpyruvate carboxylase kinase 1
RAP-DB (Rice) LOC_Os02g41580.1 : CAMK_CAMK_like.14 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a032027 , Zm00025a010719 , Zm00025a021105
Brachypodium KQJ83612 , KQK00410
Barley HORVU6Hr1G058780.2 , HORVU6Hr1G058780.1
Wheat TraesCS6D02G211900 , TraesCS6B02G257800 , TraesCS6A02G223500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G172900 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed K08237: hydroquinone glucosyltransferase
2 Sobic.008G178800 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative, expressed K00549: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
3 Sobic.007G130800 aldehyde dehydrogenase, putative, expressed K00130: betB, betaine-aldehyde dehydrogenase
4 Sobic.003G006866 - -
5 Sobic.010G258500 arogenate dehydrogenase 1, chloroplast precursor, putative, expressed -
6 Sobic.002G366500 anthocyanin 3-O-beta-glucosyltransferase, putative, expressed -
7 Sobic.002G075800 Up-reguralion under drought(PubMedID : 24916767)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
8 Sobic.001G173500 - -
9 Sobic.008G087500 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
10 Sobic.003G356000 "Expressed in drought, salt and oxidative stress"(PubMedID : 29862293)@Up-reguralion under drought(PubMedID : 24916767)@"an enzyme responsible for the ratelimiting step in proline biosynthesis, expressed at higher levels in the stay-green line, B35"(PubMedID : 26320239)@Delta 1-pyrroline-5-carboxylate synthase 2(PubMedID : 26320239)@Up-reguralion under drought(PubMedID : 24916767)@"an enzyme responsible for the ratelimiting step in proline biosynthesis, expressed at higher levels in the stay-green line, B35"(PubMedID : 26320239)@Delta 1-pyrroline-5-carboxylate synthase 2(PubMedID : 26320239)@The γ- glutamyl kinase activity of P5CS represents the rate-limiting step in this pathway and also features feedback inhibition by proline(PubMedID : 21958707)@amino acid kinase, putative, expressed K12657: ALDH18A1, delta-1-pyrroline-5-carboxylate synthetase
11 Sobic.006G074300 LTPL102 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.003G028000 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
13 Sobic.008G133200 GDSL-like lipase/acylhydrolase, putative, expressed -
14 Sobic.001G147300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@glyoxalase family protein, putative, expressed -
15 Sobic.007G195300 thioesterase family protein, putative, expressed K17362: acyl-coenzyme A thioesterase 13
16 Sobic.009G222000 LTPL153 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.003G131800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@major facilitator superfamily antiporter, putative, expressed -
18 Sobic.009G063400 "CESA1-like or CESA10-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@CESA1 - cellulose synthase, expressed K10999: cellulose synthase A
19 Sobic.003G327700 cysteine proteinase inhibitor (cystatin)(PubMedID : 8709954)@cysteine proteinase inhibitor precursor protein, putative, expressed -
20 Sobic.006G081000 protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1


Gene co-expression network
sample Sobic004G219900 Sobic004G219900 Sobic005G172900 Sobic005G172900 Sobic004G219900--Sobic005G172900 Sobic008G178800 Sobic008G178800 Sobic004G219900--Sobic008G178800 Sobic007G130800 Sobic007G130800 Sobic004G219900--Sobic007G130800 Sobic003G006866 Sobic003G006866 Sobic004G219900--Sobic003G006866 Sobic010G258500 Sobic010G258500 Sobic004G219900--Sobic010G258500 Sobic002G366500 Sobic002G366500 Sobic004G219900--Sobic002G366500 Sobic002G075800 Sobic002G075800 Sobic004G219900--Sobic002G075800 Sobic001G173500 Sobic001G173500 Sobic004G219900--Sobic001G173500 Sobic008G087500 Sobic008G087500 Sobic004G219900--Sobic008G087500 Sobic005G172900--Sobic004G219900 Sobic009G072200 Sobic009G072200 Sobic005G172900--Sobic009G072200 Sobic009G257700 Sobic009G257700 Sobic005G172900--Sobic009G257700 Sobic005G172900--Sobic002G075800 Sobic001G460300 Sobic001G460300 Sobic005G172900--Sobic001G460300 Sobic010G199900 Sobic010G199900 Sobic005G172900--Sobic010G199900 Sobic004G337900 Sobic004G337900 Sobic005G172900--Sobic004G337900 Sobic003G198200 Sobic003G198200 Sobic005G172900--Sobic003G198200 Sobic003G356000 Sobic003G356000 Sobic005G172900--Sobic003G356000 Sobic006G038200 Sobic006G038200 Sobic008G178800--Sobic006G038200 Sobic009G063400 Sobic009G063400 Sobic008G178800--Sobic009G063400 Sobic008G178800--Sobic010G258500 Sobic002G347300 Sobic002G347300 Sobic008G178800--Sobic002G347300 Sobic009G125900 Sobic009G125900 Sobic008G178800--Sobic009G125900 Sobic004G282700 Sobic004G282700 Sobic008G178800--Sobic004G282700 Sobic009G232200 Sobic009G232200 Sobic008G178800--Sobic009G232200 Sobic009G017500 Sobic009G017500 Sobic008G178800--Sobic009G017500 Sobic010G067500 Sobic010G067500 Sobic008G178800--Sobic010G067500 Sobic005G224500 Sobic005G224500 Sobic007G130800--Sobic005G224500 Sobic007G190200 Sobic007G190200 Sobic007G130800--Sobic007G190200 Sobic006G074300 Sobic006G074300 Sobic007G130800--Sobic006G074300 Sobic002G301200 Sobic002G301200 Sobic007G130800--Sobic002G301200 Sobic001G147300 Sobic001G147300 Sobic007G130800--Sobic001G147300 Sobic007G130800--Sobic008G178800 Sobic007G130800--Sobic010G258500 Sobic001G012200 Sobic001G012200 Sobic007G130800--Sobic001G012200 Sobic004G257700 Sobic004G257700 Sobic007G130800--Sobic004G257700 Sobic001G332966 Sobic001G332966 Sobic003G006866--Sobic001G332966 Sobic001G338000 Sobic001G338000 Sobic003G006866--Sobic001G338000 Sobic002G278800 Sobic002G278800 Sobic003G006866--Sobic002G278800 Sobic003G173700 Sobic003G173700 Sobic003G006866--Sobic003G173700 Sobic002G278700 Sobic002G278700 Sobic003G006866--Sobic002G278700 Sobic003G131800 Sobic003G131800 Sobic003G006866--Sobic003G131800 Sobic006G175700 Sobic006G175700 Sobic003G006866--Sobic006G175700 Sobic009G136500 Sobic009G136500 Sobic003G006866--Sobic009G136500 Sobic008G030700 Sobic008G030700 Sobic003G006866--Sobic008G030700 Sobic010G258500--Sobic008G178800 Sobic010G258500--Sobic006G038200 Sobic003G216500 Sobic003G216500 Sobic010G258500--Sobic003G216500 Sobic004G182500 Sobic004G182500 Sobic010G258500--Sobic004G182500 Sobic010G258500--Sobic009G232200 Sobic010G258500--Sobic007G130800 Sobic002G075500 Sobic002G075500 Sobic010G258500--Sobic002G075500 Sobic006G237200 Sobic006G237200 Sobic010G258500--Sobic006G237200 Sobic001G436100 Sobic001G436100 Sobic010G258500--Sobic001G436100 Sobic002G366500--Sobic006G074300 Sobic009G222000 Sobic009G222000 Sobic002G366500--Sobic009G222000 Sobic005G116500 Sobic005G116500 Sobic002G366500--Sobic005G116500 Sobic007G195300 Sobic007G195300 Sobic002G366500--Sobic007G195300 Sobic002G366500--Sobic005G224500 Sobic002G366500--Sobic002G278800 Sobic002G366500--Sobic002G278700 Sobic002G366500--Sobic003G131800 Sobic008G136500 Sobic008G136500 Sobic002G366500--Sobic008G136500 Sobic009G136700 Sobic009G136700 Sobic002G075800--Sobic009G136700 Sobic008G029300 Sobic008G029300 Sobic002G075800--Sobic008G029300 Sobic002G173800 Sobic002G173800 Sobic002G075800--Sobic002G173800 Sobic002G075800--Sobic003G356000 Sobic009G161800 Sobic009G161800 Sobic002G075800--Sobic009G161800 Sobic002G075800--Sobic003G131800 Sobic002G164960 Sobic002G164960 Sobic002G075800--Sobic002G164960 Sobic002G075800--Sobic008G087500 Sobic006G183200 Sobic006G183200 Sobic002G075800--Sobic006G183200 Sobic003G327700 Sobic003G327700 Sobic001G173500--Sobic003G327700 Sobic003G244200 Sobic003G244200 Sobic001G173500--Sobic003G244200 Sobic003G125701 Sobic003G125701 Sobic001G173500--Sobic003G125701 Sobic001G222600 Sobic001G222600 Sobic001G173500--Sobic001G222600 Sobic007G069200 Sobic007G069200 Sobic001G173500--Sobic007G069200 Sobic001G173500--Sobic001G147300 Sobic006G084400 Sobic006G084400 Sobic001G173500--Sobic006G084400 Sobic001G012600 Sobic001G012600 Sobic001G173500--Sobic001G012600 Sobic001G173500--Sobic001G012200 Sobic010G146500 Sobic010G146500 Sobic008G087500--Sobic010G146500 Sobic003G244100 Sobic003G244100 Sobic008G087500--Sobic003G244100 Sobic008G087500--Sobic002G164960 Sobic006G116801 Sobic006G116801 Sobic008G087500--Sobic006G116801 Sobic001G424000 Sobic001G424000 Sobic008G087500--Sobic001G424000 Sobic001G409400 Sobic001G409400 Sobic008G087500--Sobic001G409400 Sobic008G087500--Sobic002G075800 Sobic004G101400 Sobic004G101400 Sobic008G087500--Sobic004G101400 Sobic008G087800 Sobic008G087800 Sobic008G087500--Sobic008G087800
Octagon: transcription factors


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