Gene annotation
| Transcriptome id | Sobic.005G172900.1 |
|---|---|
| Synonym | Sb05g023240, GT72B1, UGT72B1 |
| Functional annotation | UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed |
| UniProt | C5Y5H1 |
| Pfam | PF00201 |
| Panther DB | PTHR11926 PTHR11926:SF381 |
| NCBI CDD | - |
| KEGG Orthology | K08237; hydroquinone glucosyltransferase |
| Gene Ontology | GO:0016758; transferase activity, transferring hexosyl groups GO:0008152metabolic process |
Orthologs (automatic annotation)
| TAIR | AT4G01070 : UDP-Glycosyltransferase superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os11g38650.1 : UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a029458 , Zm00025a029202 , Zm00025a015772 |
| Brachypodium | KQJ87942 |
| Barley | HORVU6Hr1G014570.1 , HORVU3Hr1G004850.2 , HORVU3Hr1G004850.3 , HORVU3Hr1G004850.1 , HORVU3Hr1G004850.4 |
| Wheat | TraesCS3A02G010300 |
| Populus | - |
JBrowse
| Sobic.005G172900 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.004G219900 | -(PubMedID : 26976818)@phosphorylation of leaf PEPC during C4 photosynthesis.(PubMedID : 16925599)@CAMK_CAMK_like.14 - CAMK includes calcium/calmodulin depedent protein kinases, expressed | - |
| 2 | Sobic.009G072200 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Myb transcription factor, putative, expressed | - |
| 3 | Sobic.009G257700 | N-rich protein, putative, expressed | - |
| 4 | Sobic.002G075800 | Up-reguralion under drought(PubMedID : 24916767)@uncharacterized glycosyltransferase, putative, expressed | K06617: raffinose synthase |
| 5 | Sobic.001G460300 | expressed protein | - |
| 6 | Sobic.010G199900 | extracellular ligand-gated ion channel, putative, expressed | - |
| 7 | Sobic.004G337900 | ENTH domain containing protein, expressed | K12471: epsin |
| 8 | Sobic.003G198200 | "similar to Protein phosphatase 2C, expressed in 4 stresses, namely drought, salt, cold and heat"(PubMedID : 29862293)@Negative regulator of ABA(PubMedID : 30367619)@protein phosphatase 2C, putative, expressed | K14497: protein phosphatase 2C |
| 9 | Sobic.003G356000 | "Expressed in drought, salt and oxidative stress"(PubMedID : 29862293)@Up-reguralion under drought(PubMedID : 24916767)@"an enzyme responsible for the ratelimiting step in proline biosynthesis, expressed at higher levels in the stay-green line, B35"(PubMedID : 26320239)@Delta 1-pyrroline-5-carboxylate synthase 2(PubMedID : 26320239)@Up-reguralion under drought(PubMedID : 24916767)@"an enzyme responsible for the ratelimiting step in proline biosynthesis, expressed at higher levels in the stay-green line, B35"(PubMedID : 26320239)@Delta 1-pyrroline-5-carboxylate synthase 2(PubMedID : 26320239)@The γ- glutamyl kinase activity of P5CS represents the rate-limiting step in this pathway and also features feedback inhibition by proline(PubMedID : 21958707)@amino acid kinase, putative, expressed | K12657: ALDH18A1, delta-1-pyrroline-5-carboxylate synthetase |
| 10 | Sobic.002G148700 | Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@heavy metal transport/detoxification protein, putative, expressed | - |
| 11 | Sobic.006G064800 | heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed | - |
| 12 | Sobic.002G173800 | hydroxyproline-rich glycoprotein family protein, putative, expressed | - |
| 13 | Sobic.010G046700 | ABC transporter, ATP-binding protein, putative, expressed | - |
| 14 | Sobic.003G105700 | stress responsive protein, putative, expressed | - |
| 15 | Sobic.009G099000 | peptide transporter PTR2, putative, expressed | K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4 |
| 16 | Sobic.003G336100 | auxin efflux carrier component, putative, expressed | - |
| 17 | Sobic.007G152800 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Glutamate decarboxylase("PubMedID : 26759170,PubMedID : 24597475")@decarboxylase, putative, expressed | K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase |
| 18 | Sobic.003G203500 | "cinnamoyl-CoA reductase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aldehyde dehydrogenase, putative, expressed | K12355: coniferyl-aldehyde dehydrogenase |
| 19 | Sobic.001G127800 | nuclear transcription factor Y subunit, putative, expressed | K08064: NFYA, nuclear transcription factor Y, alpha |
| 20 | Sobic.004G255700 | sucrase-related, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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