Gene annotation
Transcriptome id Sobic.001G005700.1
Synonym Sb01g000610, ACP1, ACP
Functional annotation acyl carrier protein, putative, expressed
UniProt C5WRY1
Pfam PF00550
Panther DB PTHR20863:SF34 PTHR20863
NCBI CDD KOG1748; Acyl carrier protein/NADH-ubiquinone oxidoreductase, NDUFAB1/SDAP subunit
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G05020 : acyl carrier protein 1
RAP-DB (Rice) LOC_Os03g63930.1 : acyl carrier protein, putative, expressed
MaizeGDB (Corn) Zm00025a016297
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G211301 - -
2 Sobic.002G189000 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
3 Sobic.010G085400 down-regulated TF in developmental senescence(PubMedID : 27586543)@OsMADS22 - MADS-box family gene with MIKCc type-box, expressed -
4 Sobic.009G128300 CUE domain containing protein, expressed -
5 Sobic.002G013900 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed -
6 Sobic.003G227600 CPuORF29 - conserved peptide uORF-containing transcript, expressed -
7 Sobic.009G216900 down-regulated TF in developmental senescence(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
8 Sobic.003G233900 - -
9 Sobic.003G225900 expressed protein -
10 Sobic.002G182800 expressed protein -
11 Sobic.002G110200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
12 Sobic.003G087100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.003G252400 drought induced 19 protein, putative, expressed -
14 Sobic.003G040800 WRKY102, expressed -
15 Sobic.002G331450 - -
16 Sobic.004G155150 - -
17 Sobic.009G136100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@auxin-induced protein 5NG4, putative, expressed -
18 Sobic.004G257350 - -
19 Sobic.010G260300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.002G342100 no apical meristem protein, putative, expressed -


Gene co-expression network
sample Sobic001G005700 Sobic001G005700 Sobic004G211301 Sobic004G211301 Sobic001G005700--Sobic004G211301 Sobic002G189000 Sobic002G189000 Sobic001G005700--Sobic002G189000 Sobic010G085400 Sobic010G085400 Sobic001G005700--Sobic010G085400 Sobic009G128300 Sobic009G128300 Sobic001G005700--Sobic009G128300 Sobic002G013900 Sobic002G013900 Sobic001G005700--Sobic002G013900 Sobic003G227600 Sobic003G227600 Sobic001G005700--Sobic003G227600 Sobic009G216900 Sobic009G216900 Sobic001G005700--Sobic009G216900 Sobic003G233900 Sobic003G233900 Sobic001G005700--Sobic003G233900 Sobic003G225900 Sobic003G225900 Sobic001G005700--Sobic003G225900 Sobic002G331450 Sobic002G331450 Sobic004G211301--Sobic002G331450 Sobic004G211301--Sobic009G128300 Sobic003G252400 Sobic003G252400 Sobic004G211301--Sobic003G252400 Sobic004G211301--Sobic010G085400 Sobic005G060600 Sobic005G060600 Sobic004G211301--Sobic005G060600 Sobic002G182800 Sobic002G182800 Sobic004G211301--Sobic002G182800 Sobic004G211301--Sobic003G233900 Sobic002G110200 Sobic002G110200 Sobic004G211301--Sobic002G110200 Sobic004G211301--Sobic002G013900 Sobic002G189000--Sobic002G013900 Sobic002G189000--Sobic003G233900 Sobic002G271100 Sobic002G271100 Sobic002G189000--Sobic002G271100 Sobic010G260300 Sobic010G260300 Sobic002G189000--Sobic010G260300 Sobic002G189000--Sobic009G128300 Sobic002G189000--Sobic002G110200 Sobic002G189000--Sobic003G225900 Sobic004G155150 Sobic004G155150 Sobic002G189000--Sobic004G155150 Sobic004G285100 Sobic004G285100 Sobic002G189000--Sobic004G285100 Sobic010G085400--Sobic002G182800 Sobic010G085400--Sobic002G331450 Sobic010G085400--Sobic009G128300 Sobic003G040800 Sobic003G040800 Sobic010G085400--Sobic003G040800 Sobic010G085400--Sobic002G110200 Sobic010G085400--Sobic002G013900 Sobic010G085400--Sobic004G211301 Sobic010G085400--Sobic003G233900 Sobic007G169600 Sobic007G169600 Sobic010G085400--Sobic007G169600 Sobic009G128300--Sobic002G182800 Sobic009G128300--Sobic003G233900 Sobic009G128300--Sobic003G227600 Sobic001G509400 Sobic001G509400 Sobic009G128300--Sobic001G509400 Sobic002G342100 Sobic002G342100 Sobic009G128300--Sobic002G342100 Sobic009G128300--Sobic002G331450 Sobic008G044750 Sobic008G044750 Sobic009G128300--Sobic008G044750 Sobic003G079800 Sobic003G079800 Sobic009G128300--Sobic003G079800 Sobic001G075101 Sobic001G075101 Sobic009G128300--Sobic001G075101 Sobic002G013900--Sobic003G233900 Sobic002G013900--Sobic009G128300 Sobic002G013900--Sobic002G110200 Sobic002G013900--Sobic002G189000 Sobic002G013900--Sobic002G182800 Sobic002G013900--Sobic002G331450 Sobic002G013900--Sobic003G227600 Sobic002G013900--Sobic010G085400 Sobic002G013900--Sobic003G040800 Sobic003G227600--Sobic009G128300 Sobic003G227600--Sobic009G216900 Sobic003G227600--Sobic003G233900 Sobic003G227600--Sobic002G182800 Sobic003G227600--Sobic003G040800 Sobic003G227600--Sobic002G342100 Sobic003G227600--Sobic001G509400 Sobic003G227600--Sobic001G075101 Sobic003G227600--Sobic002G331450 Sobic009G216900--Sobic003G227600 Sobic009G216900--Sobic003G233900 Sobic009G216900--Sobic009G128300 Sobic009G216900--Sobic003G040800 Sobic009G216900--Sobic002G182800 Sobic009G216900--Sobic002G342100 Sobic009G216900--Sobic001G509400 Sobic009G216900--Sobic004G285100 Sobic009G216900--Sobic003G079800 Sobic003G233900--Sobic009G128300 Sobic003G233900--Sobic003G227600 Sobic003G233900--Sobic002G182800 Sobic003G233900--Sobic003G040800 Sobic009G000700 Sobic009G000700 Sobic003G233900--Sobic009G000700 Sobic003G233900--Sobic009G216900 Sobic004G257350 Sobic004G257350 Sobic003G233900--Sobic004G257350 Sobic003G066900 Sobic003G066900 Sobic003G233900--Sobic003G066900 Sobic003G233900--Sobic004G285100 Sobic006G267900 Sobic006G267900 Sobic003G225900--Sobic006G267900 Sobic003G225900--Sobic002G189000 Sobic003G225900--Sobic002G271100 Sobic002G427400 Sobic002G427400 Sobic003G225900--Sobic002G427400 Sobic003G373150 Sobic003G373150 Sobic003G225900--Sobic003G373150 Sobic001G081600 Sobic001G081600 Sobic003G225900--Sobic001G081600 Sobic003G225900--Sobic010G260300 Sobic005G087800 Sobic005G087800 Sobic003G225900--Sobic005G087800 Sobic004G283201 Sobic004G283201 Sobic003G225900--Sobic004G283201
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.