Gene annotation
Transcriptome id Sobic.002G148700.2,Sobic.002G148700.1
Synonym Sb02g017220,
Functional annotation Up-reguralion under heat (PubMedID : 24916767)
Up-reguralion under combine stress of drought and heat (PubMedID : 24916767)
Up-reguralion under heat (PubMedID : 24916767)
Up-reguralion under combine stress of drought and heat (PubMedID : 24916767)
heavy metal transport/detoxification protein, putative, expressed
UniProt A0A1B6QBH0 , A0A1B6QBD1
Pfam -
Panther DB PTHR22814 PTHR22814:SF147
NCBI CDD KOG1603; Copper chaperone
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07600 : Heavy metal transport/detoxification superfamily protein
RAP-DB (Rice) LOC_Os09g09930.1 : heavy metal transport/detoxification protein, putative, expressed
MaizeGDB (Corn) Zm00025a046240
Brachypodium KQJ89642 , KQJ89641
Barley HORVU5Hr1G052730.1 , HORVU5Hr1G052740.3 , HORVU5Hr1G052740.2 , HORVU5Hr1G052740.1
Wheat TraesCS5B02G169200 , TraesCS5A02G171800 , TraesCS5D02G176600 , TraesCS5D02G176600 , TraesCS5D02G176500 , TraesCS5D02G176500 , TraesCS5A02G171700 , TraesCS5B02G169300
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G170032 - -
2 Sobic.003G036600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-related transcription activator, putative, expressed -
3 Sobic.003G198150 - -
4 Sobic.010G260300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.003G198200 "similar to Protein phosphatase 2C, expressed in 4 stresses, namely drought, salt, cold and heat"(PubMedID : 29862293)@Negative regulator of ABA(PubMedID : 30367619)@protein phosphatase 2C, putative, expressed K14497: protein phosphatase 2C
6 Sobic.002G110200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
7 Sobic.003G233900 - -
8 Sobic.002G189000 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
9 Sobic.002G013900 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed -
10 Sobic.003G397500 expressed protein -
11 Sobic.004G155150 - -
12 Sobic.004G211301 - -
13 Sobic.004G257350 - -
14 Sobic.006G220200 CPuORF12 - conserved peptide uORF-containing transcript, expressed K17839: PAO4, PAO3, polyamine oxidase
15 Sobic.009G128300 CUE domain containing protein, expressed -
16 Sobic.003G227600 CPuORF29 - conserved peptide uORF-containing transcript, expressed -
17 Sobic.001G005700 acyl carrier protein, putative, expressed -
18 Sobic.003G402550 - -
19 Sobic.002G331450 - -
20 Sobic.003G252400 drought induced 19 protein, putative, expressed -


Gene co-expression network
sample Sobic002G148700 Sobic002G148700 Sobic004G170032 Sobic004G170032 Sobic002G148700--Sobic004G170032 Sobic003G036600 Sobic003G036600 Sobic002G148700--Sobic003G036600 Sobic003G198150 Sobic003G198150 Sobic002G148700--Sobic003G198150 Sobic010G260300 Sobic010G260300 Sobic002G148700--Sobic010G260300 Sobic003G198200 Sobic003G198200 Sobic002G148700--Sobic003G198200 Sobic002G110200 Sobic002G110200 Sobic002G148700--Sobic002G110200 Sobic003G233900 Sobic003G233900 Sobic002G148700--Sobic003G233900 Sobic002G189000 Sobic002G189000 Sobic002G148700--Sobic002G189000 Sobic002G013900 Sobic002G013900 Sobic002G148700--Sobic002G013900 Sobic004G170032--Sobic002G110200 Sobic002G182800 Sobic002G182800 Sobic004G170032--Sobic002G182800 Sobic009G128300 Sobic009G128300 Sobic004G170032--Sobic009G128300 Sobic002G331450 Sobic002G331450 Sobic004G170032--Sobic002G331450 Sobic001G075101 Sobic001G075101 Sobic004G170032--Sobic001G075101 Sobic007G169600 Sobic007G169600 Sobic004G170032--Sobic007G169600 Sobic004G170032--Sobic003G198150 Sobic001G509400 Sobic001G509400 Sobic004G170032--Sobic001G509400 Sobic003G227600 Sobic003G227600 Sobic004G170032--Sobic003G227600 Sobic003G036600--Sobic002G148700 Sobic005G087900 Sobic005G087900 Sobic003G036600--Sobic005G087900 Sobic001G521500 Sobic001G521500 Sobic003G036600--Sobic001G521500 Sobic003G036600--Sobic010G260300 Sobic009G079300 Sobic009G079300 Sobic003G036600--Sobic009G079300 Sobic003G397500 Sobic003G397500 Sobic003G036600--Sobic003G397500 Sobic001G409300 Sobic001G409300 Sobic003G036600--Sobic001G409300 Sobic003G252400 Sobic003G252400 Sobic003G036600--Sobic003G252400 Sobic002G229600 Sobic002G229600 Sobic003G036600--Sobic002G229600 Sobic008G044750 Sobic008G044750 Sobic003G198150--Sobic008G044750 Sobic003G198150--Sobic003G198200 Sobic003G198150--Sobic009G128300 Sobic003G198150--Sobic001G509400 Sobic003G079800 Sobic003G079800 Sobic003G198150--Sobic003G079800 Sobic003G198150--Sobic003G227600 Sobic003G198150--Sobic004G170032 Sobic003G198150--Sobic003G233900 Sobic001G450800 Sobic001G450800 Sobic003G198150--Sobic001G450800 Sobic010G260300--Sobic002G189000 Sobic003G229000 Sobic003G229000 Sobic010G260300--Sobic003G229000 Sobic009G183000 Sobic009G183000 Sobic010G260300--Sobic009G183000 Sobic007G025800 Sobic007G025800 Sobic010G260300--Sobic007G025800 Sobic002G271100 Sobic002G271100 Sobic010G260300--Sobic002G271100 Sobic003G225900 Sobic003G225900 Sobic010G260300--Sobic003G225900 Sobic004G155150 Sobic004G155150 Sobic010G260300--Sobic004G155150 Sobic010G260300--Sobic003G233900 Sobic010G260300--Sobic003G198150 Sobic003G198200--Sobic003G198150 Sobic003G198200--Sobic004G170032 Sobic003G198200--Sobic001G450800 Sobic003G198200--Sobic002G148700 Sobic003G198200--Sobic003G227600 Sobic004G337900 Sobic004G337900 Sobic003G198200--Sobic004G337900 Sobic008G029300 Sobic008G029300 Sobic003G198200--Sobic008G029300 Sobic004G353600 Sobic004G353600 Sobic003G198200--Sobic004G353600 Sobic002G387200 Sobic002G387200 Sobic003G198200--Sobic002G387200 Sobic002G110200--Sobic002G331450 Sobic002G110200--Sobic001G075101 Sobic006G203000 Sobic006G203000 Sobic002G110200--Sobic006G203000 Sobic002G110200--Sobic007G169600 Sobic002G110200--Sobic009G128300 Sobic002G110200--Sobic002G182800 Sobic002G110200--Sobic002G013900 Sobic002G110200--Sobic001G509400 Sobic002G110200--Sobic004G170032 Sobic003G233900--Sobic009G128300 Sobic003G233900--Sobic003G227600 Sobic003G233900--Sobic002G182800 Sobic003G040800 Sobic003G040800 Sobic003G233900--Sobic003G040800 Sobic009G000700 Sobic009G000700 Sobic003G233900--Sobic009G000700 Sobic009G216900 Sobic009G216900 Sobic003G233900--Sobic009G216900 Sobic004G257350 Sobic004G257350 Sobic003G233900--Sobic004G257350 Sobic003G066900 Sobic003G066900 Sobic003G233900--Sobic003G066900 Sobic004G285100 Sobic004G285100 Sobic003G233900--Sobic004G285100 Sobic002G189000--Sobic002G013900 Sobic002G189000--Sobic003G233900 Sobic002G189000--Sobic002G271100 Sobic002G189000--Sobic010G260300 Sobic002G189000--Sobic009G128300 Sobic002G189000--Sobic002G110200 Sobic002G189000--Sobic003G225900 Sobic002G189000--Sobic004G155150 Sobic002G189000--Sobic004G285100 Sobic002G013900--Sobic003G233900 Sobic002G013900--Sobic009G128300 Sobic002G013900--Sobic002G110200 Sobic002G013900--Sobic002G189000 Sobic002G013900--Sobic002G182800 Sobic002G013900--Sobic002G331450 Sobic002G013900--Sobic003G227600 Sobic010G085400 Sobic010G085400 Sobic002G013900--Sobic010G085400 Sobic002G013900--Sobic003G040800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.