Gene annotation
Transcriptome id Sobic.003G327700.2,Sobic.003G327700.1
Synonym ATCYSB, Sb03g037370, CYSB, ATCYS6, SbCPI1
Functional annotation cysteine proteinase inhibitor (cystatin) (PubMedID : 8709954)
cysteine proteinase inhibitor precursor protein, putative, expressed
UniProt Q41294 , A0A1B6Q6M7
Pfam PF16845
Panther DB PTHR11413 PTHR11413:SF56
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0004869; cysteine-type endopeptidase inhibitor activity


Orthologs (automatic annotation)
TAIR AT3G12490 : cystatin B
RAP-DB (Rice) LOC_Os01g58890.1,LOC_Os01g58890.2 : cysteine proteinase inhibitor precursor protein, putative, expressed
MaizeGDB (Corn) Zm00025a027174 , Zm00025a039829
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G327700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G173500 - -
2 Sobic.001G363700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
3 Sobic.001G147300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@glyoxalase family protein, putative, expressed -
4 Sobic.003G131800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@major facilitator superfamily antiporter, putative, expressed -
5 Sobic.008G136500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
6 Sobic.003G007800 phosphorylase domain containing protein, putative, expressed -
7 Sobic.006G175700 down-regulated TF in developmental senescence(PubMedID : 27586543)@putative basic helix-loop-helix (bHLH) transcription factor(PubmedID : 24048646)@anthocyanin regulatory Lc protein, putative, expressed -
8 Sobic.008G189500 similar to Secretory acid phosphatase - Pfam Calcineurin-like phosphoesterase(PubMedID : 24655390)@similar to Secretory acid phosphatase - Pfam Calcineurin -like phosphoesterase(PubMedID : 24655390)@Ser/Thr protein phosphatase family protein, putative, expressed -
9 Sobic.005G190800 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed K05928: tocopherol O-methyltransferase
10 Sobic.001G472000 Polyamine oxidase 1("PubMedID : 26759170,PubMedID : 24597475")@amine oxidase, flavin-containing, domain containing protein, expressed K13366: MPAO, polyamine oxidase
11 Sobic.009G070700 Acid phosphatase class B family protein(PubMedID : 26320239)@HAD superfamily phosphatase, putative, expressed -
12 Sobic.002G278700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ribonuclease T2 family domain containing protein, expressed K01166: ribonuclease T2
13 Sobic.002G278800 ribonuclease T2 family domain containing protein, expressed K01166: ribonuclease T2
14 Sobic.001G249500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.005G029400 strictosidine synthase, putative, expressed -
16 Sobic.008G030700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@LTPL7 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.004G257700 aspartic proteinase nepenthesin-1 precursor, putative, expressed -
18 Sobic.002G128600 lecithin:cholesterol acyltransferase, putative, expressed K06129: lysophospholipase III
19 Sobic.004G151600 fruit protein PKIWI502, putative, expressed -
20 Sobic.009G033200 IN2-1 protein, putative, expressed K00799: GST, glutathione S-transferase


Gene co-expression network
sample Sobic003G327700 Sobic003G327700 Sobic001G173500 Sobic001G173500 Sobic003G327700--Sobic001G173500 Sobic001G363700 Sobic001G363700 Sobic003G327700--Sobic001G363700 Sobic001G147300 Sobic001G147300 Sobic003G327700--Sobic001G147300 Sobic003G131800 Sobic003G131800 Sobic003G327700--Sobic003G131800 Sobic008G136500 Sobic008G136500 Sobic003G327700--Sobic008G136500 Sobic003G007800 Sobic003G007800 Sobic003G327700--Sobic003G007800 Sobic006G175700 Sobic006G175700 Sobic003G327700--Sobic006G175700 Sobic008G189500 Sobic008G189500 Sobic003G327700--Sobic008G189500 Sobic005G190800 Sobic005G190800 Sobic003G327700--Sobic005G190800 Sobic001G173500--Sobic003G327700 Sobic003G244200 Sobic003G244200 Sobic001G173500--Sobic003G244200 Sobic003G125701 Sobic003G125701 Sobic001G173500--Sobic003G125701 Sobic001G222600 Sobic001G222600 Sobic001G173500--Sobic001G222600 Sobic007G069200 Sobic007G069200 Sobic001G173500--Sobic007G069200 Sobic001G173500--Sobic001G147300 Sobic006G084400 Sobic006G084400 Sobic001G173500--Sobic006G084400 Sobic001G012600 Sobic001G012600 Sobic001G173500--Sobic001G012600 Sobic001G012200 Sobic001G012200 Sobic001G173500--Sobic001G012200 Sobic001G363700--Sobic008G189500 Sobic005G029400 Sobic005G029400 Sobic001G363700--Sobic005G029400 Sobic002G128600 Sobic002G128600 Sobic001G363700--Sobic002G128600 Sobic007G146350 Sobic007G146350 Sobic001G363700--Sobic007G146350 Sobic001G363700--Sobic003G007800 Sobic002G207900 Sobic002G207900 Sobic001G363700--Sobic002G207900 Sobic003G287000 Sobic003G287000 Sobic001G363700--Sobic003G287000 Sobic001G249500 Sobic001G249500 Sobic001G363700--Sobic001G249500 Sobic001G255300 Sobic001G255300 Sobic001G363700--Sobic001G255300 Sobic001G147300--Sobic003G327700 Sobic007G130800 Sobic007G130800 Sobic001G147300--Sobic007G130800 Sobic001G147300--Sobic001G173500 Sobic005G224500 Sobic005G224500 Sobic001G147300--Sobic005G224500 Sobic002G301200 Sobic002G301200 Sobic001G147300--Sobic002G301200 Sobic002G366500 Sobic002G366500 Sobic001G147300--Sobic002G366500 Sobic009G033200 Sobic009G033200 Sobic001G147300--Sobic009G033200 Sobic006G161900 Sobic006G161900 Sobic001G147300--Sobic006G161900 Sobic001G147300--Sobic007G069200 Sobic002G278700 Sobic002G278700 Sobic003G131800--Sobic002G278700 Sobic002G278800 Sobic002G278800 Sobic003G131800--Sobic002G278800 Sobic008G030700 Sobic008G030700 Sobic003G131800--Sobic008G030700 Sobic003G131800--Sobic006G175700 Sobic007G195300 Sobic007G195300 Sobic003G131800--Sobic007G195300 Sobic010G012400 Sobic010G012400 Sobic003G131800--Sobic010G012400 Sobic003G173700 Sobic003G173700 Sobic003G131800--Sobic003G173700 Sobic003G131800--Sobic001G249500 Sobic009G136500 Sobic009G136500 Sobic003G131800--Sobic009G136500 Sobic008G136500--Sobic003G007800 Sobic008G136500--Sobic005G190800 Sobic008G136500--Sobic003G131800 Sobic008G136500--Sobic006G175700 Sobic005G036500 Sobic005G036500 Sobic008G136500--Sobic005G036500 Sobic001G338000 Sobic001G338000 Sobic008G136500--Sobic001G338000 Sobic008G136500--Sobic008G189500 Sobic008G136500--Sobic003G327700 Sobic008G136500--Sobic002G128600 Sobic003G007800--Sobic008G189500 Sobic003G007800--Sobic001G255300 Sobic003G007800--Sobic005G190800 Sobic003G007800--Sobic006G175700 Sobic004G328900 Sobic004G328900 Sobic003G007800--Sobic004G328900 Sobic003G317800 Sobic003G317800 Sobic003G007800--Sobic003G317800 Sobic003G007800--Sobic002G128600 Sobic003G007800--Sobic005G029400 Sobic004G038300 Sobic004G038300 Sobic003G007800--Sobic004G038300 Sobic006G175700--Sobic005G190800 Sobic006G175700--Sobic008G030700 Sobic006G175700--Sobic002G278800 Sobic006G175700--Sobic003G007800 Sobic006G175700--Sobic001G249500 Sobic006G175700--Sobic001G338000 Sobic006G175700--Sobic002G128600 Sobic006G175700--Sobic003G131800 Sobic006G175700--Sobic002G278700 Sobic008G189500--Sobic003G007800 Sobic001G472000 Sobic001G472000 Sobic008G189500--Sobic001G472000 Sobic008G189500--Sobic001G255300 Sobic008G189500--Sobic005G029400 Sobic009G070600 Sobic009G070600 Sobic008G189500--Sobic009G070600 Sobic008G189500--Sobic004G328900 Sobic008G189500--Sobic003G317800 Sobic001G379300 Sobic001G379300 Sobic008G189500--Sobic001G379300 Sobic008G189500--Sobic002G128600 Sobic005G190800--Sobic006G175700 Sobic005G190800--Sobic002G128600 Sobic005G190800--Sobic003G007800 Sobic006G227000 Sobic006G227000 Sobic005G190800--Sobic006G227000 Sobic005G190800--Sobic001G249500 Sobic005G190800--Sobic003G317800 Sobic005G190800--Sobic004G038300 Sobic005G190800--Sobic004G328900 Sobic007G069500 Sobic007G069500 Sobic005G190800--Sobic007G069500
Octagon: transcription factors


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