Gene annotation
Transcriptome id Sobic.001G127800.1,Sobic.001G127800.2,Sobic.001G127800.3
Synonym Sb01g011220, NF-YA7
Functional annotation nuclear transcription factor Y subunit, putative, expressed
UniProt A0A1B6QIQ0 , A0A1B6QIQ6
Pfam PF02045
Panther DB PTHR12632 PTHR12632:SF13
NCBI CDD -
KEGG Orthology K08064; NFYA, nuclear transcription factor Y, alpha
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT5G12840 : nuclear factor Y, subunit A7,nuclear factor Y, subunit A1
RAP-DB (Rice) LOC_Os03g48970.1,LOC_Os03g48970.3,LOC_Os03g48970.2 : nuclear transcription factor Y subunit, putative, expressed
MaizeGDB (Corn) Zm00025a007699
Brachypodium KQK13681 , KQK13680 , PNT74278 , KQK13679
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G127800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G121200 "similar to HVA22-like protein e, putative, expressed"(PubMedID : 29862293)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
2 Sobic.010G165200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.007G152800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Glutamate decarboxylase("PubMedID : 26759170,PubMedID : 24597475")@decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
4 Sobic.002G337800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
5 Sobic.009G072200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Myb transcription factor, putative, expressed -
6 Sobic.009G073000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsGrx_C15 - glutaredoxin subgroup III, expressed -
7 Sobic.001G342600 PDI, putative, expressed K17609: nucleoredoxin
8 Sobic.006G064800 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed -
9 Sobic.003G209600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphoethanolamine/phosphocholine phosphatase, putative, expressed K13248: pyridoxal phosphate phosphatase PHOSPHO2
10 Sobic.001G048900 EF hand family protein, putative, expressed -
11 Sobic.003G336100 auxin efflux carrier component, putative, expressed -
12 Sobic.001G460300 expressed protein -
13 Sobic.003G278700 heavy metal-associated domain containing protein, expressed -
14 Sobic.009G257700 N-rich protein, putative, expressed -
15 Sobic.005G195600 adenylyl-sulfate kinase, putative, expressed K00860: adenylylsulfate kinase
16 Sobic.003G367300 actin, putative, expressed K10355: actin, other eukaryote
17 Sobic.006G191100 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
18 Sobic.001G396400 expressed protein -
19 Sobic.007G054500 ABC-2 type transporter domain containing protein, expressed -
20 Sobic.009G030200 homeobox protein knotted-1-like 6, putative, expressed -


Gene co-expression network
sample Sobic001G127800 Sobic001G127800 Sobic005G121200 Sobic005G121200 Sobic001G127800--Sobic005G121200 Sobic010G165200 Sobic010G165200 Sobic001G127800--Sobic010G165200 Sobic007G152800 Sobic007G152800 Sobic001G127800--Sobic007G152800 Sobic002G337800 Sobic002G337800 Sobic001G127800--Sobic002G337800 Sobic009G072200 Sobic009G072200 Sobic001G127800--Sobic009G072200 Sobic009G073000 Sobic009G073000 Sobic001G127800--Sobic009G073000 Sobic001G342600 Sobic001G342600 Sobic001G127800--Sobic001G342600 Sobic006G064800 Sobic006G064800 Sobic001G127800--Sobic006G064800 Sobic003G209600 Sobic003G209600 Sobic001G127800--Sobic003G209600 Sobic005G121200--Sobic001G127800 Sobic001G460300 Sobic001G460300 Sobic005G121200--Sobic001G460300 Sobic005G121200--Sobic002G337800 Sobic003G278700 Sobic003G278700 Sobic005G121200--Sobic003G278700 Sobic009G030200 Sobic009G030200 Sobic005G121200--Sobic009G030200 Sobic001G396400 Sobic001G396400 Sobic005G121200--Sobic001G396400 Sobic003G198200 Sobic003G198200 Sobic005G121200--Sobic003G198200 Sobic005G121200--Sobic007G152800 Sobic003G198150 Sobic003G198150 Sobic005G121200--Sobic003G198150 Sobic010G165200--Sobic001G127800 Sobic010G165200--Sobic007G152800 Sobic010G165200--Sobic009G072200 Sobic010G165200--Sobic005G121200 Sobic004G333100 Sobic004G333100 Sobic010G165200--Sobic004G333100 Sobic001G132800 Sobic001G132800 Sobic010G165200--Sobic001G132800 Sobic007G054500 Sobic007G054500 Sobic010G165200--Sobic007G054500 Sobic001G048900 Sobic001G048900 Sobic010G165200--Sobic001G048900 Sobic010G165200--Sobic006G064800 Sobic007G152800--Sobic010G165200 Sobic007G152800--Sobic005G121200 Sobic007G152800--Sobic001G127800 Sobic007G152800--Sobic001G048900 Sobic002G359000 Sobic002G359000 Sobic007G152800--Sobic002G359000 Sobic008G087500 Sobic008G087500 Sobic007G152800--Sobic008G087500 Sobic003G244100 Sobic003G244100 Sobic007G152800--Sobic003G244100 Sobic007G152800--Sobic009G072200 Sobic002G173800 Sobic002G173800 Sobic007G152800--Sobic002G173800 Sobic005G231700 Sobic005G231700 Sobic002G337800--Sobic005G231700 Sobic008G159100 Sobic008G159100 Sobic002G337800--Sobic008G159100 Sobic006G087900 Sobic006G087900 Sobic002G337800--Sobic006G087900 Sobic001G063600 Sobic001G063600 Sobic002G337800--Sobic001G063600 Sobic007G057100 Sobic007G057100 Sobic002G337800--Sobic007G057100 Sobic001G051800 Sobic001G051800 Sobic002G337800--Sobic001G051800 Sobic002G210300 Sobic002G210300 Sobic002G337800--Sobic002G210300 Sobic008G000500 Sobic008G000500 Sobic002G337800--Sobic008G000500 Sobic002G337800--Sobic005G121200 Sobic002G164960 Sobic002G164960 Sobic009G072200--Sobic002G164960 Sobic009G072200--Sobic010G165200 Sobic009G072200--Sobic001G127800 Sobic009G257700 Sobic009G257700 Sobic009G072200--Sobic009G257700 Sobic006G000300 Sobic006G000300 Sobic009G072200--Sobic006G000300 Sobic009G072200--Sobic006G064800 Sobic002G075800 Sobic002G075800 Sobic009G072200--Sobic002G075800 Sobic009G072200--Sobic007G152800 Sobic009G072200--Sobic002G173800 Sobic009G073000--Sobic006G087900 Sobic003G188000 Sobic003G188000 Sobic009G073000--Sobic003G188000 Sobic009G073000--Sobic005G231700 Sobic002G362900 Sobic002G362900 Sobic009G073000--Sobic002G362900 Sobic009G073000--Sobic006G064800 Sobic010G071700 Sobic010G071700 Sobic009G073000--Sobic010G071700 Sobic009G073000--Sobic001G063600 Sobic003G225900 Sobic003G225900 Sobic009G073000--Sobic003G225900 Sobic002G293300 Sobic002G293300 Sobic009G073000--Sobic002G293300 Sobic006G025300 Sobic006G025300 Sobic001G342600--Sobic006G025300 Sobic007G178200 Sobic007G178200 Sobic001G342600--Sobic007G178200 Sobic006G191100 Sobic006G191100 Sobic001G342600--Sobic006G191100 Sobic003G056500 Sobic003G056500 Sobic001G342600--Sobic003G056500 Sobic001G342600--Sobic003G278700 Sobic005G094200 Sobic005G094200 Sobic001G342600--Sobic005G094200 Sobic006G267700 Sobic006G267700 Sobic001G342600--Sobic006G267700 Sobic001G342600--Sobic002G359000 Sobic002G306000 Sobic002G306000 Sobic001G342600--Sobic002G306000 Sobic006G064800--Sobic006G087900 Sobic005G195600 Sobic005G195600 Sobic006G064800--Sobic005G195600 Sobic003G374700 Sobic003G374700 Sobic006G064800--Sobic003G374700 Sobic006G064800--Sobic002G362900 Sobic010G161450 Sobic010G161450 Sobic006G064800--Sobic010G161450 Sobic001G012800 Sobic001G012800 Sobic006G064800--Sobic001G012800 Sobic006G064800--Sobic001G051800 Sobic010G236500 Sobic010G236500 Sobic006G064800--Sobic010G236500 Sobic006G064800--Sobic009G073000 Sobic003G209600--Sobic001G127800 Sobic005G061000 Sobic005G061000 Sobic003G209600--Sobic005G061000 Sobic003G209600--Sobic005G121200 Sobic003G209600--Sobic006G064800 Sobic003G209600--Sobic010G165200 Sobic002G388400 Sobic002G388400 Sobic003G209600--Sobic002G388400 Sobic003G209600--Sobic002G337800 Sobic003G209600--Sobic009G073000 Sobic003G209600--Sobic007G152800
Octagon: transcription factors


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